FFCP PHASE1:Hg19::chr1:6479968..6479986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54626 | |EntrezGene=54626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16005 | |HGNC=16005 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y543,A2RTZ9 | |UniProt=Q9Y543,A2RTZ9 | ||
|association_with_transcript=0bp_to_ENST00000377834,ENST00000489730,NM_019089,uc001amx.2_5end | |association_with_transcript=0bp_to_ENST00000377834,ENST00000489730,NM_019089,uc001amx.2_5end | ||
|cluster_id=chr1:6479968..6479986,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_1_at_HES2_5end | |description=CAGE_peak_1_at_HES2_5end | ||
|id=chr1:6479968..6479986,- | |id=chr1:6479968..6479986,- | ||
|ontology_enrichment_celltype=CL:0000066!1.24e-59!254;CL:0000076!3.56e-24!62;CL:0002076!7.24e-20!43;CL:0002321!4.99e-19!248;CL:0000220!1.90e-18!246;CL:0000223!4.91e-16!59;CL:0002139!3.29e-14!24;CL:0002078!1.24e-12!44;CL:0000213!1.42e-12!57;CL:0000215!1.42e-12!57;CL:0000115!2.15e-12!35;CL:0000071!6.38e-12!18;CL:0002546!6.38e-12!18;CL:0002368!2.05e-09!13;CL:0002251!1.26e-08!21;CL:0002159!1.92e-08!13;CL:1000413!1.15e-07!9;CL:0002077!7.72e-07!33 | |ontology_enrichment_celltype=CL:0000066!1.24e-59!254;CL:0000076!3.56e-24!62;CL:0002076!7.24e-20!43;CL:0002321!4.99e-19!248;CL:0000220!1.90e-18!246;CL:0000223!4.91e-16!59;CL:0002139!3.29e-14!24;CL:0002078!1.24e-12!44;CL:0000213!1.42e-12!57;CL:0000215!1.42e-12!57;CL:0000115!2.15e-12!35;CL:0000071!6.38e-12!18;CL:0002546!6.38e-12!18;CL:0002368!2.05e-09!13;CL:0002251!1.26e-08!21;CL:0002159!1.92e-08!13;CL:1000413!1.15e-07!9;CL:0002077!7.72e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.18e-18;24!CL:0000071;8.24e-15;18!CL:0002076;2.31e-14;42!CL:0000115;4.03e-14;36!CL:0000076;8.76e-14;63!CL:0002078;4.99e-12;45!CL:0002368;3.41e-10;13!CL:1000413;4.33e-10;9!CL:0002159;2.49e-09;14!CL:0002251;4.13e-09;20!CL:0000213;8.84e-09;58!CL:0000215;8.84e-09;58!CL:0002544;3.67e-07;6!CL:0000066;5.53e-07;253 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.84e-59,253;CL:0000076,3.22e-27,63;CL:0002076,1.38e-19,42;CL:0002139,5.02e-18,24;CL:0002078,8.57e-18,45;CL:0000115,9.66e-17,36;CL:0002321,1.27e-16,250;CL:0000223,4.36e-16,58;CL:0000213,7.23e-15,58;CL:0000215,7.23e-15,58;CL:0000071,8.73e-15,18;CL:0002546,8.73e-15,18;CL:0002368,3.30e-10,13;CL:1000413,4.36e-10,9;CL:0002159,2.49e-09,14;CL:0002251,5.26e-09,20;CL:0002544,3.66e-07,6;CL:0002077,5.87e-07,34 | |||
|ontology_enrichment_development_v019=CL:0002546;8.24e-15;18!CL:0000223;2.28e-09;58 | |||
|ontology_enrichment_disease=DOID:305!6.15e-17!106;DOID:0050687!7.51e-12!143;DOID:1749!5.67e-09!14 | |ontology_enrichment_disease=DOID:305!6.15e-17!106;DOID:0050687!7.51e-12!143;DOID:1749!5.67e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.91e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.63e-12,14;DOID:305,8.24e-11,106;DOID:0050687,1.71e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.19e-14!169;UBERON:0000925!3.19e-14!169;UBERON:0006595!3.19e-14!169;UBERON:0000487!1.30e-12!22;UBERON:0001004!1.35e-12!72;UBERON:0001986!6.38e-12!18;UBERON:0004638!6.38e-12!18;UBERON:0004852!6.38e-12!18;UBERON:0006914!2.82e-11!25;UBERON:0000065!4.84e-11!53;UBERON:0001007!8.75e-10!155;UBERON:0001555!8.75e-10!155;UBERON:0007026!8.75e-10!155;UBERON:0004921!2.08e-09!129;UBERON:0004185!2.08e-09!129;UBERON:0000077!3.63e-09!130;UBERON:0006554!4.32e-09!44;UBERON:0000464!5.78e-09!104;UBERON:0008947!9.10e-09!38;UBERON:0003258!9.10e-09!38;UBERON:0000072!1.20e-08!46;UBERON:0001008!1.28e-08!45;UBERON:0003064!4.52e-08!37;UBERON:0001041!9.87e-08!98;UBERON:0003915!1.15e-07!9;UBERON:0004700!1.15e-07!9;UBERON:0001917!1.15e-07!9;UBERON:0000468!2.52e-07!659;UBERON:0000466!3.22e-07!126;UBERON:0000064!4.83e-07!219;UBERON:0004876!5.28e-07!20;UBERON:0000480!6.84e-07!626;UBERON:0005153!8.14e-07!37;UBERON:0000467!8.31e-07!625 | |ontology_enrichment_uberon=UBERON:0004119!3.19e-14!169;UBERON:0000925!3.19e-14!169;UBERON:0006595!3.19e-14!169;UBERON:0000487!1.30e-12!22;UBERON:0001004!1.35e-12!72;UBERON:0001986!6.38e-12!18;UBERON:0004638!6.38e-12!18;UBERON:0004852!6.38e-12!18;UBERON:0006914!2.82e-11!25;UBERON:0000065!4.84e-11!53;UBERON:0001007!8.75e-10!155;UBERON:0001555!8.75e-10!155;UBERON:0007026!8.75e-10!155;UBERON:0004921!2.08e-09!129;UBERON:0004185!2.08e-09!129;UBERON:0000077!3.63e-09!130;UBERON:0006554!4.32e-09!44;UBERON:0000464!5.78e-09!104;UBERON:0008947!9.10e-09!38;UBERON:0003258!9.10e-09!38;UBERON:0000072!1.20e-08!46;UBERON:0001008!1.28e-08!45;UBERON:0003064!4.52e-08!37;UBERON:0001041!9.87e-08!98;UBERON:0003915!1.15e-07!9;UBERON:0004700!1.15e-07!9;UBERON:0001917!1.15e-07!9;UBERON:0000468!2.52e-07!659;UBERON:0000466!3.22e-07!126;UBERON:0000064!4.83e-07!219;UBERON:0004876!5.28e-07!20;UBERON:0000480!6.84e-07!626;UBERON:0005153!8.14e-07!37;UBERON:0000467!8.31e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.24e-15;18!UBERON:0001986;8.24e-15;18!UBERON:0004852;8.24e-15;18!UBERON:0000487;9.84e-14;22!UBERON:0006914;9.27e-13;25!UBERON:0000490;2.41e-11;33!UBERON:0003915;4.33e-10;9!UBERON:0004700;4.33e-10;9!UBERON:0001917;4.33e-10;9!UBERON:0000486;3.26e-07;12!UBERON:0000353;9.82e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.73e-15,18;UBERON:0001986,8.73e-15,18;UBERON:0004852,8.73e-15,18;UBERON:0000487,9.41e-14,22;UBERON:0006914,8.97e-13,25;UBERON:0004119,7.03e-11,160;UBERON:0000925,7.03e-11,160;UBERON:0006595,7.03e-11,160;UBERON:0001004,2.29e-10,74;UBERON:0003915,4.36e-10,9;UBERON:0004700,4.36e-10,9;UBERON:0001917,4.36e-10,9;UBERON:0003124,4.08e-08,7;UBERON:0000065,4.37e-08,54;UBERON:0006554,1.05e-07,47;UBERON:0001008,2.16e-07,48 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.522371256399677,6.88055022204225,13.2582221914761,3.27662058195258,11.3419800638235,0.123766352960047,0,1.34465029290355,1.20538905604795,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.410502947249729,0,0,0,0.154816123316076,94.7003861213295,79.518362557458,68.7742458910225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.589405839739707,115.117311100443,104.561212865209,0.324547393654683,0.348259474598534,3.32394901297163,0,0,0,17.6898542556368,43.0117297553062,29.8540831382531,29.3960129800485,50.7594317813986,48.4207753814519,34.0661795455001,7.49408601591054,2.13459757612026,1.33888245105868,26.1839056120946,41.0546937087997,11.7149787623121,20.9567955797145,70.4823494657131,0.535798369704479,1.34717623575702,1.46394924628319,45.994991239765,23.7316414892032,42.3196028479241,0,0,123.85071080848,0,0.759783069987479,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.808264032418128,0.490385709340376,0,0,0,0,7.41613368007784,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.10716346502,60.2768926505745,76.003217778086,1.95157929807353,1.72288698817931,1.16193942869518,5.59769697083,1.26160425437814,2.91981887260664,0,0,0,0,0.721879481669586,2.12952240071719,2.52877035117153,1.44606617930089,1.65440959098591,1.96091499683166,0.949082476444386,2.42696354688296,2.15843611637881,0.769494313892781,9.59602091012043,8.41450642820675,0,0,0,0,0,0,0.491953754172454,0,162.10117154854,57.324894161386,14.978816889333,33.9799593731804,0,0,0,2.78232971940184,0.117408694235822,6.20775725372617,4.1668696131895,3.80508304469197,3.95102198979638,1.71697232418975,0,2.10603838625314,1.18904929830983,141.538089320033,60.8095304079872,55.4340630217731,27.4049079470716,36.9105101912732,82.0438933413552,0,0,1.4512968087854,0.432359860250884,0.12624243342638,0.190493682876507,0.381988425558278,0,10.2643467613623,0,1.8020583470635,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,1.15825045334063,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,7.88131685760275,28.2940247167845,7.25736703991233,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,2.1754700926492,165.818850940817,135.174891757896,0.114814448164607,0,0.393373244878272,11.2799903226853,8.54870241859004,0.784349769176855,5.84556898613043,3.37765212457202,6.8240030442538,14.4579649485038,0.863663664408557,1.54227252690289,0,2.00675