FFCP PHASE1:Hg19::chr21:46424480..46424506,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=378825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=19725 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=135bp_to_ENST00000422199,NR_024089,uc002zgo.2_5end | |||
|cluster_id=chr21:46424480..46424506,- | |||
|coexpression_cluster_id=C2636 | |||
|description=CAGE_peak_1_at_LINC00162_5end | |||
|id=chr21:46424480..46424506,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.96e-10;3!CL:0000077;2.94e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.83e-10,3;CL:0000066,1.07e-08,253;CL:0000077,3.01e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.84e-12;29 | |||
|ontology_enrichment_disease=DOID:2394!2.54e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.28e-12,235;DOID:305,1.66e-12,106;DOID:14566,3.77e-12,239;DOID:0050687,1.94e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.51e-18!9;UBERON:0001557!1.71e-10!19;UBERON:0003076!5.32e-09!15;UBERON:0003057!5.32e-09!15;UBERON:0001049!7.62e-09!57;UBERON:0005068!7.62e-09!57;UBERON:0006241!7.62e-09!57;UBERON:0007135!7.62e-09!57;UBERON:0002298!7.80e-09!8;UBERON:0004732!9.37e-09!13;UBERON:0004733!2.10e-07!12;UBERON:0002028!2.10e-07!12;UBERON:0007277!2.10e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.18e-30;9!UBERON:0001557;3.18e-30;9!UBERON:0003124;8.96e-10;3!UBERON:0000920;8.96e-10;3!UBERON:0000072;2.27e-08;37!UBERON:0001264;2.11e-07;10!UBERON:0002075;2.53e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.29e-30,9;UBERON:0001557,2.66e-16,19;UBERON:0000920,8.83e-10,3;UBERON:0008947,2.16e-08,38;UBERON:0003258,2.16e-08,38;UBERON:0000072,1.31e-07,47;UBERON:0001264,1.86e-07,10;UBERON:0002075,2.25e-07,18;UBERON:0003124,4.92e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,1.22400414746552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,1.73815822752988,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0.860234595106124,3.81854551768354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816616685019573,0,0.826606249406124,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,15.9714180053789,14.6668680367948,15.1836948826594,17.9779175553802,17.8661144155773,15.1853196231102,16.0449256710596,16.2863816054037,14.6203919639628,0,0,2.4694440679884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31408636109622,14.8223308642121,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12446941001296,1.74306691720059,0,0,0,0,0,0,0,0.289562613335158,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88096518354476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,11.6564155965319,0,0,0,0,0,0,1.5950057986596,5.22106282390615,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,0,0,0,8.98287404276143,0,0,0,0.063186579628488,0,0,1.99396161812156,2.64793564700399,3.13932918407225,3.58417289318877,0,0,0,1.56787835863004,0,0,0,8.80482614730675,6.43185990358433,7.06192930657599,0,0,0,9.04476702668556,0,0,1.56441106187842,0.240476460754601,0,8.5918132120316,0,0,0,0,10.1887079163655,0,0,0,0,5.20111061822734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26720403823288,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.906496732161005,0,0,2.06852730178481,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.776503360757966,0.993542447062135,0,0,0,0,5.41111385305795,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,2.48420731002015,0,1.86089200190596,0,12.3211239377719,3.80805212168795,0.813741466409323,0,5.47793840916691,0,0.398095888698616,1.20008329398946,0,0,0,0,0,7.56883446699114,7.02788369088044,0,8.3210479532199,0,0,6.35923743778251,8.12770071351053,0,0,0,0,0,0,0,0,0,3.93131818615695,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.207471757392654,0,7.13847101295772,0,0,0,6.70048863671962,0.381382095467167,0,0,0,8.26990781684432,0,0,0,2.66140955190681,0.0675375846183947,0,0,0.570742291745161,0,0,0,0,0,0.535701835878287,0,0,0,0.443511850813194,0,0,0.40781839786099,0,0,0,0,0.157115589916002,0.840816489941367,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17021971490014,0,0,0,0,0,1.96308467114945,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0.203977659483963,0,0,0,1.06090177505535,1.87574891109325,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,6.91927783193283,6.29691340678521,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LINC00162 | |||
}} |
Latest revision as of 20:21, 18 September 2015
Short description: | p1@LINC00162 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00162_5end |
Coexpression cluster: | C2636_Hep2_Mammary_cervical_mesenchymal_mesothelioma_giant_pagetoid |
Association with transcript: | 135bp_to_ENST00000422199, NR_024089, uc002zgo.2_5end |
EntrezGene: | LINC00162 |
HGNC: | 19725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.83e-10 | 3 |
epithelial cell | 1.07e-08 | 253 |
mesothelial cell | 3.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.29e-30 | 9 |
upper respiratory tract | 2.66e-16 | 19 |
egg chorion | 8.83e-10 | 3 |
respiratory primordium | 2.16e-08 | 38 |
endoderm of foregut | 2.16e-08 | 38 |
segment of respiratory tract | 1.31e-07 | 47 |
pancreas | 1.86e-07 | 10 |
viscus | 2.25e-07 | 18 |
chorion | 4.92e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.28e-12 | 235 |
carcinoma | 1.66e-12 | 106 |
disease of cellular proliferation | 3.77e-12 | 239 |
cell type cancer | 1.94e-11 | 143 |