FFCP PHASE1:Hg19::chr3:50712444..50712455,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100616138 | |EntrezGene=100616138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=41653 | |HGNC=41653 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_NR_039950_5end | |association_with_transcript=-55bp_to_NR_039950_5end | ||
|cluster_id=chr3:50712444..50712455,+ | |||
|description=CAGE_peak_2_at_MIR4787_5end | |description=CAGE_peak_2_at_MIR4787_5end | ||
|id=chr3:50712444..50712455,+ | |id=chr3:50712444..50712455,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.05e-15;2 | |ontology_enrichment_development_v019=UBERON:0010122;2.05e-15;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | |ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001873;2.05e-15;2!UBERON:0005383;9.90e-11;3!UBERON:0005382;9.90e-11;3!UBERON:0001869;3.23e-09;32!UBERON:0000369;2.26e-08;4!UBERON:0002435;2.26e-08;4!UBERON:0000204;2.26e-08;4!UBERON:0001893;2.57e-08;34!UBERON:0002791;2.61e-08;32!UBERON:0001872;4.93e-07;5!UBERON:0003528;5.79e-07;34!UBERON:0002020;5.79e-07;34!UBERON:0002021;6.04e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001873;2.05e-15;2!UBERON:0005383;9.90e-11;3!UBERON:0005382;9.90e-11;3!UBERON:0001869;3.23e-09;32!UBERON:0000369;2.26e-08;4!UBERON:0002435;2.26e-08;4!UBERON:0000204;2.26e-08;4!UBERON:0001893;2.57e-08;34!UBERON:0002791;2.61e-08;32!UBERON:0001872;4.93e-07;5!UBERON:0003528;5.79e-07;34!UBERON:0002020;5.79e-07;34!UBERON:0002021;6.04e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.78e-15,2;UBERON:0010122,1.78e-15,2;UBERON:0005383,8.99e-11,3;UBERON:0005382,8.99e-11,3;UBERON:0002791,1.96e-08,32;UBERON:0001869,1.96e-08,32;UBERON:0000369,2.11e-08,4;UBERON:0002435,2.11e-08,4;UBERON:0000204,2.11e-08,4;UBERON:0010082,2.11e-08,4;UBERON:0003528,5.46e-08,34;UBERON:0002020,5.46e-08,34;UBERON:0001893,5.46e-08,34;UBERON:0001872,4.79e-07,5;UBERON:0000955,5.93e-07,68;UBERON:0006238,5.93e-07,68;UBERON:0002021,6.77e-07,5;UBERON:0002780,9.24e-07,41;UBERON:0001890,9.24e-07,41;UBERON:0003080,9.24e-07,41;UBERON:0006240,9.24e-07,41 | |||
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| ||
|short_description=p2@MIR4787 | |short_description=p2@MIR4787 | ||
}} | }} |
Latest revision as of 20:46, 18 September 2015
Short description: | p2@MIR4787 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR4787_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_NR_039950_5end |
EntrezGene: | MIR4787 |
HGNC: | 41653 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.78e-15 | 2 |
future caudate nucleus | 1.78e-15 | 2 |
caudate-putamen | 8.99e-11 | 3 |
dorsal striatum | 8.99e-11 | 3 |
regional part of telencephalon | 1.96e-08 | 32 |
cerebral hemisphere | 1.96e-08 | 32 |
corpus striatum | 2.11e-08 | 4 |
striatum | 2.11e-08 | 4 |
ventral part of telencephalon | 2.11e-08 | 4 |
future corpus striatum | 2.11e-08 | 4 |
brain grey matter | 5.46e-08 | 34 |
gray matter | 5.46e-08 | 34 |
telencephalon | 5.46e-08 | 34 |
parietal lobe | 4.79e-07 | 5 |
brain | 5.93e-07 | 68 |
future brain | 5.93e-07 | 68 |
occipital lobe | 6.77e-07 | 5 |
regional part of forebrain | 9.24e-07 | 41 |
forebrain | 9.24e-07 | 41 |
anterior neural tube | 9.24e-07 | 41 |
future forebrain | 9.24e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.26e-08 | 4 |