909541941,4.58777291481069,6.64860807142979,1.56712328305525,0,0,0,0,0,16.1774388286924,0.0915694648183434,0,44.2184464257053,59.1554823893234,1.6068392984416,0,0,0.307007349452259,0.413509717453592,0,0,0.511359764496605,0.178064071293475,93.0554073482307,86.1011501795676,52.5764375477687,91.1431605508505,0,0.31481234683064,0,1.23213432070436,0,0,0.37064843820784,0.572499546967965,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0.404364963146632,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,34.9286269193609,68.3708321046503,59.8900416737274,16.7575965382667,129.58211717404,149.939613344187,134.359336521613,72.3628710651922,0,0,0,0,0,0,0,0,0.320472213382419,0,46.557641036396,0,0.28853842595289,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0,0,0,0,0,0,0,7.48562161632879,0.586032717087576,0.242721043499027,0,0.284136146806413,7.63982351160608,0.890894042497916,0.614321404198464,0,0,0,0,1.90012867315194,0,0.552567831062295,0,0.409074730008619,0,0.311039587661807,3.50486569474575,0.179021174675609,0,0,0,0,0,0,0,1.04171104434093,0,0,8.87588896626897,0.762760950878299,0.709163045303809,7.92909758455369,0,4.5142498682656,0,0,0,0,0,0.219385397153973,0.980446171670911,55.7694977114413,6.46382171431895,0,8.53086446235823,7.18061155278177,1.52106320690811,64.4382342658477,64.3931081615092,96.4792944593729,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.282706142867882,0,14.9289289661776,2.0345239835768,8.55442202907076,0,0.123563938946503,0.208843899010911,0,0,0,0,14.4791818009746,1.69946265673865,0,0,0,0.252746318513952,0.450970258243478,0.207376382794494,0,0.661983911750998,0.313932918407225,0,0.284609546029793,1.8027707491708,88.3419068125816,30.0836660062139,27.684827692568,0.17472666824203,0.343972064943233,1.35458863804719,1.68105429298227,2.05288642633023,22.889407891267,0,0.90392296312213,0,0,0,7.82205530939212,5.53095859735583,0,11.7887669653457,1.15272333723285,1.25990255782507,0,2.160821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| 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| ||
|short_description=p1@HES2 | |short_description=p1@HES2 | ||
}} | }} |
Latest revision as of 21:37, 18 September 2015
Short description: | p1@HES2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HES2_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 0bp_to_ENST00000377834, ENST00000489730, NM_019089, uc001amx.2_5end |
EntrezGene: | HES2 |
HGNC: | 16005 |
UniProt: | Q9Y543A2RTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.84e-59 | 253 |
squamous epithelial cell | 3.22e-27 | 63 |
endo-epithelial cell | 1.38e-19 | 42 |
endothelial cell of vascular tree | 5.02e-18 | 24 |
meso-epithelial cell | 8.57e-18 | 45 |
endothelial cell | 9.66e-17 | 36 |
embryonic cell | 1.27e-16 | 250 |
endodermal cell | 4.36e-16 | 58 |
lining cell | 7.23e-15 | 58 |
barrier cell | 7.23e-15 | 58 |
blood vessel endothelial cell | 8.73e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.73e-15 | 18 |
respiratory epithelial cell | 3.30e-10 | 13 |
endothelial cell of artery | 4.36e-10 | 9 |
general ecto-epithelial cell | 2.49e-09 | 14 |
epithelial cell of alimentary canal | 5.26e-09 | 20 |
aortic endothelial cell | 3.66e-07 | 6 |
ecto-epithelial cell | 5.87e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.73e-15 | 18 |
endothelium | 8.73e-15 | 18 |
cardiovascular system endothelium | 8.73e-15 | 18 |
simple squamous epithelium | 9.41e-14 | 22 |
squamous epithelium | 8.97e-13 | 25 |
endoderm-derived structure | 7.03e-11 | 160 |
endoderm | 7.03e-11 | 160 |
presumptive endoderm | 7.03e-11 | 160 |
respiratory system | 2.29e-10 | 74 |
endothelial tube | 4.36e-10 | 9 |
arterial system endothelium | 4.36e-10 | 9 |
endothelium of artery | 4.36e-10 | 9 |
chorion | 4.08e-08 | 7 |
respiratory tract | 4.37e-08 | 54 |
urinary system structure | 1.05e-07 | 47 |
renal system | 2.16e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.63e-12 | 14 |
carcinoma | 8.24e-11 | 106 |
cell type cancer | 1.71e-08 | 143 |