FFCP PHASE1:Hg19::chr2:182322938..182322962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3676 | |EntrezGene=3676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6140 | |HGNC=6140 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000478440_5end | |association_with_transcript=-5bp_to_ENST00000478440_5end | ||
|cluster_id=chr2:182322938..182322962,+ | |||
|coexpression_cluster_id=C1481 | |||
|description=CAGE_peak_5_at_ITGA4_5end | |description=CAGE_peak_5_at_ITGA4_5end | ||
|id=chr2:182322938..182322962,+ | |id=chr2:182322938..182322962,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.62e-68!172;CL:0000566!5.62e-68!172;CL:0000988!1.43e-64!182;CL:0002032!7.52e-63!165;CL:0000837!7.52e-63!165;CL:0000738!4.48e-52!140;CL:0002031!6.15e-44!124;CL:0002087!5.87e-43!119;CL:0000763!3.24e-31!112;CL:0000049!3.24e-31!112;CL:0000542!1.88e-29!53;CL:0000051!1.88e-29!53;CL:0000838!4.92e-29!52;CL:0002320!4.17e-22!365;CL:0000134!5.70e-22!358;CL:0000766!2.27e-17!76;CL:0000219!3.58e-17!390;CL:0002057!2.73e-16!42;CL:0000557!9.19e-16!71;CL:0000839!1.36e-15!70;CL:0000084!3.18e-15!25;CL:0000827!3.18e-15!25;CL:0000791!9.06e-15!18;CL:0000789!9.06e-15!18;CL:0002420!9.06e-15!18;CL:0002419!9.06e-15!18;CL:0000790!9.06e-15!18;CL:0000860!3.29e-14!45;CL:0002009!1.17e-13!65;CL:0000048!1.85e-13!430;CL:0000034!2.18e-13!444;CL:0002194!3.25e-13!63;CL:0000576!3.25e-13!63;CL:0000040!3.25e-13!63;CL:0000559!3.25e-13!63;CL:0000723!4.66e-13!436;CL:0000945!1.15e-12!24;CL:0000826!1.15e-12!24;CL:0000625!5.76e-11!11;CL:0000236!1.72e-10!14;CL:0002393!9.21e-08!9;CL:0002397!9.21e-08!9 | |ontology_enrichment_celltype=CL:0000037!5.62e-68!172;CL:0000566!5.62e-68!172;CL:0000988!1.43e-64!182;CL:0002032!7.52e-63!165;CL:0000837!7.52e-63!165;CL:0000738!4.48e-52!140;CL:0002031!6.15e-44!124;CL:0002087!5.87e-43!119;CL:0000763!3.24e-31!112;CL:0000049!3.24e-31!112;CL:0000542!1.88e-29!53;CL:0000051!1.88e-29!53;CL:0000838!4.92e-29!52;CL:0002320!4.17e-22!365;CL:0000134!5.70e-22!358;CL:0000766!2.27e-17!76;CL:0000219!3.58e-17!390;CL:0002057!2.73e-16!42;CL:0000557!9.19e-16!71;CL:0000839!1.36e-15!70;CL:0000084!3.18e-15!25;CL:0000827!3.18e-15!25;CL:0000791!9.06e-15!18;CL:0000789!9.06e-15!18;CL:0002420!9.06e-15!18;CL:0002419!9.06e-15!18;CL:0000790!9.06e-15!18;CL:0000860!3.29e-14!45;CL:0002009!1.17e-13!65;CL:0000048!1.85e-13!430;CL:0000034!2.18e-13!444;CL:0002194!3.25e-13!63;CL:0000576!3.25e-13!63;CL:0000040!3.25e-13!63;CL:0000559!3.25e-13!63;CL:0000723!4.66e-13!436;CL:0000945!1.15e-12!24;CL:0000826!1.15e-12!24;CL:0000625!5.76e-11!11;CL:0000236!1.72e-10!14;CL:0002393!9.21e-08!9;CL:0002397!9.21e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.56e-23;25!CL:0000542;1.72e-22;53!CL:0000791;6.47e-22;18!CL:0000789;6.47e-22;18!CL:0002419;6.47e-22;18!CL:0000625;5.14e-16;11!CL:0000945;1.24e-13;24!CL:0002087;2.05e-13;104!CL:0000236;1.51e-12;13!CL:0000988;1.83e-11;177!CL:0000738;1.88e-10;136!CL:0000763;4.20e-09;100!CL:0000576;1.13e-07;48!CL:0002393;2.11e-07;6!CL:0002397;2.11e-07;6!CL:0000624;3.99e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.36e-74,168;CL:0000988,7.15e-70,177;CL:0002032,4.06e-67,161;CL:0000837,4.06e-67,161;CL:0000738,4.17e-53,136;CL:0002087,5.28e-46,115;CL:0002031,8.29e-44,120;CL:0000542,1.10e-39,53;CL:0000051,1.10e-39,53;CL:0000838,4.92e-39,52;CL:0000763,1.05e-27,108;CL:0000049,1.05e-27,108;CL:0000084,2.30e-23,25;CL:0000827,2.30e-23,25;CL:0000134,1.10e-22,354;CL:0000791,6.70e-22,18;CL:0000789,6.70e-22,18;CL:0002420,6.70e-22,18;CL:0002419,6.70e-22,18;CL:0000790,6.70e-22,18;CL:0002320,1.47e-21,361;CL:0000219,1.24e-17,386;CL:0000625,4.89e-16,11;CL:0000945,1.03e-13,24;CL:0000826,1.03e-13