FFCP PHASE1:Hg19::chr14:106328169..106328244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3507 | |EntrezGene=3507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |HGNC=5541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_X58529_5end | |association_with_transcript=-1bp_to_X58529_5end | ||
|cluster_id=chr14:106328169..106328244,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_IGHM_5end | |description=CAGE_peak_1_at_IGHM_5end | ||
|id=chr14:106328169..106328244,- | |id=chr14:106328169..106328244,- | ||
|ontology_enrichment_celltype=CL:0000945!8.40e-33!24;CL:0000826!8.40e-33!24;CL:0002087!1.70e-30!119;CL:0000738!1.84e-30!140;CL:0000542!2.37e-30!53;CL:0000051!2.37e-30!53;CL:0000838!3.73e-29!52;CL:0000037!4.22e-28!172;CL:0000566!4.22e-28!172;CL:0000988!3.89e-25!182;CL:0002031!1.70e-23!124;CL:0002032!6.13e-23!165;CL:0000837!6.13e-23!165;CL:0000236!2.82e-20!14 | |ontology_enrichment_celltype=CL:0000945!8.40e-33!24;CL:0000826!8.40e-33!24;CL:0002087!1.70e-30!119;CL:0000738!1.84e-30!140;CL:0000542!2.37e-30!53;CL:0000051!2.37e-30!53;CL:0000838!3.73e-29!52;CL:0000037!4.22e-28!172;CL:0000566!4.22e-28!172;CL:0000988!3.89e-25!182;CL:0002031!1.70e-23!124;CL:0002032!6.13e-23!165;CL:0000837!6.13e-23!165;CL:0000236!2.82e-20!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.84e-49;24!CL:0000236;3.58e-28;13!CL:0000542;1.69e-18;53!CL:0002087;1.65e-07;104!CL:0000784;3.48e-07;3!CL:0000226;9.20e-07;3!CL:0000842;9.20e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.86e-49,24;CL:0000826,2.86e-49,24;CL:0000236,4.23e-30,14;CL:0000542,7.74e-29,53;CL:0000051,7.74e-29,53;CL:0000838,2.86e-27,52;CL:0000037,1.72e-22,168;CL:0000738,2.17e-22,136;CL:0002087,8.17e-21,115;CL:0000988,1.46e-20,177;CL:0002032,1.80e-17,161;CL:0000837,1.80e-17,161;CL:0002031,6.89e-15,120;CL:0000817,2.63e-07,3;CL:0000784,3.45e-07,3;CL:0000226,9.48e-07,3;CL:0000842,9.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.69e-18;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.58e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.93e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.83e-09,10;DOID:2531,4.12e-08,51;DOID:0060083,4.12e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.36e-12!102;UBERON:0003061!7.36e-12!102;UBERON:0000178!1.00e-11!15;UBERON:0000179!1.00e-11!15;UBERON:0000463!1.00e-11!15;UBERON:0007023!1.61e-11!115;UBERON:0002193!2.66e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.05e-18;15!UBERON:0000179;9.05e-18;15!UBERON:0000463;9.05e-18;15!UBERON:0002390;6.91e-17;32!UBERON:0002193;2.80e-11;42!UBERON:0004177;3.81e-10;5!UBERON:0005057;3.81e-10;5!UBERON:0002106;3.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.43e-18,15;UBERON:0000179,9.43e-18,15;UBERON:0000463,9.43e-18,15;UBERON:0002193,7.22e-09,108;UBERON:0002390,1.06e-08,98;UBERON:0003061,1.06e-08,98;UBERON:0002106,2.98e-07,3;UBERON:0004854,2.98e-07,3;UBERON:0009034,2.98e-07,3;UBERON:0002095,2.98e-07,3;UBERON:0004782,2.98e-07,3;UBERON:0003281,2.98e-07,3;UBERON:0009664,2.98e-07,3;UBERON:0002296,2.98e-07,3;UBERON:0005602,2.98e-07,3;UBERON:0001179,2.98e-07,3;UBERON:0006293,2.98e-07,3;UBERON:0004177,5.03e-07,7;UBERON:0005057,5.03e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.5326688029307,63.0532526975583,69.5016198999788,2.75354993794233,4.98978217526377,4.02521920621798,0,0,0,51.0508851824188,30.5663849847956,24.3688364647923,0,0.200544447470142,0,0.447830948479849,2.26725566213286,0.257575567634187,0,1.13362783106643,0,0.232429036905685,0.411167888021826,0,0,1.2808035326455,0.47296445977717,0,2.5819387343353,0,0,0.818718450173537,0.449446968890169,0.306083892370903,2.24650318953266,0,0,1.39624560335142,0.852449501065388,0,0.56738522469114,0.622822248995575,0,1.5644487552606,0.434377689410233,0.605399502633369,2.20966581592539,0.949387162322653,0,0,0,0,0,0,0,0,0,406.551324705655,393.765938719997,447.423154693368,318.767476257181,388.384107424932,417.270271406955,450.832603239276,408.335006941136,363.727087260938,320.631505396533,281.735369128294,51.5468181458201,29.7069538380214,17.3833495951551,0,0,0,0.167186495390678,1.62961133316795,2.36723902867367,1.94826728407911,1.6711568532776,0.294605907474837,0.221533894583621,1.08321