FFCP PHASE1:Hg19::chr12:51422113..51422122,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4891 | |EntrezGene=4891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10908 | |HGNC=10908 | ||
|TSSclassifier=strong | |||
|UniProt=P49281 | |UniProt=P49281 | ||
|association_with_transcript=-55bp_to_ENST00000394904,NM_001174125,uc001rxk.1_5end | |association_with_transcript=-55bp_to_ENST00000394904,NM_001174125,uc001rxk.1_5end | ||
|cluster_id=chr12:51422113..51422122,- | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_13_at_SLC11A2_5end | |description=CAGE_peak_13_at_SLC11A2_5end | ||
|id=chr12:51422113..51422122,- | |id=chr12:51422113..51422122,- | ||
|ontology_enrichment_celltype=CL:0002541!5.24e-11!3;CL:0002150!3.82e-09!3;CL:0000861!3.82e-09!3 | |ontology_enrichment_celltype=CL:0002541!5.24e-11!3;CL:0002150!3.82e-09!3;CL:0000861!3.82e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.83e-14;3!CL:0000039;6.04e-07;7!CL:0000586;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.09e-14,3;CL:0000039,5.70e-07,7;CL:0000586,5.70e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.84e-09!106;DOID:0050687!1.30e-07!143 | |ontology_enrichment_disease=DOID:305!6.84e-09!106;DOID:0050687!1.30e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!5.24e-11!3;UBERON:0000920!5.24e-11!3;UBERON:0001007!1.49e-09!155;UBERON:0001555!1.49e-09!155;UBERON:0007026!1.49e-09!155;UBERON:0004119!5.24e-09!169;UBERON:0000925!5.24e-09!169;UBERON:0006595!5.24e-09!169;UBERON:0004921!7.81e-09!129;UBERON:0004185!7.81e-09!129;UBERON:0003124!8.37e-08!7;UBERON:0003127!4.19e-07!2 | |ontology_enrichment_uberon=UBERON:0000476!5.24e-11!3;UBERON:0000920!5.24e-11!3;UBERON:0001007!1.49e-09!155;UBERON:0001555!1.49e-09!155;UBERON:0007026!1.49e-09!155;UBERON:0004119!5.24e-09!169;UBERON:0000925!5.24e-09!169;UBERON:0006595!5.24e-09!169;UBERON:0004921!7.81e-09!129;UBERON:0004185!7.81e-09!129;UBERON:0003124!8.37e-08!7;UBERON:0003127!4.19e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.83e-14;3!UBERON:0000920;1.83e-14;3!UBERON:0000160;7.75e-10;17!UBERON:0002108;3.22e-09;4!UBERON:0005409;6.52e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.09e-14,3;UBERON:0000160,7.76e-10,17;UBERON:0002108,3.22e-09,4;UBERON:0005409,4.15e-07,25;UBERON:0003124,6.39e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0.23056390438806,0.718061155278177,1.95565269459615,0.638002319463839,0.274792780205587,1.06606955203727,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0.282706142867882,0,0.995261931078505,0.353830258013357,2.4441205797345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0.586654148204409,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.236349546921671,0.247247575143499,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.308696632431779,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0.23056390438806,0.718061155278177,1.95565269459615,0.638002319463839,0.274792780205587,1.06606955203727,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0.282706142867882,0,0.995261931078505,0.353830258013357,2.4441205797345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0.586654148204409,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.236349546921671,0.247247575143499,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.308696632431779,1.09279780251979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p13@SLC11A2 | |short_description=p13@SLC11A2 | ||
}} | }} |
Latest revision as of 19:28, 18 September 2015
Short description: | p13@SLC11A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SLC11A2_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | -55bp_to_ENST00000394904, NM_001174125, uc001rxk.1_5end |
EntrezGene: | SLC11A2 |
HGNC: | 10908 |
UniProt: | P49281 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.09e-14 | 3 |
germ line cell | 5.70e-07 | 7 |
germ cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.09e-14 | 3 |
intestine | 7.76e-10 | 17 |
small intestine | 3.22e-09 | 4 |
gastrointestinal system | 4.15e-07 | 25 |
chorion | 6.39e-07 | 7 |