,24;CL:0000034,1.20e-13,441;CL:0000236,1.53e-13,14;CL:0000048,2.07e-13,427;CL:0000860,2.09e-13,42;CL:0002057,2.09e-13,42;CL:0000766,6.86e-13,72;CL:0000723,9.05e-13,433;CL:0000473,1.24e-11,48;CL:0000234,1.24e-11,48;CL:0000839,3.51e-11,66;CL:0002393,4.12e-11,9;CL:0002397,4.12e-11,9;CL:0000557,3.15e-10,67;CL:0002194,2.68e-09,59;CL:0000576,2.68e-09,59;CL:0000040,2.68e-09,59;CL:0000559,2.68e-09,59;CL:0002009,9.70e-09,61;CL:0000624,3.67e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.72e-22;53!CL:0000790;6.47e-22;18!CL:0002057;7.67e-10;42!CL:0000049;4.51e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!3.38e-14!51;DOID:0060083!3.38e-14!51;DOID:1240!1.54e-12!39;DOID:8692!7.37e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.09e-12;31!DOID:1240;7.04e-12;39!DOID:2531;4.09e-10;51!DOID:0060083;4.09e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.90e-16,39;DOID:2531,1.98e-15,51;DOID:0060083,1.98e-15,51;DOID:8692,1.09e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-24!102;UBERON:0003061!1.11e-24!102;UBERON:0002384!1.72e-21!375;UBERON:0002193!1.92e-21!112;UBERON:0002371!5.25e-14!80;UBERON:0001474!6.12e-14!86;UBERON:0002405!8.46e-10!115;UBERON:0004765!8.85e-10!101;UBERON:0001434!8.85e-10!101;UBERON:0000178!5.53e-09!15;UBERON:0000179!5.53e-09!15;UBERON:0000463!5.53e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.72e-12;15!UBERON:0000179;1.72e-12;15!UBERON:0000463;1.72e-12;15!UBERON:0002390;1.50e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.17e-21,98;UBERON:0003061,3.17e-21,98;UBERON:0002384,4.98e-20,371;UBERON:0002193,1.48e-18,108;UBERON:0000178,2.24e-12,15;UBERON:0000179,2.24e-12,15;UBERON:0000463,2.24e-12,15;UBERON:0002405,8.07e-11,93;UBERON:0001474,7.28e-09,82;UBERON:0002371,9.68e-09,76;UBERON:0004177,2.73e-08,7;UBERON:0005057,2.73e-08,7;UBERON:0004765,2.87e-07,90 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0.627713197974014,1.52826811495903,1.06730766284929,2.2826126580967,1.57345710739562,15.7370053219857,2.16742572642506,0,0,0,0.387336002901508,1.70603078984906,5.87200878669694,5.53995408531877,2.80762226458198,1.51907609501096,0.671746422719773,1.6194683300949,0.77272670290256,1.16318591023652,0.377875943688809,1.21292030593908,1.39457422143411,0.411167888021826,0.619412741790207,0.863077176966451,2.30544635876191,2.12834006899727,4.13694816883942,2.5819387343353,0,0,0.545812300115692,1.12361742222542,0.918251677112708,0.320929027076094,0.639337125799041,2.63881040149373,1.19678194572979,4.26224750532694,0.580418477257168,1.13477044938228,0,1.50749199154046,3.12889751052121,4.56096573880745,0.605399502633369,1.10483290796269,0.316462387440884,12.0415513197807,12.7562579979026,9.01532175686016,2.2465726229299,4.50530678524519,3.69668849403284,8.26536956849621,17.9025009479181,13.3344832248183,14.0796995569058,10.9227722252426,6.22656477704488,5.9742231159311,8.80871171479227,8.62128659931725,11.2377628373427,8.58648379081828,4.55370375287559,4.69789751496751,3.44045905312706,13.2171328579026,7.8471198817415,6.58460211937693,3.73748563216283,5.50215067848831,4.5232329779892,13.8764791174263,1.30368906653436,4.2610302516126,1.94826728407911,13.5920757399912,6.48132996444642,5.31681347000691,11.9153700056607,6.78883994546078,9.62439171943099,6.9063919933544,9.94860064029054,20.2862160014537,6.96946846861684,7.49114318651197,9.40819714244791,28.3273356743915,12.2630557952615,13.0578429283399,36.4348356508084,19.1139248594458,17.5792532541233,19.0090408889675,14.9069367886995,19.4539648954716,19.9889162483753,22.0202844400936,14.7803039445788,14.9188989986302,16.3138519427939,11.4411279067411,