FFCP PHASE1:Hg19::chr15:69373184..69373197,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283673 | |EntrezGene=283673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26596 | |HGNC=26596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558147,NR_026949,uc002arv.2_5end | |association_with_transcript=0bp_to_ENST00000558147,NR_026949,uc002arv.2_5end | ||
|cluster_id=chr15:69373184..69373197,+ | |||
|coexpression_cluster_id=C2169 | |coexpression_cluster_id=C2169 | ||
|description=CAGE_peak_2_at_LINC00277_5end | |description=CAGE_peak_2_at_LINC00277_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002139!8.06e-07!24 | |ontology_enrichment_celltype=CL:0002139!8.06e-07!24 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!5.16e-09!10 | |ontology_enrichment_disease=DOID:171!5.16e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;3.56e-45;10!DOID:3095;1.10e-20;22!DOID:2994;1.10e-20;22!DOID:4556;2.19e-07;3 | |ontology_enrichment_disease_v019=DOID:171;3.56e-45;10!DOID:3095;1.10e-20;22!DOID:2994;1.10e-20;22!DOID:4556;2.19e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:171,3.56e-45,10;DOID:3095,1.10e-20,22;DOID:2994,1.10e-20,22;DOID:4556,2.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002616!2.56e-21!59;UBERON:0001049!1.17e-18!57;UBERON:0005068!1.17e-18!57;UBERON:0006241!1.17e-18!57;UBERON:0007135!1.17e-18!57;UBERON:0000955!2.08e-18!69;UBERON:0006238!2.08e-18!69;UBERON:0002780!4.85e-17!41;UBERON:0001890!4.85e-17!41;UBERON:0006240!4.85e-17!41;UBERON:0001893!5.52e-17!34;UBERON:0002346!7.66e-17!90;UBERON:0003080!1.61e-16!42;UBERON:0000073!4.03e-16!94;UBERON:0001016!4.03e-16!94;UBERON:0001869!4.69e-16!32;UBERON:0005743!7.10e-16!86;UBERON:0002791!1.04e-15!33;UBERON:0001017!1.14e-15!82;UBERON:0007023!4.88e-14!115;UBERON:0001950!1.24e-13!20;UBERON:0002020!3.67e-13!34;UBERON:0003528!3.67e-13!34;UBERON:0003075!2.17e-12!86;UBERON:0007284!2.17e-12!86;UBERON:0002619!3.37e-12!22;UBERON:0003056!4.49e-11!61;UBERON:0000924!6.19e-11!173;UBERON:0006601!6.19e-11!173;UBERON:0000956!1.82e-10!25;UBERON:0000203!1.82e-10!25;UBERON:0000369!1.95e-09!4;UBERON:0002435!1.95e-09!4;UBERON:0000204!1.95e-09!4;UBERON:0010082!1.95e-09!4;UBERON:0000033!7.94e-09!123;UBERON:0004121!4.01e-08!169;UBERON:0000153!4.28e-08!129;UBERON:0007811!4.28e-08!129;UBERON:0001896!7.87e-08!3;UBERON:0005290!7.87e-08!3;UBERON:0010096!7.87e-08!3;UBERON:0005383!1.26e-07!3;UBERON:0005382!1.26e-07!3;UBERON:0000025!1.86e-07!194;UBERON:0004111!6.35e-07!241 | |ontology_enrichment_uberon=UBERON:0002616!2.56e-21!59;UBERON:0001049!1.17e-18!57;UBERON:0005068!1.17e-18!57;UBERON:0006241!1.17e-18!57;UBERON:0007135!1.17e-18!57;UBERON:0000955!2.08e-18!69;UBERON:0006238!2.08e-18!69;UBERON:0002780!4.85e-17!41;UBERON:0001890!4.85e-17!41;UBERON:0006240!4.85e-17!41;UBERON:0001893!5.52e-17!34;UBERON:0002346!7.66e-17!90;UBERON:0003080!1.61e-16!42;UBERON:0000073!4.03e-16!94;UBERON:0001016!4.03e-16!94;UBERON:0001869!4.69e-16!32;UBERON:0005743!7.10e-16!86;UBERON:0002791!1.04e-15!33;UBERON:0001017!1.14e-15!82;UBERON:0007023!4.88e-14!115;UBERON:0001950!1.24e-13!20;UBERON:0002020!3.67e-13!34;UBERON:0003528!3.67e-13!34;UBERON:0003075!2.17e-12!86;UBERON:0007284!2.17e-12!86;UBERON:0002619!3.37e-12!22;UBERON:0003056!4.49e-11!61;UBERON:0000924!6.19e-11!173;UBERON:0006601!6.19e-11!173;UBERON:0000956!1.82e-10!25;UBERON:0000203!1.82e-10!25;UBERON:0000369!1.95e-09!4;UBERON:0002435!1.95e-09!4;UBERON:0000204!1.95e-09!4;UBERON:0010082!1.95e-09!4