FFCP PHASE1:Hg19::chr7:45928140..45928150,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3484 | |EntrezGene=3484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5469 | |HGNC=5469 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6H2 | |UniProt=C9J6H2 | ||
|association_with_transcript=44bp_to_ENST00000468955_5end | |association_with_transcript=44bp_to_ENST00000468955_5end | ||
|cluster_id=chr7:45928140..45928150,+ | |||
|coexpression_cluster_id=C4688 | |||
|description=CAGE_peak_3_at_IGFBP1_5end | |description=CAGE_peak_3_at_IGFBP1_5end | ||
|id=chr7:45928140..45928150,+ | |id=chr7:45928140..45928150,+ | ||
|ontology_enrichment_celltype=CL:0000499!2.73e-08!27;CL:0002575!6.60e-07!2;CL:0002549!8.31e-07!2 | |ontology_enrichment_celltype=CL:0000499!2.73e-08!27;CL:0002575!6.60e-07!2;CL:0002549!8.31e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;8.94e-25;3!CL:0000349;1.68e-15;19!CL:0002577;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.95e-25,3;CL:0000349,1.61e-15,19;CL:0002577,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.30e-19;1!UBERON:0004161;1.84e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003124!1.99e-07!7;UBERON:0003947!8.31e-07!2;UBERON:0005629!8.31e-07!2;UBERON:0005358!8.31e-07!2;UBERON:0001886!8.31e-07!2;UBERON:0004086!8.31e-07!2;UBERON:0005282!8.31e-07!2;UBERON:0005281!8.31e-07!2 | |ontology_enrichment_uberon=UBERON:0003124!1.99e-07!7;UBERON:0003947!8.31e-07!2;UBERON:0005629!8.31e-07!2;UBERON:0005358!8.31e-07!2;UBERON:0001886!8.31e-07!2;UBERON:0004086!8.31e-07!2;UBERON:0005282!8.31e-07!2;UBERON:0005281!8.31e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.94e-25;3!UBERON:0000920;8.94e-25;3!UBERON:0001987;4.70e-19;4!UBERON:0000478;7.05e-19;24!UBERON:0002107;4.05e-09;19!UBERON:0006925;4.05e-09;19!UBERON:0005631;4.04e-08;10!UBERON:0000158;4.04e-08;10!UBERON:0002423;4.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.51e-41,7;UBERON:0000920,8.95e-25,3;UBERON:0005631,6.28e-21,14;UBERON:0000158,6.28e-21,14;UBERON:0001987,3.92e-19,4;UBERON:0004340,3.92e-19,4;UBERON:0000478,6.79e-19,24;UBERON:0002107,4.05e-09,19;UBERON:0006925,4.05e-09,19;UBERON:0008836,4.05e-09,19;UBERON:0008835,5.93e-08,22;UBERON:0003894,5.93e-08,22;UBERON:0009854,1.24e-07,23;UBERON:0007499,4.60e-07,25;UBERON:0009497,4.60e-07,25;UBERON:0000015,4.60e-07,25;UBERON:0002423,4.60e-07,25;UBERON:0006235,4.60e-07,25;UBERON:0004161,4.60e-07,25;UBERON:0009856,8.20e-07,26;UBERON:0000949,9.78e-07,45 | |||
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| ||
|short_description=p3@IGFBP1 | |short_description=p3@IGFBP1 | ||
}} | }} |
Latest revision as of 19:08, 18 September 2015
Short description: | p3@IGFBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IGFBP1_5end |
Coexpression cluster: | C4688_tubular_placenta_chorionic_liver_Multipotent_lung_mesenchymal |
Association with transcript: | 44bp_to_ENST00000468955_5end |
EntrezGene: | IGFBP1 |
HGNC: | 5469 |
UniProt: | C9J6H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.95e-25 | 3 |
extraembryonic cell | 1.61e-15 | 19 |
placental epithelial cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.51e-41 | 7 |
egg chorion | 8.95e-25 | 3 |
extraembryonic membrane | 6.28e-21 | 14 |
membranous layer | 6.28e-21 | 14 |
placenta | 3.92e-19 | 4 |
allantois | 3.92e-19 | 4 |
extraembryonic structure | 6.79e-19 | 24 |
liver | 4.05e-09 | 19 |
digestive gland | 4.05e-09 | 19 |
liver bud | 4.05e-09 | 19 |
hepatic diverticulum | 5.93e-08 | 22 |
liver primordium | 5.93e-08 | 22 |
digestive tract diverticulum | 1.24e-07 | 23 |
epithelial sac | 4.60e-07 | 25 |
epithelium of foregut-midgut junction | 4.60e-07 | 25 |
anatomical boundary | 4.60e-07 | 25 |
hepatobiliary system | 4.60e-07 | 25 |
foregut-midgut junction | 4.60e-07 | 25 |
septum transversum | 4.60e-07 | 25 |
sac | 8.20e-07 | 26 |
endocrine system | 9.78e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.43e-10 | 2 |