FFCP PHASE1:Hg19::chr18:13611431..13611469,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:13611431..13611469,+ to FFCP PHASE1:Hg19::chr18:13611431..13611469,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=753 | |EntrezGene=753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1224 | |HGNC=1224 | ||
|TSSclassifier=strong | |||
|UniProt=B3KNT9,E9PAY9,O15165 | |UniProt=B3KNT9,E9PAY9,O15165 | ||
|association_with_transcript=-195bp_to_ENST00000359446,ENST00000399847,NM_001003674,NM_001003675,uc002kse.2,uc002ksf.2_5end | |||
|cluster_id=chr18:13611431..13611469,+ | |||
|description=CAGE_peak_4_at_C18orf1_5end | |||
|id=chr18:13611431..13611469,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.08e-21!140;CL:0002057!1.68e-18!42;CL:0002031!6.42e-17!124;CL:0002087!9.64e-17!119;CL:0000860!1.50e-16!45;CL:0000988!8.09e-16!182;CL:0000037!1.26e-15!172;CL:0000566!1.26e-15!172;CL:0002032!1.63e-12!165;CL:0000837!1.63e-12!165;CL:0000557!2.60e-12!71;CL:0002009!7.80e-12!65;CL:0000766!1.25e-11!76;CL:0000839!1.51e-10!70;CL:0002194!2.34e-10!63;CL:0000576!2.34e-10!63;CL:0000040!2.34e-10!63;CL:0000559!2.34e-10!63;CL:0002393!1.93e-09!9;CL:0002397!1.93e-09!9;CL:0000763!1.20e-07!112;CL:0000049!1.20e-07!112;CL:0000080!1.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.03e-08;6!CL:0002397;1.03e-08;6!CL:0000784;1.80e-08;3!CL:0000623;5.62e-08;3!CL:0000767;8.01e-08;3!CL:0000226;5.62e-07;3!CL:0000842;5.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.81e-13,136;CL:0000988,1.44e-10,177;CL:0002393,3.38e-10,9;CL:0002397,3.38e-10,9;CL:0000037,2.30e-09,168;CL:0002087,1.01e-08,115;CL:0000784,1.77e-08,3;CL:0002031,3.43e-08,120;CL:0000623,4.97e-08,3;CL:0000825,4.97e-08,3;CL:0000767,7.01e-08,3;CL:0000226,5.58e-07,3;CL:0000842,5.58e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.87e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.25e-28!115;UBERON:0001049!3.58e-24!57;UBERON:0005068!3.58e-24!57;UBERON:0006241!3.58e-24!57;UBERON:0007135!3.58e-24!57;UBERON:0002616!6.79e-20!59;UBERON:0002020!2.76e-19!34;UBERON:0003528!2.76e-19!34;UBERON:0001893!2.83e-19!34;UBERON:0002780!2.97e-19!41;UBERON:0001890!2.97e-19!41;UBERON:0006240!2.97e-19!41;UBERON:0001017!5.46e-19!82;UBERON:0003080!1.51e-18!42;UBERON:0002791!2.59e-18!33;UBERON:0005743!3.46e-18!86;UBERON:0003075!2.78e-17!86;UBERON:0007284!2.78e-17!86;UBERON:0001869!3.67e-17!32;UBERON:0000955!4.96e-17!69;UBERON:0006238!4.96e-17!69;UBERON:0000073!4.27e-16!94;UBERON:0001016!4.27e-16!94;UBERON:0002346!7.79e-16!90;UBERON:0002390!3.29e-13!102;UBERON:0003061!3.29e-13!102;UBERON:0002619!3.91e-13!22;UBERON:0001950!4.67e-13!20;UBERON:0001474!1.32e-11!86;UBERON:0002371!2.74e-11!80;UBERON:0003056!4.14e-11!61;UBERON:0002308!4.99e-11!9;UBERON:0000125!4.99e-11!9;UBERON:0000956!6.34e-11!25;UBERON:0000203!6.34e-11!25;UBERON:0002193!9.54e-11!112;UBERON:0002420!1.08e-10!9;UBERON:0007245!1.08e-10!9;UBERON:0010009!1.08e-10!9;UBERON:0010011!1.08e-10!9;UBERON:0000454!1.08e-10!9;UBERON:0004765!8.00e-09!101;UBERON:0001434!8.00e-09!101;UBERON:0009663!8.40e-09!7;UBERON:0000153!2.30e-08!129;UBERON:0007811!2.30e-08!129;UBERON:0002298!6.14e-08!8;UBERON:0000200!3.68e-07!6;UBERON:0000033!4.57e-07!123;UBERON:0002405!7.52e-07!115;UBERON:0003076!7.71e-07!15;UBERON:0003057!7.71e-07!15;UBERON:0004732!9.73e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.23e-25;34!UBERON:0003528;1.10e-23;34!UBERON:0002020;1.10e-23;34!UBERON:0002791;6.34e-23;32!UBERON:0001869;2.92e-22;32!UBERON