;UBERON:0000033!7.94e-09!123;UBERON:0004121!4.01e-08!169;UBERON:0000153!4.28e-08!129;UBERON:0007811!4.28e-08!129;UBERON:0001896!7.87e-08!3;UBERON:0005290!7.87e-08!3;UBERON:0010096!7.87e-08!3;UBERON:0005383!1.26e-07!3;UBERON:0005382!1.26e-07!3;UBERON:0000025!1.86e-07!194;UBERON:0004111!6.35e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.23e-72;4!UBERON:0000923;2.23e-72;4!UBERON:0010316;2.23e-72;4!UBERON:0005291;2.23e-72;4!UBERON:0002050;4.82e-58;5!UBERON:0005423;4.82e-58;5!UBERON:0002298;7.33e-13;6!UBERON:0000988;2.97e-07;3!UBERON:0001896;2.97e-07;3!UBERON:0005290;2.97e-07;3!UBERON:0004733;6.94e-07;12!UBERON:0002028;6.94e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0002346;2.23e-72;4!UBERON:0000923;2.23e-72;4!UBERON:0010316;2.23e-72;4!UBERON:0005291;2.23e-72;4!UBERON:0002050;4.82e-58;5!UBERON:0005423;4.82e-58;5!UBERON:0002298;7.33e-13;6!UBERON:0000988;2.97e-07;3!UBERON:0001896;2.97e-07;3!UBERON:0005290;2.97e-07;3!UBERON:0004733;6.94e-07;12!UBERON:0002028;6.94e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,7.33e-13,6;UBERON:0002346,7.64e-10,86;UBERON:0000988,2.79e-07,3;UBERON:0001896,3.16e-07,3;UBERON:0005290,3.16e-07,3;UBERON:0010096,3.16e-07,3;UBERON:0004733,6.94e-07,12;UBERON:0002028,6.94e-07,12;UBERON:0007277,6.94e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,1.03423011972439,5.54048765428183,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.104909176269996,0,4.66147082265396,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.1251909307065,1.14681839138014,0.221858103073705,0.124192805882767,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,2.04445724412665,0,3.3946505990805,5.10179808244039,5.7010451559141,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.253663240775627,0,0,0,1.23109871051734,0,0,0.336283722218824,0,0.227662191351298,0,0,0,1.35939465953663,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,1.03423011972439,5.54048765428183,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.104909176269996,0,4.66147082265396,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.1251909307065,1.14681839138014,0.221858103073705,0.124192805882767,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,2.04445724412665,0,3.3946505990805,5.10179808244039,5.7010451559141,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.253663240775627,0,0,0,1.23109871051734,0,0,0.336283722218824,0,0.227662191351298,0,0,0,1.35939465953663,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LINC00277 | |short_description=p2@LINC00277 | ||
}} | }} |
Latest revision as of 19:23, 18 September 2015
Short description: | p2@LINC00277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00277_5end |
Coexpression cluster: | C2169_large_neuroectodermal_neuroblastoma_carcinoid_cerebellum_pineal_occipital |
Association with transcript: | 0bp_to_ENST00000558147, NR_026949, uc002arv.2_5end |
EntrezGene: | LINC00277 |
HGNC: | 26596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 7.33e-13 | 6 |
neurectoderm | 7.64e-10 | 86 |
pons | 2.79e-07 | 3 |
medulla oblongata | 3.16e-07 | 3 |
myelencephalon | 3.16e-07 | 3 |
future myelencephalon | 3.16e-07 | 3 |
segmental subdivision of hindbrain | 6.94e-07 | 12 |
hindbrain | 6.94e-07 | 12 |
presumptive hindbrain | 6.94e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.56e-45 | 10 |
germ cell and embryonal cancer | 1.10e-20 | 22 |
germ cell cancer | 1.10e-20 | 22 |
lung large cell carcinoma | 2.19e-07 | 3 |