FFCP PHASE1:Hg19::chr5:78809922..78809946,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:78809922..78809946,- to FFCP PHASE1:Hg19::chr5:78809922..78809946,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9456 | |EntrezGene=9456 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17512 | |HGNC=17512 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YM7 | |UniProt=Q86YM7 | ||
|association_with_transcript=93bp_to_ENST00000334082_5end | |||
|cluster_id=chr5:78809922..78809946,- | |||
|description=CAGE_peak_2_at_HOMER1_5end | |||
|id=chr5:78809922..78809946,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.00e-17!235;DOID:14566!4.30e-17!239;DOID:0050687!8.39e-15!143;DOID:305!1.85e-10!106;DOID:0050686!4.42e-08!137;DOID:3095!8.21e-07!22;DOID:2994!8.21e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.73e-07;22!DOID:2994;9.73e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.86e-17,235;DOID:14566,9.80e-17,239;DOID:0050687,2.16e-14,143;DOID:305,5.56e-10,106;DOID:0050686,3.64e-08,137;DOID:3095,3.99e-07,22;DOID:2994,3.99e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.04e-17!94;UBERON:0001016!1.04e-17!94;UBERON:0005743!2.27e-16!86;UBERON:0001017!2.70e-16!82;UBERON:0000955!7.15e-14!69;UBERON:0006238!7.15e-14!69;UBERON:0000924!2.27e-13!173;UBERON:0006601!2.27e-13!173;UBERON:0001869!9.20e-13!32;UBERON:0004121!1.61e-12!169;UBERON:0001049!2.21e-12!57;UBERON:0005068!2.21e-12!57;UBERON:0006241!2.21e-12!57;UBERON:0007135!2.21e-12!57;UBERON:0002346!6.79e-12!90;UBERON:0001893!1.13e-11!34;UBERON:0002020!1.67e-11!34;UBERON:0003528!1.67e-11!34;UBERON:0002780!2.59e-11!41;UBERON:0001890!2.59e-11!41;UBERON:0006240!2.59e-11!41;UBERON:0002616!2.72e-11!59;UBERON:0002619!2.98e-11!22;UBERON:0002791!3.58e-11!33;UBERON:0003080!4.25e-11!42;UBERON:0003075!5.42e-11!86;UBERON:0007284!5.42e-11!86;UBERON:0000033!1.43e-10!123;UBERON:0001950!2.47e-10!20;UBERON:0000153!2.62e-10!129;UBERON:0007811!2.62e-10!129;UBERON:0000956!3.12e-10!25;UBERON:0000203!3.12e-10!25;UBERON:0003056!2.47e-09!61;UBERON:0000475!1.31e-08!365;UBERON:0000119!2.70e-08!312;UBERON:0000483!3.31e-08!309;UBERON:0000481!5.04e-08!347;UBERON:0000064!1.25e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.49e-12;32!UBERON:0002619;1.25e-11;22!UBERON:0002791;1.45e-11;32!UBERON:0003528;6.54e-11;34!UBERON:0002020;6.54e-11;34!UBERON:0000956;8.01e-11;25!UBERON:0000203;8.01e-11;25!UBERON:0001950;1.19e-10;20!UBERON:0001893;1.54e-10;34!UBERON:0002780;1.17e-08;41!UBERON:0001890;1.17e-08;41!UBERON:0000073;2.19e-07;53!UBERON:0002616;2.19e-07;53!UBERON:0000955;2.26e-07;68!UBERON:0001016;2.60e-07;83!UBERON:0001017;2.84e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.28e-18,89;UBERON:0001017,1.36e-16,81;UBERON:0000955,3.41e-14,68;UBERON:0006238,3.41e-14,68;UBERON:0001869,2.18e-13,32;UBERON:0000073,6.83e-13,53;UBERON:0002616,6.83e-13,53;UBERON:0001049,7.61e-13,56;UBERON:0005068,7.61e-13,56;UBERON:0006241,7.61e-13,56;UBERON:0007135,7.61e-13,56;UBERON:0002346,2.54e-12,86;UBERON:0002791,2.65e-12,32;UBERON:0004121,3.87e-12,171;UBERON:0000924,3.87e-12,171;UBERON:0006601,3.87e-12,171;UBERON:0003528,4.65e-12,34;UBERON:0002020,4.65e-12,34;UBERON:0001893,5.81e-12,34;UBERON:0011216,7.56e-12,223;UBERON:0002780,8.51e-12,41;UBERON:0001890,8.51e-12,41;UBERON:0003080,8.51e-12,41;UBERON:0006240,8.51e-12,41;UBERON:0002619,8.57e-12,22;UBERON:0003075,2.29e-11,82;UBERON:0007284,2.29e-11,82;UBERON:0001950,8.00e-11,20;UBERON:0000956,1.02e-10,25;UBERON:0000203,1.02e-10,25;UBERON:0010371,7.20e-10,104;UBERON:0003056,3.09e-09,61;UBERON:0010314,7.73e-09,132;UBERON:0000119,6.17e-07,309;UBERON:0000483,7.50e-07,306 | |||
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| ||
|short_description=p2@HOMER1 | |||
}} | }} |
Latest revision as of 21:27, 18 September 2015
Short description: | p2@HOMER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOMER1_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000334082_5end |
EntrezGene: | HOMER1 |
HGNC: | 17512 |
UniProt: | Q86YM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 3.86e-17 | 235 |
disease of cellular proliferation | 9.80e-17 | 239 |
cell type cancer | 2.16e-14 | 143 |
carcinoma | 5.56e-10 | 106 |
organ system cancer | 3.64e-08 | 137 |
germ cell and embryonal cancer | 3.99e-07 | 22 |
germ cell cancer | 3.99e-07 | 22 |