FFCP PHASE1:Hg19::chr15:69339407..69339410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79400 | |EntrezGene=79400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14874 | |HGNC=14874 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000529367_5end | |association_with_transcript=-18bp_to_ENST00000529367_5end | ||
|cluster_id=chr15:69339407..69339410,+ | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_3_at_NOX5_5end | |description=CAGE_peak_3_at_NOX5_5end | ||
|id=chr15:69339407..69339410,+ | |id=chr15:69339407..69339410,+ | ||
|ontology_enrichment_celltype=CL:0002603!2.69e-12!3;CL:0002379!4.09e-10!1;CL:0000342!4.46e-10!1;CL:0002565!4.46e-10!1;CL:1001319!2.46e-09!1;CL:1000600!2.46e-09!1;CL:0000066!1.77e-07!254 | |ontology_enrichment_celltype=CL:0002603!2.69e-12!3;CL:0002379!4.09e-10!1;CL:0000342!4.46e-10!1;CL:0002565!4.46e-10!1;CL:1001319!2.46e-09!1;CL:1000600!2.46e-09!1;CL:0000066!1.77e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002379;2.58e-34;1!CL:0000342;3.61e-34;1!CL:0002565;3.61e-34;1!CL:0002603;2.89e-12;3!CL:0000306;1.57e-09;4!CL:0002222;1.57e-09;4!CL:0002224;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.58e-34,1;CL:0000342,3.61e-34,1;CL:0002565,3.61e-34,1;CL:0002603,2.89e-12,3;CL:0000306,1.44e-09,4;CL:0002222,1.44e-09,4;CL:0002224,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.85e-12;3!UBERON:0003353;1.85e-12;3 | |||
|ontology_enrichment_disease=DOID:3620!4.09e-10!1;DOID:3565!4.09e-10!1;DOID:0060085!6.31e-10!1;DOID:3165!6.31e-10!1;DOID:0060121!6.31e-10!1;DOID:2438!6.31e-10!1;DOID:4418!6.31e-10!1 | |ontology_enrichment_disease=DOID:3620!4.09e-10!1;DOID:3565!4.09e-10!1;DOID:0060085!6.31e-10!1;DOID:3165!6.31e-10!1;DOID:0060121!6.31e-10!1;DOID:2438!6.31e-10!1;DOID:4418!6.31e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:3620;2.58e-34;1!DOID:3565;2.58e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.58e-34,1;DOID:3565,2.58e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002203!2.12e-13!6;UBERON:0001768!2.12e-13!6;UBERON:0002506!4.46e-10!1;UBERON:0001769!4.46e-10!1;UBERON:0001801!5.29e-10!14;UBERON:0000162!9.03e-10!14;UBERON:0001353!9.03e-10!14;UBERON:0000163!9.03e-10!14;UBERON:0006866!9.03e-10!14;UBERON:0000164!9.03e-10!14;UBERON:0000931!9.03e-10!14;UBERON:0000488!1.49e-09!4;UBERON:0004645!2.46e-09!1;UBERON:0001256!2.46e-09!1;UBERON:0001259!2.46e-09!1;UBERON:0004122!3.95e-09!15;UBERON:0005153!1.03e-07!37;UBERON:0007625!1.34e-07!11;UBERON:0002200!1.57e-07!11;UBERON:0006876!1.57e-07!11;UBERON:0002367!1.71e-07!11;UBERON:0010147!1.71e-07!11;UBERON:0009846!1.71e-07!11;UBERON:0003353!1.71e-07!11;UBERON:0004902!1.71e-07!11;UBERON:0003820!1.71e-07!11;UBERON:0009847!1.71e-07!11;UBERON:0000019!2.11e-07!19;UBERON:0000047!2.11e-07!19;UBERON:0004088!2.11e-07!19;UBERON:0003072!2.11e-07!19;UBERON:0003071!2.11e-07!19;UBERON:0004128!2.11e-07!19;UBERON:0001046!3.11e-07!19;UBERON:0005085!3.18e-07!29;UBERON:0000970!4.90e-07!20;UBERON:0003937!6.63e-07!12;UBERON:0005399!6.63e-07!12 | |ontology_enrichment_uberon=UBERON:0002203!2.12e-13!6;UBERON:0001768!2.12e-13!6;UBERON:0002506!4.46e-10!1;UBERON:0001769!4.46e-10!1;UBERON:0001801!5.29e-10!14;UBERON:0000162!9.03e-10!14;UBERON:0001353!9.03e-10!14;UBERON:0000163!9.03e-10!14;UBERON:0006866!9.03e-10!14;UBERON:0000164!9.03e-10!14;UBERON:0000931!9.03e-10!14;UBERON:0000488!1.49e-09!4;UBERON:0004645!2.46e-09!1;UBERON:0001256!2.46e-09!1;UBERON:0001259!2.46e-09!1;UBERON:0004122!3.95e-09!15;UBERON:0005153!1.03e-07!37;UBERON:0007625!1.34e-07!11;UBERON:0002200!1.57e-07!11;UBERON:0006876!1.57e-07!11;UBERON:0002367!1.71e-07!11;UBERON:0010147!1.71e