FFCP PHASE1:Hg19::chr17:15942934..15942957,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9611 | |EntrezGene=9611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7672 | |HGNC=7672 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPY1 | |UniProt=Q9UPY1 | ||
|association_with_transcript=-154bp_to_AB028451_5end | |association_with_transcript=-154bp_to_AB028451_5end | ||
|cluster_id=chr17:15942934..15942957,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_NCOR1_5end | |description=CAGE_peak_5_at_NCOR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.53e-17;12!CL:0000346;1.46e-08;3!CL:1000428;1.46e-08;3 | |ontology_enrichment_celltype_v019=CL:0000182;2.53e-17;12!CL:0000346;1.46e-08;3!CL:1000428;1.46e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-17,12;CL:0000346,1.51e-08,3;CL:1000428,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.31e-09;11!UBERON:0009497;9.35e-08;13 | |ontology_enrichment_development_v019=UBERON:0004161;5.31e-09;11!UBERON:0009497;9.35e-08;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;3.43e-12;2 | |ontology_enrichment_disease_v019=DOID:3307;3.43e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,3.24e-12,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.21e-29;19!UBERON:0006925;3.21e-29;19!UBERON:0002423;2.72e-22;25!UBERON:0002365;5.45e-18;31!UBERON:0002330;5.45e-18;31!UBERON:0002368;1.44e-15;33!UBERON:0000949;2.46e-11;43!UBERON:0000412;1.46e-08;3!UBERON:0001992;1.46e-08;3!UBERON:0005172;3.17e-08;52!UBERON:0005173;3.17e-08;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.21e-29;19!UBERON:0006925;3.21e-29;19!UBERON:0002423;2.72e-22;25!UBERON:0002365;5.45e-18;31!UBERON:0002330;5.45e-18;31!UBERON:0002368;1.44e-15;33!UBERON:0000949;2.46e-11;43!UBERON:0000412;1.46e-08;3!UBERON:0001992;1.46e-08;3!UBERON:0005172;3.17e-08;52!UBERON:0005173;3.17e-08;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.21e-29,19;UBERON:0006925,3.21e-29,19;UBERON:0008836,3.21e-29,19;UBERON:0008835,2.76e-25,22;UBERON:0003894,2.76e-25,22;UBERON:0009854,3.35e-24,23;UBERON:0007499,2.72e-22,25;UBERON:0009497,2.72e-22,25;UBERON:0000015,2.72e-22,25;UBERON:0002423,2.72e-22,25;UBERON:0006235,2.72e-22,25;UBERON:0004161,2.72e-22,25;UBERON:0009856,1.91e-21,26;UBERON:0002365,4.92e-18,31;UBERON:0002330,4.92e-18,31;UBERON:0002368,5.28e-16,35;UBERON:0000949,1.70e-12,45;UBERON:0003929,1.92e-10,54;UBERON:0005172,1.92e-10,54;UBERON:0005173,1.92e-10,54;UBERON:0002530,1.43e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0000412,1.51e-08,3;UBERON:0001992,1.51e-08,3;UBERON:0005911,6.51e-07,82 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,31.6887587054577,2.94848165003288,18.9052770138049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,10.7162652113631,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3328379017581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,17.732820275048,2.65013777824443,0.129282956361551,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,31.6887587054577,2.94848165003288,18.9052770138049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,10.7162652113631,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3328379017581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,17.732820275048,2.65013777824443,0.129282956361551,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p5@NCOR1 | |short_description=p5@NCOR1 | ||
}} | }} |
Latest revision as of 19:16, 18 September 2015
Short description: | p5@NCOR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NCOR1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -154bp_to_AB028451_5end |
EntrezGene: | NCOR1 |
HGNC: | 7672 |
UniProt: | Q9UPY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-17 | 12 |
hair follicle dermal papilla cell | 1.51e-08 | 3 |
stem cell of epidermis | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.21e-29 | 19 |
digestive gland | 3.21e-29 | 19 |
liver bud | 3.21e-29 | 19 |
hepatic diverticulum | 2.76e-25 | 22 |
liver primordium | 2.76e-25 | 22 |
digestive tract diverticulum | 3.35e-24 | 23 |
epithelial sac | 2.72e-22 | 25 |
epithelium of foregut-midgut junction | 2.72e-22 | 25 |
anatomical boundary | 2.72e-22 | 25 |
hepatobiliary system | 2.72e-22 | 25 |
foregut-midgut junction | 2.72e-22 | 25 |
septum transversum | 2.72e-22 | 25 |
sac | 1.91e-21 | 26 |
exocrine gland | 4.92e-18 | 31 |
exocrine system | 4.92e-18 | 31 |
endocrine gland | 5.28e-16 | 35 |
endocrine system | 1.70e-12 | 45 |
gut epithelium | 1.92e-10 | 54 |
abdomen element | 1.92e-10 | 54 |
abdominal segment element | 1.92e-10 | 54 |
gland | 1.43e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
dermal papilla | 1.51e-08 | 3 |
papillary layer of dermis | 1.51e-08 | 3 |
endo-epithelium | 6.51e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.24e-12 | 2 |