FFCP PHASE1:Hg19::chr15:71839664..71839680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79875 | |EntrezGene=79875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25835 | |HGNC=25835 | ||
|TSSclassifier=strong | |||
|UniProt=B4DR13 | |UniProt=B4DR13 | ||
|association_with_transcript=89bp_to_ENST00000345002,ENST00000357769_5end | |association_with_transcript=89bp_to_ENST00000345002,ENST00000357769_5end | ||
|cluster_id=chr15:71839664..71839680,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_5_at_THSD4_5end | |description=CAGE_peak_5_at_THSD4_5end | ||
|id=chr15:71839664..71839680,+ | |id=chr15:71839664..71839680,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.08e-34;3!UBERON:0009143;3.15e-26;1!UBERON:0005425;7.62e-26;1!UBERON:0006241;1.53e-09;3!UBERON:0003057;1.53e-09;3!UBERON:0009847;1.53e-09;3!UBERON:0003353;1.53e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-58!115;UBERON:0001049!8.22e-22!57;UBERON:0005068!8.22e-22!57;UBERON:0006241!8.22e-22!57;UBERON:0007135!8.22e-22!57;UBERON:0003075!1.20e-19!86;UBERON:0007284!1.20e-19!86;UBERON:0002346!1.97e-18!90;UBERON:0005743!7.18e-18!86;UBERON:0002780!1.71e-17!41;UBERON:0001890!1.71e-17!41;UBERON:0006240!1.71e-17!41;UBERON:0001017!2.06e-17!82;UBERON:0003080!5.66e-17!42;UBERON:0000073!5.77e-17!94;UBERON:0001016!5.77e-17!94;UBERON:0002616!6.48e-17!59;UBERON:0000955!6.31e-15!69;UBERON:0006238!6.31e-15!69;UBERON:0001893!7.04e-15!34;UBERON:0002791!1.84e-13!33;UBERON:0002020!5.26e-13!34;UBERON:0003528!5.26e-13!34;UBERON:0001869!6.47e-12!32;UBERON:0003056!8.66e-12!61;UBERON:0004121!5.67e-11!169;UBERON:0000924!1.60e-10!173;UBERON:0006601!1.60e-10!173;UBERON:0000153!2.32e-10!129;UBERON:0007811!2.32e-10!129;UBERON:0000033!3.47e-10!123;UBERON:0001950!3.55e-10!20;UBERON:0000062!7.13e-10!511;UBERON:0002619!4.02e-09!22;UBERON:0004111!7.65e-09!241;UBERON:0000956!7.53e-08!25;UBERON:0000203!7.53e-08!25;UBERON:0002308!2.90e-07!9;UBERON:0000125!2.90e-07!9;UBERON:0000025!5.13e-07!194;UBERON:0000477!5.27e-07!286;UBERON:0000200!5.86e-07!6;UBERON:0002360!9.10e-07!2;UBERON:0000094!9.10e-07!2;UBERON:0007645!9.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;7.62e-26;1!UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2!UBERON:0001043;1.14e-09;3!UBERON:0002240;1.53e-09;3!UBERON:0005174;1.53e-09;3!UBERON:0001137;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.26e-25,1;UBERON:0001785,1.26e-25,1;UBERON:0002464,1.26e-25,1;UBERON:0004904,1.26e-25,1;UBERON:0001021,1.26e-25,1;UBERON:0003902,1.26e-25,1;UBERON:0005425,1.26e-25,1;UBERON:0000966,2.01e-17,6;UBERON:0005388,2.01e-17,6;UBERON:0001802,2.01e-17,6;UBERON:0003714,1.55e-13,2;UBERON:0005162,1.55e-13,2;UBERON:0000122,1.55e-13,2;UBERON:0001043,1.10e-09,3;UBERON:0009143,1.10e-09,3;UBERON:0002240,1.41e-09,3;UBERON:0005174,1.41e-09,3;UBERON:0001137,1.41e-09,3;UBERON:0001781,2.04e-07,4 | |||
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| ||
|short_description=p5@THSD4 | |short_description=p5@THSD4 | ||
}} | }} |
Latest revision as of 21:45, 18 September 2015
Short description: | p5@THSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_THSD4_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 89bp_to_ENST00000345002, ENST00000357769_5end |
EntrezGene: | THSD4 |
HGNC: | 25835 |
UniProt: | B4DR13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.26e-25 | 1 |
cranial nerve | 1.26e-25 | 1 |
nerve trunk | 1.26e-25 | 1 |
nerve connecting eye with brain | 1.26e-25 | 1 |
nerve | 1.26e-25 | 1 |
retinal neural layer | 1.26e-25 | 1 |
presumptive neural retina | 1.26e-25 | 1 |
retina | 2.01e-17 | 6 |
photoreceptor array | 2.01e-17 | 6 |
posterior segment of eyeball | 2.01e-17 | 6 |
neural tissue | 1.55e-13 | 2 |
multi cell component structure | 1.55e-13 | 2 |
neuron projection bundle | 1.55e-13 | 2 |
esophagus | 1.10e-09 | 3 |
esophageal region | 1.10e-09 | 3 |
spinal cord | 1.41e-09 | 3 |
dorsal region element | 1.41e-09 | 3 |
dorsum | 1.41e-09 | 3 |
layer of retina | 2.04e-07 | 4 |