FFCP PHASE1:Hg19::chr1:177939041..177939053,-: Difference between revisions
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|id=chr1:177939041..177939053,-
|short_description=p11@SEC16B
|description=CAGE_peak_11_at_SEC16B_5end
|association_with_transcript=0bp_to_ENST00000308284,NM_033127...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89866 | |EntrezGene=89866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30301 | |HGNC=30301 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JE7 | |UniProt=Q96JE7 | ||
|association_with_transcript=0bp_to_ENST00000308284,NM_033127,uc001gli.1_5end | |||
|cluster_id=chr1:177939041..177939053,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_11_at_SEC16B_5end | |||
|id=chr1:177939041..177939053,- | |||
|ontology_enrichment_celltype=CL:0000181!1.62e-07!12;CL:0000417!1.62e-07!12;CL:0000668!1.62e-07!12;CL:0000414!1.62e-07!12;CL:0000412!1.62e-07!12;CL:0000182!1.62e-07!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!3.35e-11!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.92e-18!27;UBERON:0005409!5.25e-14!35;UBERON:0002108!1.11e-12!14;UBERON:0004921!3.06e-07!129;UBERON:0004185!3.06e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.44e-32;4!UBERON:0000160;1.28e-20;17!UBERON:0005409;2.44e-16;22!UBERON:0004921;8.41e-11;33!UBERON:0001871;6.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.23e-32,4;UBERON:0000160,1.20e-20,17;UBERON:0005409,1.41e-14,25;UBERON:0001871,6.04e-07,6 | |||
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|short_description=p11@SEC16B | |||
}} | }} |
Latest revision as of 21:02, 18 September 2015
Short description: | p11@SEC16B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SEC16B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000308284, NM_033127, uc001gli.1_5end |
EntrezGene: | SEC16B |
HGNC: | 30301 |
UniProt: | Q96JE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.23e-32 | 4 |
intestine | 1.20e-20 | 17 |
gastrointestinal system | 1.41e-14 | 25 |
temporal lobe | 6.04e-07 | 6 |