FFCP PHASE1:Hg19::chr12:52300721..52300741,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52300721..52300741,+ to FFCP PHASE1:Hg19::chr12:52300721..52300741,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94 | |EntrezGene=94 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=175 | |HGNC=175 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000551576_5end | |||
|cluster_id=chr12:52300721..52300741,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_ACVRL1_5end | |||
|id=chr12:52300721..52300741,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.03e-19!24;CL:0000115!2.90e-19!35;CL:0000071!2.71e-15!18;CL:0002546!2.71e-15!18;CL:0002078!1.34e-14!44;CL:0000222!1.33e-13!119;CL:0000057!6.24e-13!75;CL:0000055!9.31e-13!180;CL:1000413!1.14e-08!9;CL:0000183!1.41e-08!59;CL:0000680!1.66e-08!57;CL:0000056!1.66e-08!57;CL:0000355!1.66e-08!57;CL:0000187!3.00e-08!54;CL:0002620!8.90e-08!23;CL:0000213!2.49e-07!57;CL:0000215!2.49e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.53e-23;24!CL:0000115;9.00e-21;36!CL:0000071;5.03e-18;18!CL:0002078;1.76e-12;45!CL:1000413;4.44e-10;9!CL:0002620;7.14e-08;23!CL:0000213;8.70e-08;58!CL:0000215;8.70e-08;58!CL:0002544;3.10e-07;6!CL:0002543;7.85e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.80e-24,36;CL:0002139,6.11e-23,24;CL:0002078,9.60e-19,45;CL:0000071,5.36e-18,18;CL:0002546,5.36e-18,18;CL:0000222,6.53e-14,121;CL:0000057,8.79e-12,76;CL:0000213,2.33e-11,58;CL:0000215,2.33e-11,58;CL:1000413,4.51e-10,9;CL:0002620,7.76e-08,23;CL:0002544,3.13e-07,6;CL:0002543,8.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.03e-18;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.45e-25!84;UBERON:0000055!6.29e-25!69;UBERON:0007023!5.25e-24!115;UBERON:0002049!5.43e-23!79;UBERON:0007798!5.43e-23!79;UBERON:0004111!1.49e-22!241;UBERON:0001009!2.24e-21!113;UBERON:0000477!3.85e-21!286;UBERON:0001981!1.15e-20!60;UBERON:0007500!1.15e-20!60;UBERON:0004537!1.15e-20!60;UBERON:0006965!1.15e-20!60;UBERON:0000025!4.28e-20!194;UBERON:0004535!7.08e-20!110;UBERON:0000483!1.39e-19!309;UBERON:0000119!1.48e-19!312;UBERON:0003914!1.62e-17!118;UBERON:0000468!2.10e-15!659;UBERON:0001986!2.71e-15!18;UBERON:0004638!2.71e-15!18;UBERON:0004852!2.71e-15!18;UBERON:0000475!1.26e-14!365;UBERON:0004290!6.08e-13!70;UBERON:0000467!1.78e-12!625;UBERON:0000480!2.62e-12!626;UBERON:0000481!1.01e-11!347;UBERON:0001637!1.22e-11!42;UBERON:0003509!1.22e-11!42;UBERON:0004572!1.22e-11!42;UBERON:0000914!1.89e-11!83;UBERON:0002329!1.89e-11!83;UBERON:0003077!1.89e-11!83;UBERON:0003059!1.89e-11!83;UBERON:0007282!1.89e-11!83;UBERON:0009618!1.89e-11!83;UBERON:0007285!1.89e-11!83;UBERON:0000487!2.17e-11!22;UBERON:0000490!3.17e-11!138;UBERON:0006914!4.99e-11!25;UBERON:0002385!6.40e-11!63;UBERON:0001015!6.40e-11!63;UBERON:0000383!6.40e-11!63;UBERON:0007100!7.96e-11!27;UBERON:0001134!3.37e-10!61;UBERON:0002036!3.37e-10!61;UBERON:0003082!3.37e-10!61;UBERON:0004573!4.64e-10!33;UBERON:0004571!4.64e-10!33;UBERON:0000486!2.08e-09!82;UBERON:0000948!3.32e-09!24;UBERON:0005498!3.32e-09!24;UBERON:0004140!3.32e-09!24;UBERON:0009881!3.32e-09!24;UBERON:0004141!3.32e-09!24;UBERON:0003084!3.32e-09!24;UBERON:0007005!3.32e-09!24;UBERON:0004139!3.32e-09!24;UBERON:0004291!3.32e-09!24;UBERON:0003915!1.14e-08!9;UBERON:0004700!1.14e-08!9;UBERON:0001917!1.14e-08!9;UBERON:0005256!3.21e-08!143;UBERON:0000947!5.11e-08!21;UBERON:0010191!5.11e-08!21;UBERON:0003103!6.01e-08!69;UBERON:0002465!1.01e-07!10;UBERON:0000479!2.40e-07!787;UBERON:0002100!2.55e-07!216;UBERON:0001473!9.58e-07!8;UBERON:0004536!9.58e-07!8;UBERON:0006558!9.58e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.03e-18;18!UBERON:0001986;5.03e-18;18!UBERON:0004852;5.03e-18;18!UBERON:0000055;2.19e-13;65!UBERON:0000487;3.31e-13;22!UBERON:0006914;8.11e-13;25!UBERON:0007100;4.99e-12;25!UBERON:0007500;1.59e-11;56!UBERON:0001981;1.59e-11;56!UBERON:0004537;1.59e-11;56!UBERON:0004573;2.36e-10;33!UBERON:0004571;2.36e-10;33!UBERON:0003915;4.44e-10;9!UBERON:0004700;4.44e-10;9!UBERON:0001917;4.44e-10;9!UBERON:0000948;4.48e-10;22!UBERON:0001637;7.19e-10;42!UBERON:0003509;7.19e-10;42!UBERON:0004572;7.19e-10;42!UBERON:0002465;6.30e-09;10!UBERON:0000947;8.40e-09;21!UBERON:0010191;8.40e-09;21!UBERON:0002049;1.46e-08;75!UBERON:0007798;1.46e-08;75!UBERON:0001473;8.72e-08;8!UBERON:0004536;8.72e-08;8!UBERON:0006558;8.72e-08;8!UBERON:0004535;2.11e-07;109!UBERON:0001013;6.53e-07;14 | |||
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| ||
|short_description=p1@ACVRL1 | |||
}} | }} |
Latest revision as of 20:41, 18 September 2015
Short description: | p1@ACVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACVRL1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 29bp_to_ENST00000551576_5end |
EntrezGene: | ACVRL1 |
HGNC: | 175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.80e-24 | 36 |
endothelial cell of vascular tree | 6.11e-23 | 24 |
meso-epithelial cell | 9.60e-19 | 45 |
blood vessel endothelial cell | 5.36e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.36e-18 | 18 |
mesodermal cell | 6.53e-14 | 121 |
fibroblast | 8.79e-12 | 76 |
lining cell | 2.33e-11 | 58 |
barrier cell | 2.33e-11 | 58 |
endothelial cell of artery | 4.51e-10 | 9 |
skin fibroblast | 7.76e-08 | 23 |
aortic endothelial cell | 3.13e-07 | 6 |
vein endothelial cell | 8.03e-07 | 6 |