FFCP PHASE2:Hg19::chr1:62902414..62902438,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7398 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:12607 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=12607 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O94782 | ||
|association_with_transcript=31bp_to_NM_003368,uc001dal.1_5end | |association_with_transcript=31bp_to_NM_003368,uc001dal.1_5end | ||
|cluster_id=chr1:62902414..62902438,+ | |cluster_id=chr1:62902414..62902438,+ |
Latest revision as of 20:03, 18 September 2015
Short description: | p5@USP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_USP1_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 31bp_to_NM_003368, uc001dal.1_5end |
EntrezGene: | USP1 |
HGNC: | 12607 |
UniProt: | O94782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@USP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hematopoietic oligopotent progenitor cell | 4.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.75e-07 | 161 |
mast cell | 6.84e-07 | 5 |
basophil mast progenitor cell | 6.84e-07 | 5 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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larynx | 2.56e-10 | 9 |
upper respiratory tract | 3.02e-07 | 19 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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cancer | 5.52e-28 | 235 |
disease of cellular proliferation | 8.86e-27 | 239 |
leukemia | 7.69e-18 | 39 |
hematologic cancer | 1.47e-17 | 51 |
immune system cancer | 1.47e-17 | 51 |
cell type cancer | 7.05e-17 | 143 |
carcinoma | 1.52e-14 | 106 |
organ system cancer | 5.35e-14 | 137 |
myeloid leukemia | 5.76e-14 | 31 |
Showing 1 to 9 of 9 entries