:0000073;2.37e-21;53!UBERON:0002616;2.37e-21;53!UBERON:0002780;3.37e-21;41!UBERON:0001890;3.37e-21;41!UBERON:0002619;2.25e-19;22!UBERON:0001950;8.77e-19;20!UBERON:0000956;1.18e-16;25!UBERON:0000203;1.18e-16;25!UBERON:0000125;1.74e-15;9!UBERON:0002308;1.74e-15;9!UBERON:0002420;1.07e-14;9!UBERON:0007245;1.07e-14;9!UBERON:0010009;1.07e-14;9!UBERON:0010011;1.07e-14;9!UBERON:0000454;1.07e-14;9!UBERON:0002298;8.72e-14;6!UBERON:0000955;2.80e-13;68!UBERON:0001017;3.02e-13;75!UBERON:0009663;1.72e-11;7!UBERON:0001016;4.77e-11;83!UBERON:0004732;3.09e-10;13!UBERON:0007023;3.11e-09;114!UBERON:0000200;1.62e-08;6!UBERON:0004733;1.87e-08;12!UBERON:0002028;1.87e-08;12!UBERON:0000988;8.01e-08;3!UBERON:0001896;1.24e-07;3!UBERON:0005290;1.24e-07;3!UBERON:0002021;5.18e-07;5!UBERON:0001871;5.27e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.02e-41,56;UBERON:0005068,7.02e-41,56;UBERON:0006241,7.02e-41,56;UBERON:0007135,7.02e-41,56;UBERON:0000073,2.23e-38,53;UBERON:0002616,2.23e-38,53;UBERON:0001017,1.69e-31,81;UBERON:0000955,3.49e-31,68;UBERON:0006238,3.49e-31,68;UBERON:0002780,3.70e-31,41;UBERON:0001890,3.70e-31,41;UBERON:0003080,3.70e-31,41;UBERON:0006240,3.70e-31,41;UBERON:0003528,1.28e-29,34;UBERON:0002020,1.28e-29,34;UBERON:0001893,1.34e-29,34;UBERON:0001016,3.75e-29,89;UBERON:0003075,3.15e-28,82;UBERON:0007284,3.15e-28,82;UBERON:0002346,2.03e-26,86;UBERON:0002791,4.86e-26,32;UBERON:0001869,7.32e-26,32;UBERON:0007023,6.18e-24,114;UBERON:0003056,2.16e-20,61;UBERON:0010371,5.10e-20,104;UBERON:0002619,1.12e-19,22;UBERON:0001950,4.53e-19,20;UBERON:0000956,6.48e-17,25;UBERON:0000203,6.48e-17,25;UBERON:0000125,1.28e-15,9;UBERON:0002308,1.28e-15,9;UBERON:0010314,1.48e-15,132;UBERON:0002420,4.60e-15,9;UBERON:0007245,4.60e-15,9;UBERON:0010009,4.60e-15,9;UBERON:0010011,4.60e-15,9;UBERON:0000454,4.60e-15,9;UBERON:0002298,1.02e-13,6;UBERON:0009663,1.36e-11,7;UBERON:0004121,6.73e-11,171;UBERON:0000924,6.73e-11,171;UBERON:0006601,6.73e-11,171;UBERON:0003076,1.15e-10,15;UBERON:0003057,1.15e-10,15;UBERON:0004732,3.82e-10,13;UBERON:0000200,1.10e-08,6;UBERON:0004733,2.29e-08,12;UBERON:0002028,2.29e-08,12;UBERON:0007277,2.29e-08,12;UBERON:0000988,7.86e-08,3;UBERON:0001896,1.48e-07,3;UBERON:0005290,1.48e-07,3;UBERON:0010096,1.48e-07,3;UBERON:0002390,1.80e-07,98;UBERON:0003061,1.80e-07,98;UBERON:0001871,2.55e-07,6;UBERON:0011216,4.67e-07,223;UBERON:0002021,4.82e-07,5;UBERON:0000349,4.99e-07,5 | |||
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|short_description=p4@C18orf1 | |||
}} | }} |
Latest revision as of 21:18, 18 September 2015
Short description: | p4@C18orf1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C18orf1_5end |
Coexpression cluster: | NA |
Association with transcript: | -195bp_to_ENST00000359446, ENST00000399847, NM_001003674, NM_001003675, uc002kse.2, uc002ksf.2_5end |
EntrezGene: | C18orf1 |
HGNC: | 1224 |
UniProt: | B3KNT9E9PAY9O15165 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.81e-13 | 136 |
hematopoietic cell | 1.44e-10 | 177 |
intermediate monocyte | 3.38e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.38e-10 | 9 |
hematopoietic stem cell | 2.30e-09 | 168 |
nongranular leukocyte | 1.01e-08 | 115 |
plasmacytoid dendritic cell | 1.77e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 3.43e-08 | 120 |
natural killer cell | 4.97e-08 | 3 |
pro-NK cell | 4.97e-08 | 3 |
basophil | 7.01e-08 | 3 |
single nucleate cell | 5.58e-07 | 3 |
mononuclear cell | 5.58e-07 | 3 |