-07!11;UBERON:0009846!1.71e-07!11;UBERON:0003353!1.71e-07!11;UBERON:0004902!1.71e-07!11;UBERON:0003820!1.71e-07!11;UBERON:0009847!1.71e-07!11;UBERON:0000019!2.11e-07!19;UBERON:0000047!2.11e-07!19;UBERON:0004088!2.11e-07!19;UBERON:0003072!2.11e-07!19;UBERON:0003071!2.11e-07!19;UBERON:0004128!2.11e-07!19;UBERON:0001046!3.11e-07!19;UBERON:0005085!3.18e-07!29;UBERON:0000970!4.90e-07!20;UBERON:0003937!6.63e-07!12;UBERON:0005399!6.63e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002506;3.61e-34;1!UBERON:0001769;3.61e-34;1!UBERON:0007625;5.42e-13;11!UBERON:0001801;1.99e-10;14!UBERON:0000488;1.32e-09;4!UBERON:0010077;1.57e-09;4!UBERON:0005389;1.57e-09;4!UBERON:0000484;1.57e-09;4!UBERON:0000965;1.57e-09;4!UBERON:0001803;1.57e-09;4!UBERON:0000019;6.15e-08;19!UBERON:0000047;6.15e-08;19!UBERON:0004088;6.15e-08;19!UBERON:0010230;6.15e-08;19!UBERON:0000970;1.38e-07;20!UBERON:0002104;2.86e-07;21!UBERON:0001456;2.86e-07;21!UBERON:0002203;8.02e-07;6!UBERON:0001768;8.02e-07;6!UBERON:0002200;8.02e-07;6!UBERON:0002037;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,3.61e-34,1;UBERON:0001769,3.61e-34,1;UBERON:0007625,5.10e-13,11;UBERON:0001801,1.90e-10,14;UBERON:0000488,1.32e-09,4;UBERON:0010077,1.44e-09,4;UBERON:0005389,1.44e-09,4;UBERON:0000484,1.44e-09,4;UBERON:0002546,1.44e-09,4;UBERON:0000965,1.44e-09,4;UBERON:0001803,1.44e-09,4;UBERON:0003073,1.44e-09,4;UBERON:0005426,1.44e-09,4;UBERON:0000019,1.33e-07,20;UBERON:0000047,1.33e-07,20;UBERON:0010312,1.33e-07,20;UBERON:0004088,1.33e-07,20;UBERON:0010230,1.33e-07,20;UBERON:0003072,1.33e-07,20;UBERON:0004128,1.33e-07,20;UBERON:0003071,1.33e-07,20;UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0001456,5.40e-07,22;UBERON:0002203,8.02e-07,6;UBERON:0001768,8.02e-07,6;UBERON:0002200,8.02e-07,6;UBERON:0002037,8.97e-07,6;UBERON:0006215,8.97e-07,6 | |||
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|short_description=p3@NOX5 | |short_description=p3@NOX5 | ||
}} | }} |
Latest revision as of 19:22, 18 September 2015
Short description: | p3@NOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NOX5_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | -18bp_to_ENST00000529367_5end |
EntrezGene: | NOX5 |
HGNC: | 14874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.58e-34 | 1 |
pigment cell (sensu Vertebrata) | 3.61e-34 | 1 |
iris pigment epithelial cell | 3.61e-34 | 1 |
astrocyte of the cerebellum | 2.89e-12 | 3 |
crystallin accumulating cell | 1.44e-09 | 4 |
vertebrate lens cell | 1.44e-09 | 4 |
lens epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 3.61e-34 | 1 |
iris | 3.61e-34 | 1 |
pigment epithelium of eye | 5.10e-13 | 11 |
anterior segment of eyeball | 1.90e-10 | 14 |
atypical epithelium | 1.32e-09 | 4 |
cuboidal epithelium | 1.44e-09 | 4 |
transparent eye structure | 1.44e-09 | 4 |
simple cuboidal epithelium | 1.44e-09 | 4 |
cranial placode | 1.44e-09 | 4 |
lens of camera-type eye | 1.44e-09 | 4 |
epithelium of lens | 1.44e-09 | 4 |
lens placode | 1.44e-09 | 4 |
lens vesicle | 1.44e-09 | 4 |
camera-type eye | 1.33e-07 | 20 |
simple eye | 1.33e-07 | 20 |
immature eye | 1.33e-07 | 20 |
ocular region | 1.33e-07 | 20 |
eyeball of camera-type eye | 1.33e-07 | 20 |
optic cup | 1.33e-07 | 20 |
optic vesicle | 1.33e-07 | 20 |
eye primordium | 1.33e-07 | 20 |
eye | 2.77e-07 | 21 |
visual system | 2.77e-07 | 21 |
face | 5.40e-07 | 22 |
vasculature of eye | 8.02e-07 | 6 |
uvea | 8.02e-07 | 6 |
vasculature of head | 8.02e-07 | 6 |
cerebellum | 8.97e-07 | 6 |
rhombic lip | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.58e-34 | 1 |
meningioma | 2.58e-34 | 1 |