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0.97364218096405,0.348259474598534,0.26591592103773,3.57735936458013,4.0039643754609,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.496971951695318,0,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0,0,0.23486899728753,0.323745888736263,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.453728732640084,0.538168907066586,0.213557388818567,0,0.300091096084402,0.721367704669072,1.54584324027377,0,0.168776332241266,0,0.252433774244115,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71218818712231,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,1.23108503043699,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,1.24396869324463,1.29707958075265,1.76739406796932,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.258543431515556,0,0,1.32969058292435,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.12085143993527,14.7773070151445,8.84073056924021,9.62572772098113,0,0,0,0,0,0.749007023947182,2.99161459204025,2.07207756718018,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0.343143423810856,8.06395301879261,3.23571301227925,5.54983300577911,0,0,0,1.48864684691266,1.38115775959256,0.561320188866147,0,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,3.28889814968902,2.61435451024901,0,0,0.325378394664303,0.309123034943167,3.84591752237042,5.36311749483822,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.255679882248303,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,1.2655176988749,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,8.11916174771471,14.5281069357051,3.41788312304498,8.33811214102261,6.58179636937911,9.07862635669804,16.7409745543816,11.1037524681198,0.106824071127473,0,0,1.30062222588003,2.74111504655245,10.4578509722169,1.59426272728822,2.99369057149225,2.48956981172077,2.32840940996271,2.921597462471,7.01992945283647,3.19528550646469,3.60363760277953,2.50634477090067,4.06300266723848,6.58411107925168,7.87018858045086,6.38769356535489,8.24412827413835,0,0.671028323677248,0.500547425135725,1.17232857241224,1.9488432172667,2.46174797895425,4.8682022125677,3.66379164797602,14.098700508785,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,1.15362711958732,0.63337622438398,0.398495976502139,2.48655523978033,0,0,3.81562896929315,0,0,0,1.02314474045374,0.493217028184668,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0,0,11.241262801531,0.784901281975124,5.318773820805,0,0,0,0,10.1719410547442,0,0,0,0,0,0.353830258013357,0.611030144933625,1.18608451472249,0,0.104421949505455,0.0674011329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| ||
|short_description=p5@ITGA4 | |short_description=p5@ITGA4 | ||
}} | }} |
Latest revision as of 21:12, 18 September 2015
Short description: | p5@ITGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ITGA4_5end |
Coexpression cluster: | C1481_CD4_CD8_thymus_CD14CD16_CD14_granulocyte_CD19 |
Association with transcript: | -5bp_to_ENST00000478440_5end |
EntrezGene: | ITGA4 |
HGNC: | 6140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-21 | 98 |
blood island | 3.17e-21 | 98 |
connective tissue | 4.98e-20 | 371 |
hemolymphoid system | 1.48e-18 | 108 |
blood | 2.24e-12 | 15 |
haemolymphatic fluid | 2.24e-12 | 15 |
organism substance | 2.24e-12 | 15 |
immune system | 8.07e-11 | 93 |
bone element | 7.28e-09 | 82 |
bone marrow | 9.68e-09 | 76 |
hemopoietic organ | 2.73e-08 | 7 |
immune organ | 2.73e-08 | 7 |
skeletal element | 2.87e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.90e-16 | 39 |
hematologic cancer | 1.98e-15 | 51 |
immune system cancer | 1.98e-15 | 51 |
myeloid leukemia | 1.09e-12 | 31 |