FFCP PHASE1:Hg19::chr1:62672658..62672669,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54596 | |EntrezGene=54596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25595 | |HGNC=25595 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T7N2 | |UniProt=Q5T7N2 | ||
|association_with_transcript=50bp_to_AK001746_5end | |association_with_transcript=50bp_to_AK001746_5end | ||
|cluster_id=chr1:62672658..62672669,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_L1TD1_5end | |description=CAGE_peak_5_at_L1TD1_5end | ||
|id=chr1:62672658..62672669,+ | |id=chr1:62672658..62672669,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.07e-34!5;CL:0000039!7.84e-34!7;CL:0000586!7.84e-34!7;CL:0000540!3.40e-11!6;CL:0000031!3.40e-11!6;CL:0000404!3.40e-11!6;CL:0002541!8.58e-10!3;CL:0000047!1.65e-08!8;CL:0002336!1.06e-07!1;CL:0002261!1.06e-07!1;CL:0002170!1.06e-07!1;CL:0000221!1.47e-07!71;CL:0000148!8.40e-07!10;CL:0000541!8.40e-07!10 | |ontology_enrichment_celltype=CL:0002322!1.07e-34!5;CL:0000039!7.84e-34!7;CL:0000586!7.84e-34!7;CL:0000540!3.40e-11!6;CL:0000031!3.40e-11!6;CL:0000404!3.40e-11!6;CL:0002541!8.58e-10!3;CL:0000047!1.65e-08!8;CL:0002336!1.06e-07!1;CL:0002261!1.06e-07!1;CL:0002170!1.06e-07!1;CL:0000221!1.47e-07!71;CL:0000148!8.40e-07!10;CL:0000541!8.40e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.74e-82;5!CL:0002321;1.55e-27;15!CL:0000540;1.14e-25;6!CL:0000404;1.14e-25;6!CL:0000148;1.46e-15;10!CL:0000147;2.67e-11;14!CL:0000039;2.70e-10;7!CL:0000586;2.70e-10;7!CL:0000710;4.41e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.75e-82,5;CL:0000540,9.27e-26,6;CL:0000031,9.27e-26,6;CL:0000404,9.27e-26,6;CL:0000047,1.66e-19,8;CL:0000148,1.57e-15,10;CL:0000541,1.57e-15,10;CL:0000147,2.82e-11,14;CL:0000039,2.70e-10,7;CL:0000586,2.70e-10,7;CL:0000133,1.19e-09,59;CL:0000710,4.57e-08,20;CL:0000221,6.50e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.14e-25;6!UBERON:0009117;1.79e-07;10!UBERON:0005564;1.79e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!2.18e-18!22;DOID:2994!2.18e-18!22 | |ontology_enrichment_disease=DOID:3095!2.18e-18!22;DOID:2994!2.18e-18!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.29e-07;22!DOID:2994;2.29e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.31e-07,22;DOID:2994,2.31e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.82e-14!8;UBERON:0003135!4.24e-10!11;UBERON:0000476!8.58e-10!3;UBERON:0000920!8.58e-10!3 | |ontology_enrichment_uberon=UBERON:0000473!7.82e-14!8;UBERON:0003135!4.24e-10!11;UBERON:0000476!8.58e-10!3;UBERON:0000920!8.58e-10!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.55e-09;49!UBERON:0000473;4.02e-09;8!UBERON:0003135;7.15e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.02e-09,8;UBERON:0003135,7.15e-07,11 | |||
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|short_description=p5@L1TD1 | |short_description=p5@L1TD1 | ||
}} | }} |
Latest revision as of 19:35, 18 September 2015
Short description: | p5@L1TD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_L1TD1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 50bp_to_AK001746_5end |
EntrezGene: | L1TD1 |
HGNC: | 25595 |
UniProt: | Q5T7N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.75e-82 | 5 |
neuron | 9.27e-26 | 6 |
neuroblast | 9.27e-26 | 6 |
electrically signaling cell | 9.27e-26 | 6 |
neuronal stem cell | 1.66e-19 | 8 |
melanocyte | 1.57e-15 | 10 |
melanoblast | 1.57e-15 | 10 |
pigment cell | 2.82e-11 | 14 |
germ line cell | 2.70e-10 | 7 |
germ cell | 2.70e-10 | 7 |
neurectodermal cell | 1.19e-09 | 59 |
neurecto-epithelial cell | 4.57e-08 | 20 |
ectodermal cell | 6.50e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 4.02e-09 | 8 |
male reproductive organ | 7.15e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.31e-07 | 22 |
germ cell cancer | 2.31e-07 | 22 |