545506006,0.128091319725675,1.30059347559878,0,0,0,0,0,0,0.339928028092699,0.383220493601921,0,0.253019692019503,0,1.30216690771284,0.950452044448374,0.451725357233318,0.383959833463255,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.0478326039817,0,0,0,0,0.398873881556595,35.7735936458013,42.8996183085096,21.5445350771148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0527712914838,8.84428223356329,7.15074637283077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,28.4170661170015,25.2330278356984,17.0894156152249,39.7847065014508,61.2929786898429,30.4782456260577,27.0015718619057,26.9662559940052,0,0,0,111.853511425683,30.152265512077,2.27653898714925,0,1.1974762285969,5.745161103971,4.65681881992542,0,0,5.24939761776342,0,2.50634477090067,7.27954644546894,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,2.563197838382,0,0,0,0,0,0,0,0,0,0.996239941255349,28.1809593841771,0,0,120.86927896277,0,0,0,0,7.20096861149615,11.974154617347,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,2.83064206410685,2.4441205797345,0,0,0,0,0,0,35.3962291078392,0,0,0,1.20990716048664,0,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4916045935831,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,2.89176089707246,0,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,10.3301465120257,0,0,0,0,0,0,0,0,0,0.551639951094387,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,2.65013777824443,0,0.13223260174269,0,0,1.9221734262185,0.78602152549833,2.07119527673598,39.1971157231441,0.395223263795889,17.7817193636108,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,58.2086631253557,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54227114515166,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,0.177404740325278,47.0154669227579,0,0,0.0657727735628491,0,0,0.627944742804112,0,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,3.44181887056222,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,3.39566295674957,1.09279780251979,0,0,0,0,0,1.2679671827502,0,41.6348756650751,28.7482180362154,32.5808168315268,0,0,0,0,4.12856355064087,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,4.26467963801962,0.23806443146374,2.0668451147522,2.04846557176331,0,0.318235791390825,0.404234377916439,0.870866991587845,0,46.7423247921237,4.01644350198988,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,25.5617717860603,25.3249108919554 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| ||
|short_description=p1@IGHM | |short_description=p1@IGHM | ||
}} | }} |
Latest revision as of 21:08, 18 September 2015
Short description: | p1@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHM_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -1bp_to_X58529_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.86e-49 | 24 |
pro-B cell | 2.86e-49 | 24 |
B cell | 4.23e-30 | 14 |
lymphocyte | 7.74e-29 | 53 |
common lymphoid progenitor | 7.74e-29 | 53 |
lymphoid lineage restricted progenitor cell | 2.86e-27 | 52 |
hematopoietic stem cell | 1.72e-22 | 168 |
leukocyte | 2.17e-22 | 136 |
nongranular leukocyte | 8.17e-21 | 115 |
hematopoietic cell | 1.46e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 6.89e-15 | 120 |
precursor B cell | 2.63e-07 | 3 |
plasmacytoid dendritic cell | 3.45e-07 | 3 |
single nucleate cell | 9.48e-07 | 3 |
mononuclear cell | 9.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.43e-18 | 15 |
haemolymphatic fluid | 9.43e-18 | 15 |
organism substance | 9.43e-18 | 15 |
hemolymphoid system | 7.22e-09 | 108 |
hematopoietic system | 1.06e-08 | 98 |
blood island | 1.06e-08 | 98 |
spleen | 2.98e-07 | 3 |
gastrointestinal system mesentery | 2.98e-07 | 3 |
stomach region | 2.98e-07 | 3 |
mesentery | 2.98e-07 | 3 |
gastrointestinal system serosa | 2.98e-07 | 3 |
mesentery of stomach | 2.98e-07 | 3 |
gut mesentery | 2.98e-07 | 3 |
dorsal mesentery | 2.98e-07 | 3 |
dorsal mesogastrium | 2.98e-07 | 3 |
peritoneal cavity | 2.98e-07 | 3 |
spleen primordium | 2.98e-07 | 3 |
hemopoietic organ | 5.03e-07 | 7 |
immune organ | 5.03e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.83e-09 | 10 |
hematologic cancer | 4.12e-08 | 51 |
immune system cancer | 4.12e-08 | 51 |