FFCP PHASE1:Hg19::chr4:79472888..79472970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=306 | |EntrezGene=306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=541 | |HGNC=541 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA82,D6RFJ9 | |UniProt=D6RA82,D6RFJ9 | ||
|association_with_transcript=0bp_to_ENST00000503570,ENST00000510502,ENST00000512542,ENST00000512884_5end | |association_with_transcript=0bp_to_ENST00000503570,ENST00000510502,ENST00000512542,ENST00000512884_5end | ||
|cluster_id=chr4:79472888..79472970,+ | |||
|description=CAGE_peak_1_at_ANXA3_5end | |description=CAGE_peak_1_at_ANXA3_5end | ||
|id=chr4:79472888..79472970,+ | |id=chr4:79472888..79472970,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.76e-47!254;CL:0000076!3.55e-20!62;CL:0002076!1.83e-13!43;CL:0000077!2.24e-10!19;CL:0000223!6.08e-10!59;CL:0000213!6.91e-10!57;CL:0000215!6.91e-10!57;CL:0002321!1.50e-09!248;CL:0000220!2.83e-09!246;CL:0002139!5.64e-07!24 | |ontology_enrichment_celltype=CL:0000066!2.76e-47!254;CL:0000076!3.55e-20!62;CL:0002076!1.83e-13!43;CL:0000077!2.24e-10!19;CL:0000223!6.08e-10!59;CL:0000213!6.91e-10!57;CL:0000215!6.91e-10!57;CL:0002321!1.50e-09!248;CL:0000220!2.83e-09!246;CL:0002139!5.64e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.96e-11;42!CL:0000077;1.32e-10;19!CL:0000076;9.60e-10;63!CL:0002139;4.09e-07;24!CL:0002251;8.17e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.92e-49,253;CL:0000076,7.58e-20,63;CL:0002076,1.33e-14,42;CL:0000223,1.15e-10,58;CL:0000077,1.29e-10,19;CL:0000213,3.60e-10,58;CL:0000215,3.60e-10,58;CL:0002321,4.40e-09,250;CL:0002139,4.01e-07,24;CL:0002251,8.10e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.93e-14!106;DOID:0050687!8.15e-08!143;DOID:1749!7.78e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.55e-07;14!DOID:299;8.06e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.66e-15,106;DOID:0050687,1.85e-08,143;DOID:1749,5.59e-07,14;DOID:299,7.41e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.19e-16!169;UBERON:0000925!2.19e-16!169;UBERON:0006595!2.19e-16!169;UBERON:0000477!8.26e-16!286;UBERON:0004111!6.40e-14!241;UBERON:0000483!1.08e-13!309;UBERON:0000064!1.57e-13!219;UBERON:0000119!2.61e-13!312;UBERON:0001007!2.09e-12!155;UBERON:0001555!2.09e-12!155;UBERON:0007026!2.09e-12!155;UBERON:0001048!1.53e-11!168;UBERON:0000481!1.87e-11!347;UBERON:0004921!1.53e-10!129;UBERON:0004185!1.53e-10!129;UBERON:0000467!2.59e-10!625;UBERON:0000077!3.22e-10!130;UBERON:0000468!4.30e-10!659;UBERON:0000480!4.80e-10!626;UBERON:0000025!9.00e-10!194;UBERON:0001004!1.13e-09!72;UBERON:0005911!4.40e-09!82;UBERON:0000922!9.38e-09!612;UBERON:0000466!1.27e-08!126;UBERON:0000062!1.63e-08!511;UBERON:0000464!2.14e-08!104;UBERON:0000065!2.70e-08!53;UBERON:0008947!7.19e-08!38;UBERON:0003258!7.19e-08!38;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0000923!1.20e-07!604;UBERON:0005291!1.20e-07!604;UBERON:0006598!1.20e-07!604;UBERON:0002532!1.20e-07!604;UBERON:0007023!1.89e-07!115;UBERON:0001041!2.18e-07!98;UBERON:0000063!8.48e-07!97 | |ontology_enrichment_uberon=UBERON:0004119!2.19e-16!169;UBERON:0000925!2.19e-16!169;UBERON:0006595!2.19e-16!169;UBERON:0000477!8.26e-16!286;UBERON:0004111!6.40e-14!241;UBERON:0000483!1.08e-13!309;UBERON:0000064!1.57e-13!219;UBERON:0000119!2.61e-13!312;UBERON:0001007!2.09e-12!155;UBERON:0001555!2.09e-12!155;UBERON:0007026!2.09e-12!155;UBERON:0001048!1.53e-11!168;UBERON:0000481!1.87e-11!347;UBERON:0004921!1.53e-10!129;UBERON:0004185!1.53e-10!129;UBERON:0000467!2.59e-10!625;UBERON:0000077!3.22e-10!130;UBERON:0000468!4.30e-10!659;UBERON:0000480!4.80e-10!626;UBERON:0000025!9.00e-10!194;UBERON:0001004!1.13e-09!72;UBERON:0005911!4.40e-09!82;UBERON:0000922!9.38e-09!612;UBERON:0000466!1.27e-08!126;UBERON:0000062!1.63e-08!511;UBERON:0000464!2.14e-08!104;UBERON:0000065!2.70e-08!53;UBERON:0008947!7.19e-08!38;UBERON:0003258!7.19e-08!38;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0000923!1.20e-07!604;UBERON:0005291!1.20e-07!604;UBERON:0006598!1.20e-07!604;UBERON:0002532!1.20e-07!604;UBERON:0007023!1.89e-07!115;UBERON:0001041!2.18e-07!98;UBERON:0000063!8.48e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0000490;2.55e-07;33!UBERON:0000065;8.85e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.19e-17,160;UBERON:0000925,9.19e-17,160;UBERON:0006595,9.19e-17,160;UBERON:0004111,1.16e-13,240;UBERON:0001007,4.91e-13,145;UBERON:0001555,4.91e-13,145;UBERON:0007026,4.91e-13,145;UBERON:0000483,2.74e-12,306;UBERON:0001048,3.07e-12,160;UBERON:0000119,7.21e-12,309;UBERON:0004921,1.25e-11,118;UBERON:0000025,1.07e-09,192;UBERON:0005911,3.35e-09,82;UBERON:0001004,3.35e-09,74;UBERON:0000922,4.16e-09,592;UBERON:0001041,1.41e-08,87;UBERON:0000065,3.40e-08,54;UBERON:0008947,3.90e-08,38;UBERON:0003258,3.90e-08,38;UBERON:0005423,7.58e-08,581;UBERON:0007023,1.40e-07,114;UBERON:0011216,3.62e-07,223;UBERON:0002050,8.23e-07,564 | |||
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| ||
|short_description=p1@ANXA3 | |short_description=p1@ANXA3 | ||
}} | }} |
Latest revision as of 20:30, 18 September 2015
Short description: | p1@ANXA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ANXA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503570, ENST00000510502, ENST00000512542, ENST00000512884_5end |
EntrezGene: | ANXA3 |
HGNC: | 541 |
UniProt: | D6RA82D6RFJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.92e-49 | 253 |
squamous epithelial cell | 7.58e-20 | 63 |
endo-epithelial cell | 1.33e-14 | 42 |
endodermal cell | 1.15e-10 | 58 |
mesothelial cell | 1.29e-10 | 19 |
lining cell | 3.60e-10 | 58 |
barrier cell | 3.60e-10 | 58 |
embryonic cell | 4.40e-09 | 250 |
endothelial cell of vascular tree | 4.01e-07 | 24 |
epithelial cell of alimentary canal | 8.10e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.19e-17 | 160 |
endoderm | 9.19e-17 | 160 |
presumptive endoderm | 9.19e-17 | 160 |
anatomical conduit | 1.16e-13 | 240 |
digestive system | 4.91e-13 | 145 |
digestive tract | 4.91e-13 | 145 |
primitive gut | 4.91e-13 | 145 |
epithelium | 2.74e-12 | 306 |
primordium | 3.07e-12 | 160 |
cell layer | 7.21e-12 | 309 |
subdivision of digestive tract | 1.25e-11 | 118 |
tube | 1.07e-09 | 192 |
endo-epithelium | 3.35e-09 | 82 |
respiratory system | 3.35e-09 | 74 |
embryo | 4.16e-09 | 592 |
foregut | 1.41e-08 | 87 |
respiratory tract | 3.40e-08 | 54 |
respiratory primordium | 3.90e-08 | 38 |
endoderm of foregut | 3.90e-08 | 38 |
developing anatomical structure | 7.58e-08 | 581 |
adult organism | 1.40e-07 | 114 |
organ system subdivision | 3.62e-07 | 223 |
embryonic structure | 8.23e-07 | 564 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.66e-15 | 106 |
cell type cancer | 1.85e-08 | 143 |
squamous cell carcinoma | 5.59e-07 | 14 |
adenocarcinoma | 7.41e-07 | 25 |