FFCP PHASE1:Hg19::chr21:46313414..46313448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3689 | |EntrezGene=3689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6155 | |HGNC=6155 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=493bp_to_ENST00000475170_5end | |association_with_transcript=493bp_to_ENST00000475170_5end | ||
|cluster_id=chr21:46313414..46313448,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_8_at_ITGB2_5end | |description=CAGE_peak_8_at_ITGB2_5end | ||
|id=chr21:46313414..46313448,- | |id=chr21:46313414..46313448,- | ||
|ontology_enrichment_celltype=CL:0000738!1.12e-70!140;CL:0002087!9.12e-68!119;CL:0000037!7.21e-66!172;CL:0000566!7.21e-66!172;CL:0002032!4.16e-65!165;CL:0000837!4.16e-65!165;CL:0002031!2.48e-64!124;CL:0000988!3.33e-60!182;CL:0000766!1.15e-55!76;CL:0002009!8.42e-55!65;CL:0002194!4.44e-53!63;CL:0000576!4.44e-53!63;CL:0000040!4.44e-53!63;CL:0000559!4.44e-53!63;CL:0000557!1.47e-51!71;CL:0000839!7.99e-49!70;CL:0000763!1.58e-48!112;CL:0000049!1.58e-48!112;CL:0002057!1.84e-46!42;CL:0000860!2.95e-42!45;CL:0000134!3.37e-15!358;CL:0000838!1.62e-14!52;CL:0002320!2.66e-14!365;CL:0000542!4.69e-14!53;CL:0000051!4.69e-14!53;CL:0000219!1.09e-11!390;CL:0000084!2.80e-11!25;CL:0000827!2.80e-11!25;CL:0000791!9.25e-11!18;CL:0000789!9.25e-11!18;CL:0002420!9.25e-11!18;CL:0002419!9.25e-11!18;CL:0000790!9.25e-11!18;CL:0002393!3.14e-09!9;CL:0002397!3.14e-09!9;CL:0000048!3.86e-09!430;CL:0000723!5.45e-09!436;CL:0000625!1.37e-08!11;CL:0000034!2.62e-08!444 | |ontology_enrichment_celltype=CL:0000738!1.12e-70!140;CL:0002087!9.12e-68!119;CL:0000037!7.21e-66!172;CL:0000566!7.21e-66!172;CL:0002032!4.16e-65!165;CL:0000837!4.16e-65!165;CL:0002031!2.48e-64!124;CL:0000988!3.33e-60!182;CL:0000766!1.15e-55!76;CL:0002009!8.42e-55!65;CL:0002194!4.44e-53!63;CL:0000576!4.44e-53!63;CL:0000040!4.44e-53!63;CL:0000559!4.44e-53!63;CL:0000557!1.47e-51!71;CL:0000839!7.99e-49!70;CL:0000763!1.58e-48!112;CL:0000049!1.58e-48!112;CL:0002057!1.84e-46!42;CL:0000860!2.95e-42!45;CL:0000134!3.37e-15!358;CL:0000838!1.62e-14!52;CL:0002320!2.66e-14!365;CL:0000542!4.69e-14!53;CL:0000051!4.69e-14!53;CL:0000219!1.09e-11!390;CL:0000084!2.80e-11!25;CL:0000827!2.80e-11!25;CL:0000791!9.25e-11!18;CL:0000789!9.25e-11!18;CL:0002420!9.25e-11!18;CL:0002419!9.25e-11!18;CL:0000790!9.25e-11!18;CL:0002393!3.14e-09!9;CL:0002397!3.14e-09!9;CL:0000048!3.86e-09!430;CL:0000723!5.45e-09!436;CL:0000625!1.37e-08!11;CL:0000034!2.62e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-68;33!CL:0002057;2.52e-68;33!CL:0000473;6.02e-65;39!CL:0000234;6.02e-65;39!CL:0000576;3.71e-61;48!CL:0000766;1.57e-46;69!CL:0000763;1.09e-24;100!CL:0002087;9.31e-17;104!CL:0000738;4.53e-16;136!CL:0002393;3.59e-12;6!CL:0002397;3.59e-12;6!CL:0000235;4.71e-12;6!CL:0000775;3.33e-10;3!CL:0000094;4.47e-09;8!CL:0000988;4.90e-09;177!CL:0002619;5.29e-09;3!CL:0000875;8.28e-09;3!CL:0002396;8.28e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.89e-