FFCP PHASE1:Hg19::chr5:77656394..77656413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10563 | |HGNC=10563 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000339292_5end | |association_with_transcript=0bp_to_ENST00000339292_5end | ||
|cluster_id=chr5:77656394..77656413,+ | |||
|coexpression_cluster_id=C2829 | |coexpression_cluster_id=C2829 | ||
|description=CAGE_peak_3_at_SCAMP1_5end | |description=CAGE_peak_3_at_SCAMP1_5end | ||
|id=chr5:77656394..77656413,+ | |id=chr5:77656394..77656413,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.03e-09;82 | |||
|ontology_enrichment_disease=DOID:14566!4.91e-08!239;DOID:162!8.22e-08!235;DOID:0050687!1.00e-07!143 | |ontology_enrichment_disease=DOID:14566!4.91e-08!239;DOID:162!8.22e-08!235;DOID:0050687!1.00e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.29e-08,239;DOID:162,8.86e-08,235;DOID:0050687,1.04e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.67e-24!94;UBERON:0001016!9.67e-24!94;UBERON:0001049!1.11e-22!57;UBERON:0005068!1.11e-22!57;UBERON:0006241!1.11e-22!57;UBERON:0007135!1.11e-22!57;UBERON:0001017!2.20e-22!82;UBERON:0005743!1.95e-21!86;UBERON:0007023!5.17e-21!115;UBERON:0000955!2.78e-20!69;UBERON:0006238!2.78e-20!69;UBERON:0003080!8.52e-20!42;UBERON:0002780!3.72e-19!41;UBERON:0001890!3.72e-19!41;UBERON:0006240!3.72e-19!41;UBERON:0002616!1.78e-18!59;UBERON:0002020!1.31e-15!34;UBERON:0003528!1.31e-15!34;UBERON:0001893!4.34e-15!34;UBERON:0001869!1.05e-14!32;UBERON:0002791!1.59e-14!33;UBERON:0002619!1.03e-13!22;UBERON:0000033!5.97e-13!123;UBERON:0003075!1.15e-12!86;UBERON:0007284!1.15e-12!86;UBERON:0001950!1.31e-12!20;UBERON:0004121!2.50e-12!169;UBERON:0000153!2.84e-12!129;UBERON:0007811!2.84e-12!129;UBERON:0002346!3.37e-12!90;UBERON:0000924!4.07e-12!173;UBERON:0006601!4.07e-12!173;UBERON:0003056!2.04e-11!61;UBERON:0000956!2.59e-11!25;UBERON:0000203!2.59e-11!25;UBERON:0000922!7.46e-10!612;UBERON:0000062!1.07e-08!511;UBERON:0002050!1.19e-08!605;UBERON:0005423!1.19e-08!605;UBERON:0000468!1.25e-08!659;UBERON:0000923!2.29e-08!604;UBERON:0005291!2.29e-08!604;UBERON:0006598!2.29e-08!604;UBERON:0002532!2.29e-08!604;UBERON:0000480!6.79e-08!626;UBERON:0000467!1.13e-07!625;UBERON:0004111!2.88e-07!241 | |ontology_enrichment_uberon=UBERON:0000073!9.67e-24!94;UBERON:0001016!9.67e-24!94;UBERON:0001049!1.11e-22!57;UBERON:0005068!1.11e-22!57;UBERON:0006241!1.11e-22!57;UBERON:0007135!1.11e-22!57;UBERON:0001017!2.20e-22!82;UBERON:0005743!1.95e-21!86;UBERON:0007023!5.17e-21!115;UBERON:0000955!2.78e-20!69;UBERON:0006238!2.78e-20!69;UBERON:0003080!8.52e-20!42;UBERON:0002780!3.72e-19!41;UBERON:0001890!3.72e-19!41;UBERON:0006240!3.72e-19!41;UBERON:0002616!1.78e-18!59;UBERON:0002020!1.31e-15!34;UBERON:0003528!1.31e-15!34;UBERON:0001893!4.34e-15!34;UBERON:0001869!1.05e-14!32;UBERON:0002791!1.59e-14!33;UBERON:0002619!1.03e-13!22;UBERON:0000033!5.97e-13!123;UBERON:0003075!1.15e-12!86;UBERON:0007284!1.15e-12!86;UBERON:0001950!1.31e-12!20;UBERON:0004121!2.50e-12!169;UBERON:0000153!2.84e-12!129;UBERON:0007811!2.84e-12!129;UBERON:0002346!3.37e-12!90;UBERON:0000924!4.07e-12!173;UBERON:0006601!4.07e-12!173;UBERON:0003056!2.04e-11!61;UBERON:0000956!2.59e-11!25;UBERON:0000203!2.59e-11!25;UBERON:0000922!7.46e-10!612;UBERON:0000062!1.07e-08!511;UBERON:0002050!1.19e-08!605;UBERON:0005423!1.19e-08!605;UBERON:0000468!1.25e-08!659;UBERON:0000923!2.29e-08!604;UBERON:0005291!2.29e-08!604;UBERON:0006598!2.29e-08!604;UBERON:0002532!2.29e-08!604;UBERON:0000480!6.79e-08!626;UBERON:0000467!1.13e-07!625;UBERON:0004111!2.88e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.83e-14;41!UBERON:0001890;1.83e-14;41!UBERON:0002619;4.93e-14;22!UBERON:0003528;6.70e-14;34!UBERON:0002020;6.70e-14;34!UBERON:0001869;1.07e-13;32!UBERON:0002791;1.50e-13;32!UBERON:0001893;2.48e-13;34!UBERON:0001950;6.87e-13;20!UBERON:0000073;2.52e-12;53!UBERON:0002616;2.52e-12;53!UBERON:0000956;1.12e-11;25!UBERON:0000203;1.12e-11;25!UBERON:0000955;1.52e-10;68!UBERON:0001016;4.45e-10;83!UBERON:0001017;6.94e-10;75!UBERON:0007023;5.58e-07;114 | |||
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| ||
|short_description=p3@SCAMP1 | |short_description=p3@SCAMP1 | ||
}} | }} |
Latest revision as of 20:03, 18 September 2015
Short description: | p3@SCAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCAMP1_5end |
Coexpression cluster: | C2829_pineal_cerebellum_occipital_thalamus_medial_globus_parietal |
Association with transcript: | 0bp_to_ENST00000339292_5end |
EntrezGene: | NA |
HGNC: | 10563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.29e-08 | 239 |
cancer | 8.86e-08 | 235 |
cell type cancer | 1.04e-07 | 143 |