FFCP PHASE1:Hg19::chr5:78326582..78326584,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29958 | |EntrezGene=29958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24475 | |HGNC=24475 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-151bp_to_ENST00000523201_5end | |association_with_transcript=-151bp_to_ENST00000523201_5end | ||
|cluster_id=chr5:78326582..78326584,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_DMGDH_5end | |description=CAGE_peak_7_at_DMGDH_5end | ||
|id=chr5:78326582..78326584,- | |id=chr5:78326582..78326584,- | ||
|ontology_enrichment_celltype=CL:0000181!1.05e-20!12;CL:0000417!1.05e-20!12;CL:0000668!1.05e-20!12;CL:0000414!1.05e-20!12;CL:0000412!1.05e-20!12;CL:0000182!1.05e-20!12 | |ontology_enrichment_celltype=CL:0000181!1.05e-20!12;CL:0000417!1.05e-20!12;CL:0000668!1.05e-20!12;CL:0000414!1.05e-20!12;CL:0000412!1.05e-20!12;CL:0000182!1.05e-20!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.66e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-14,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.08e-20!19;UBERON:0006925!3.08e-20!19;UBERON:0008836!3.08e-20!19;UBERON:0008835!1.71e-17!22;UBERON:0003894!1.71e-17!22;UBERON:0005172!3.67e-17!55;UBERON:0005173!3.67e-17!55;UBERON:0009854!9.78e-17!23;UBERON:0002417!2.04e-15!61;UBERON:0000916!2.04e-15!61;UBERON:0007499!2.10e-15!25;UBERON:0009497!2.10e-15!25;UBERON:0000015!2.10e-15!25;UBERON:0002423!2.10e-15!25;UBERON:0006235!2.10e-15!25;UBERON:0004161!2.10e-15!25;UBERON:0005057!8.18e-15!26;UBERON:0009856!8.18e-15!26;UBERON:0002365!1.97e-12!31;UBERON:0002330!1.97e-12!31;UBERON:0002368!5.16e-11!35;UBERON:0000949!1.46e-08!45;UBERON:0005177!1.66e-08!107;UBERON:0009569!5.13e-08!113;UBERON:0003929!3.98e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.31e-19;19!UBERON:0006925;1.31e-19;19!UBERON:0002423;3.99e-15;25!UBERON:0002365;9.49e-13;31!UBERON:0002330;9.49e-13;31!UBERON:0002368;8.69e-10;33!UBERON:0000949;1.69e-08;43!UBERON:0005172;6.31e-07;52!UBERON:0005173;6.31e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.31e-19,19;UBERON:0006925,1.31e-19,19;UBERON:0008836,1.31e-19,19;UBERON:0008835,4.60e-17,22;UBERON:0003894,4.60e-17,22;UBERON:0009854,2.31e-16,23;UBERON:0007499,3.99e-15,25;UBERON:0009497,3.99e-15,25;UBERON:0000015,3.99e-15,25;UBERON:0002423,3.99e-15,25;UBERON:0006235,3.99e-15,25;UBERON:0004161,3.99e-15,25;UBERON:0009856,1.41e-14,26;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0002368,4.78e-11,35;UBERON:0000949,9.12e-09,45;UBERON:0003929,1.99e-07,54;UBERON:0005172,1.99e-07,54;UBERON:0005173,1.99e-07,54;UBERON:0002530,7.38e-07,59;UBERON:0002417,9.34e-07,60;UBERON:0000916,9.34e-07,60 | |||
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|short_description=p7@DMGDH | |short_description=p7@DMGDH | ||
}} | }} |
Latest revision as of 20:59, 18 September 2015
Short description: | p7@DMGDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DMGDH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -151bp_to_ENST00000523201_5end |
EntrezGene: | DMGDH |
HGNC: | 24475 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.31e-19 | 19 |
digestive gland | 1.31e-19 | 19 |
liver bud | 1.31e-19 | 19 |
hepatic diverticulum | 4.60e-17 | 22 |
liver primordium | 4.60e-17 | 22 |
digestive tract diverticulum | 2.31e-16 | 23 |
epithelial sac | 3.99e-15 | 25 |
epithelium of foregut-midgut junction | 3.99e-15 | 25 |
anatomical boundary | 3.99e-15 | 25 |
hepatobiliary system | 3.99e-15 | 25 |
foregut-midgut junction | 3.99e-15 | 25 |
septum transversum | 3.99e-15 | 25 |
sac | 1.41e-14 | 26 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
endocrine gland | 4.78e-11 | 35 |
endocrine system | 9.12e-09 | 45 |
gut epithelium | 1.99e-07 | 54 |
abdomen element | 1.99e-07 | 54 |
abdominal segment element | 1.99e-07 | 54 |
gland | 7.38e-07 | 59 |
abdominal segment of trunk | 9.34e-07 | 60 |
abdomen | 9.34e-07 | 60 |