106,48;CL:0000234,1.89e-106,48;CL:0002194,5.34e-100,59;CL:0000576,5.34e-100,59;CL:0000040,5.34e-100,59;CL:0000559,5.34e-100,59;CL:0000766,9.01e-100,72;CL:0002009,2.26e-96,61;CL:0000860,4.72e-95,42;CL:0002057,4.72e-95,42;CL:0000839,2.99e-88,66;CL:0000557,9.05e-87,67;CL:0000763,9.03e-68,108;CL:0000049,9.03e-68,108;CL:0000738,4.25e-60,136;CL:0002087,1.18e-59,115;CL:0002031,8.52e-52,120;CL:0000037,7.08e-50,168;CL:0002032,1.72e-48,161;CL:0000837,1.72e-48,161;CL:0000988,1.22e-46,177;CL:0002393,2.20e-19,9;CL:0002397,2.20e-19,9;CL:0000134,2.47e-16,354;CL:0002320,9.57e-16,361;CL:0000219,1.12e-13,386;CL:0000235,2.81e-12,6;CL:0000048,3.73e-11,427;CL:0000723,8.29e-11,433;CL:0000034,2.32e-10,441;CL:0000775,2.70e-10,3;CL:0000094,4.18e-09,8;CL:0002619,4.94e-09,3;CL:0000875,6.36e-09,3;CL:0002396,6.36e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.87e-67;42!CL:0000049;1.68e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.96e-54!102;UBERON:0003061!8.96e-54!102;UBERON:0002193!8.69e-48!112;UBERON:0002371!2.71e-43!80;UBERON:0001474!9.21e-39!86;UBERON:0004765!2.83e-33!101;UBERON:0001434!2.83e-33!101;UBERON:0002405!1.29e-32!115;UBERON:0003081!8.36e-16!216;UBERON:0002204!3.73e-15!167;UBERON:0002384!1.26e-13!375;UBERON:0000178!2.78e-08!15;UBERON:0000179!2.78e-08!15;UBERON:0000463!2.78e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.66e-08;15!UBERON:0000179;3.66e-08;15!UBERON:0000463;3.66e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.59e-75,98;UBERON:0003061,1.59e-75,98;UBERON:0002371,3.57e-75,76;UBERON:0001474,7.70e-69,82;UBERON:0002193,2.32e-67,108;UBERON:0004765,1.07e-61,90;UBERON:0002405,2.49e-59,93;UBERON:0001434,2.33e-54,100;UBERON:0003081,9.63e-30,203;UBERON:0002204,8.87e-28,167;UBERON:0002384,6.06e-15,371;UBERON:0000926,1.61e-14,315;UBERON:0004120,1.61e-14,315;UBERON:0006603,1.61e-14,315;UBERON:0000178,3.78e-08,15;UBERON:0000179,3.78e-08,15;UBERON:0000463,3.78e-08,15 | |||
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|short_description=p8@ITGB2 | |short_description=p8@ITGB2 | ||
}} | }} |
Latest revision as of 19:46, 18 September 2015
Short description: | p8@ITGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ITGB2_5end |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | 493bp_to_ENST00000475170_5end |
EntrezGene: | ITGB2 |
HGNC: | 6155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.59e-75 | 98 |
blood island | 1.59e-75 | 98 |
bone marrow | 3.57e-75 | 76 |
bone element | 7.70e-69 | 82 |
hemolymphoid system | 2.32e-67 | 108 |
skeletal element | 1.07e-61 | 90 |
immune system | 2.49e-59 | 93 |
skeletal system | 2.33e-54 | 100 |
lateral plate mesoderm | 9.63e-30 | 203 |
musculoskeletal system | 8.87e-28 | 167 |
connective tissue | 6.06e-15 | 371 |
mesoderm | 1.61e-14 | 315 |
mesoderm-derived structure | 1.61e-14 | 315 |
presumptive mesoderm | 1.61e-14 | 315 |
blood | 3.78e-08 | 15 |
haemolymphatic fluid | 3.78e-08 | 15 |
organism substance | 3.78e-08 | 15 |