FFCP PHASE1:Hg19::chr12:51785088..51785093,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4128 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NCL4 | |||
|association_with_transcript=106bp_to_ENST00000356317,NM_007210,uc001ryl.1_5end | |||
|cluster_id=chr12:51785088..51785093,- | |||
|description=CAGE_peak_12_at_GALNT6_5end | |||
|id=chr12:51785088..51785093,- | |||
|ontology_enrichment_celltype=CL:0000349!3.57e-15!3;CL:0002577!3.57e-15!3;CL:0000840!2.00e-07!5;CL:0001029!2.00e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002577;9.74e-88;3!CL:0000349;5.27e-15;19!CL:0000097;1.60e-14;5!CL:0000163;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.52e-87,3;CL:0000349,5.66e-15,19;CL:0000097,1.40e-14,5;CL:0002028,1.40e-14,5;CL:0000163,1.04e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001987!1.71e-11!4;UBERON:0004340!1.71e-11!4;UBERON:0003124!6.52e-11!7;UBERON:0005631!3.45e-08!14;UBERON:0000158!3.45e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.35e-66;4!UBERON:0000478;3.97e-12;24!UBERON:0000077;6.56e-11;27!UBERON:0000474;5.60e-08;37!UBERON:0003100;4.46e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,4.67e-66,4;UBERON:0004340,4.67e-66,4;UBERON:0003124,2.18e-38,7;UBERON:0005631,7.13e-20,14;UBERON:0000158,7.13e-20,14;UBERON:0000995,1.16e-13,21;UBERON:0005795,4.26e-13,22;UBERON:0003975,4.26e-13,22;UBERON:0000478,4.20e-12,24;UBERON:0004175,1.15e-11,25;UBERON:0000077,3.24e-10,29;UBERON:0003134,3.03e-08,37;UBERON:0000474,3.03e-08,37;UBERON:0003100,1.52e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.449446968890169,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,1.67292024625129,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@GALNT6 | |||
}} |
Latest revision as of 20:16, 18 September 2015
Short description: | p12@GALNT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GALNT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 106bp_to_ENST00000356317, NM_007210, uc001ryl.1_5end |
EntrezGene: | GALNT6 |
HGNC: | 4128 |
UniProt: | Q8NCL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.52e-87 | 3 |
extraembryonic cell | 5.66e-15 | 19 |
mast cell | 1.40e-14 | 5 |
basophil mast progenitor cell | 1.40e-14 | 5 |
endocrine cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
placenta | 4.67e-66 | 4 |
allantois | 4.67e-66 | 4 |
chorion | 2.18e-38 | 7 |
extraembryonic membrane | 7.13e-20 | 14 |
membranous layer | 7.13e-20 | 14 |
uterus | 1.16e-13 | 21 |
embryonic uterus | 4.26e-13 | 22 |
internal female genitalia | 4.26e-13 | 22 |
extraembryonic structure | 4.20e-12 | 24 |
internal genitalia | 1.15e-11 | 25 |
mixed endoderm/mesoderm-derived structure | 3.24e-10 | 29 |
female reproductive organ | 3.03e-08 | 37 |
female reproductive system | 3.03e-08 | 37 |
female organism | 1.52e-07 | 41 |