FFCP PHASE1:Hg19::chr17:16284073..16284098,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7314 | |EntrezGene=7314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12463 | |HGNC=12463 | ||
|TSSclassifier=strong | |||
|UniProt=P0CG47 | |UniProt=P0CG47 | ||
|association_with_transcript=-14bp_to_ENST00000302182_5end | |association_with_transcript=-14bp_to_ENST00000302182_5end | ||
|cluster_id=chr17:16284073..16284098,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_UBB_5end | |description=CAGE_peak_4_at_UBB_5end | ||
|id=chr17:16284073..16284098,+ | |id=chr17:16284073..16284098,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.12e-07;5!CL:0000540;4.95e-07;6!CL:0000404;4.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.59e-08,5;CL:0000540,3.78e-07,6;CL:0000031,3.78e-07,6;CL:0000404,3.78e-07,6;CL:0000047,7.52e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;4.95e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.62e-14!82;UBERON:0005743!2.56e-14!86;UBERON:0000073!4.13e-13!94;UBERON:0001016!4.13e-13!94;UBERON:0001049!3.30e-12!57;UBERON:0005068!3.30e-12!57;UBERON:0006241!3.30e-12!57;UBERON:0007135!3.30e-12!57;UBERON:0000955!9.60e-12!69;UBERON:0006238!9.60e-12!69;UBERON:0003075!1.16e-10!86;UBERON:0007284!1.16e-10!86;UBERON:0002616!2.81e-10!59;UBERON:0002346!3.35e-10!90;UBERON:0003080!5.27e-10!42;UBERON:0002780!7.70e-10!41;UBERON:0001890!7.70e-10!41;UBERON:0006240!7.70e-10!41;UBERON:0001869!1.15e-09!32;UBERON:0000956!2.65e-09!25;UBERON:0000203!2.65e-09!25;UBERON:0002020!2.88e-09!34;UBERON:0003528!2.88e-09!34;UBERON:0002791!3.45e-09!33;UBERON:0001893!3.54e-09!34;UBERON:0002619!1.81e-08!22;UBERON:0003056!2.46e-08!61;UBERON:0001950!5.29e-08!20;UBERON:0004121!8.79e-08!169;UBERON:0000924!1.32e-07!173;UBERON:0006601!1.32e-07!173;UBERON:0001737!9.80e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!1.62e-14!82;UBERON:0005743!2.56e-14!86;UBERON:0000073!4.13e-13!94;UBERON:0001016!4.13e-13!94;UBERON:0001049!3.30e-12!57;UBERON:0005068!3.30e-12!57;UBERON:0006241!3.30e-12!57;UBERON:0007135!3.30e-12!57;UBERON:0000955!9.60e-12!69;UBERON:0006238!9.60e-12!69;UBERON:0003075!1.16e-10!86;UBERON:0007284!1.16e-10!86;UBERON:0002616!2.81e-10!59;UBERON:0002346!3.35e-10!90;UBERON:0003080!5.27e-10!42;UBERON:0002780!7.70e-10!41;UBERON:0001890!7.70e-10!41;UBERON:0006240!7.70e-10!41;UBERON:0001869!1.15e-09!32;UBERON:0000956!2.65e-09!25;UBERON:0000203!2.65e-09!25;UBERON:0002020!2.88e-09!34;UBERON:0003528!2.88e-09!34;UBERON:0002791!3.45e-09!33;UBERON:0001893!3.54e-09!34;UBERON:0002619!1.81e-08!22;UBERON:0003056!2.46e-08!61;UBERON:0001950!5.29e-08!20;UBERON:0004121!8.79e-08!169;UBERON:0000924!1.32e-07!173;UBERON:0006601!1.32e-07!173;UBERON:0001737!9.80e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.38e-13;9!UBERON:0001557;2.38e-13;9!UBERON:0002791;4.45e-10;32!UBERON:0000956;7.37e-10;25!UBERON:0000203;7.37e-10;25!UBERON:0002619;7.40e-10;22!UBERON:0001869;8.30e-10;32!UBERON:0001950;1.57e-09;20!UBERON:0003528;2.05e-09;34!UBERON:0002020;2.05e-09;34!UBERON:0001893;1.28e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.10e-14,9;UBERON:0001017,5.78e-13,81;UBERON:0001016,1.08e-11,89;UBERON:0002791,1.04e-10,32;UBERON:0001869,1.04e-10,32;UBERON:0002619,5.41e-10,22;UBERON:0000956,5.91e-10,25;UBERON:0000203,5.91e-10,25;UBERON:0003528,8.20e-10,34;UBERON:0002020,8.20e-10,34;UBERON:0001893,8.20e-10,34;UBERON:0002780,1.40e-09,41;UBERON:0001890,1.40e-09,41;UBERON:0003080,1.40e-09,41;UBERON:0006240,1.40e-09,41;UBERON:0001950,1.51e-09,20;UBERON:0001049,4.07e-09,56;UBERON:0005068,4.07e-09,56;UBERON:0006241,4.07e-09,56;UBERON:0007135,4.07e-09,56;UBERON:0000073,6.55e-09,53;UBERON:0002616,6.55e-09,53;UBERON:0000955,1.32e-08,68;UBERON:0006238,1.32e-08,68;UBERON:0003056,3.11e-07,61;UBERON:0011216,4.88e-07,223;UBERON:0003075,5.46e-07,82;UBERON:0007284,5.46e-07,82;UBERON:0002346,5.62e-07,86 | |||
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| ||
|short_description=p4@UBB | |short_description=p4@UBB | ||
}} | }} |
Latest revision as of 19:40, 18 September 2015
Short description: | p4@UBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UBB_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -14bp_to_ENST00000302182_5end |
EntrezGene: | UBB |
HGNC: | 12463 |
UniProt: | P0CG47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.59e-08 | 5 |
neuron | 3.78e-07 | 6 |
neuroblast | 3.78e-07 | 6 |
electrically signaling cell | 3.78e-07 | 6 |
neuronal stem cell | 7.52e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.10e-14 | 9 |
central nervous system | 5.78e-13 | 81 |
nervous system | 1.08e-11 | 89 |
regional part of telencephalon | 1.04e-10 | 32 |
cerebral hemisphere | 1.04e-10 | 32 |
regional part of cerebral cortex | 5.41e-10 | 22 |
cerebral cortex | 5.91e-10 | 25 |
pallium | 5.91e-10 | 25 |
brain grey matter | 8.20e-10 | 34 |
gray matter | 8.20e-10 | 34 |
telencephalon | 8.20e-10 | 34 |
regional part of forebrain | 1.40e-09 | 41 |
forebrain | 1.40e-09 | 41 |
anterior neural tube | 1.40e-09 | 41 |
future forebrain | 1.40e-09 | 41 |
neocortex | 1.51e-09 | 20 |
neural tube | 4.07e-09 | 56 |
neural rod | 4.07e-09 | 56 |
future spinal cord | 4.07e-09 | 56 |
neural keel | 4.07e-09 | 56 |
regional part of nervous system | 6.55e-09 | 53 |
regional part of brain | 6.55e-09 | 53 |
brain | 1.32e-08 | 68 |
future brain | 1.32e-08 | 68 |
pre-chordal neural plate | 3.11e-07 | 61 |
organ system subdivision | 4.88e-07 | 223 |
neural plate | 5.46e-07 | 82 |
presumptive neural plate | 5.46e-07 | 82 |
neurectoderm | 5.62e-07 | 86 |