FFCP PHASE1:Hg19::chr21:45937433..45937447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16428 | |HGNC=16428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000354333_5end | |association_with_transcript=-52bp_to_ENST00000354333_5end | ||
|cluster_id=chr21:45937433..45937447,+ | |||
|coexpression_cluster_id=C4083 | |coexpression_cluster_id=C4083 | ||
|description=CAGE_peak_3_at_C21orf90_5end | |description=CAGE_peak_3_at_C21orf90_5end | ||
|id=chr21:45937433..45937447,+ | |id=chr21:45937433..45937447,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.55e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.55e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002563;3.00e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.38e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.95e-21!235;DOID:14566!4.28e-20!239;DOID:0050687!1.14e-15!143;DOID:0050686!1.39e-10!137;DOID:305!2.02e-08!106 | |ontology_enrichment_disease=DOID:162!4.95e-21!235;DOID:14566!4.28e-20!239;DOID:0050687!1.14e-15!143;DOID:0050686!1.39e-10!137;DOID:305!2.02e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:4960;6.02e-09;1!DOID:0070004;6.02e-09;1!DOID:6193;8.77e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,6.03e-09,1;DOID:0070004,6.03e-09,1;DOID:6193,1.10e-08,1;DOID:162,2.26e-08,235;DOID:14566,4.04e-08,239;DOID:0050687,3.19e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000955!5.12e-15!69;UBERON:0006238!5.12e-15!69;UBERON:0001017!4.96e-14!82;UBERON:0000073!2.01e-13!94;UBERON:0001016!2.01e-13!94;UBERON:0001049!2.63e-13!57;UBERON:0005068!2.63e-13!57;UBERON:0006241!2.63e-13!57;UBERON:0007135!2.63e-13!57;UBERON:0005743!6.85e-13!86;UBERON:0002616!2.74e-11!59;UBERON:0002780!7.32e-11!41;UBERON:0001890!7.32e-11!41;UBERON:0006240!7.32e-11!41;UBERON:0003080!1.83e-10!42;UBERON:0000153!3.94e-09!129;UBERON:0007811!3.94e-09!129;UBERON:0002020!5.03e-09!34;UBERON:0003528!5.03e-09!34;UBERON:0000033!6.66e-09!123;UBERON:0001893!1.35e-08!34;UBERON:0003075!3.33e-08!86;UBERON:0007284!3.33e-08!86;UBERON:0002791!5.51e-08!33;UBERON:0004121!1.59e-07!169;UBERON:0002346!1.75e-07!90;UBERON:0001869!3.46e-07!32;UBERON:0000924!4.41e-07!173;UBERON:0006601!4.41e-07!173;UBERON:0002619!8.02e-07!22 | |ontology_enrichment_uberon=UBERON:0000955!5.12e-15!69;UBERON:0006238!5.12e-15!69;UBERON:0001017!4.96e-14!82;UBERON:0000073!2.01e-13!94;UBERON:0001016!2.01e-13!94;UBERON:0001049!2.63e-13!57;UBERON:0005068!2.63e-13!57;UBERON:0006241!2.63e-13!57;UBERON:0007135!2.63e-13!57;UBERON:0005743!6.85e-13!86;UBERON:0002616!2.74e-11!59;UBERON:0002780!7.32e-11!41;UBERON:0001890!7.32e-11!41;UBERON:0006240!7.32e-11!41;UBERON:0003080!1.83e-10!42;UBERON:0000153!3.94e-09!129;UBERON:0007811!3.94e-09!129;UBERON:0002020!5.03e-09!34;UBERON:0003528!5.03e-09!34;UBERON:0000033!6.66e-09!123;UBERON:0001893!1.35e-08!34;UBERON:0003075!3.33e-08!86;UBERON:0007284!3.33e-08!86;UBERON:0002791!5.51e-08!33;UBERON:0004121!1.59e-07!169;UBERON:0002346!1.75e-07!90;UBERON:0001869!3.46e-07!32;UBERON:0000924!4.41e-07!173;UBERON:0006601!4.41e-07!173;UBERON:0002619!8.02e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.00e-08;4!UBERON:0001262;3.00e-08;4!UBERON:0004786;3.00e-08;4!UBERON:0004808;3.00e-08;4!UBERON:0001277;3.00e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.38e-08,4;UBERON:0001262,2.38e-08,4;UBERON:0004786,2.38e-08,4;UBERON:0004808,2.38e-08,4;UBERON:0001277,2.38e-08,4;UBERON:0000013,8.65e-07,5;UBERON:0002410,8.65e-07,5 | |||
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| ||
|short_description=p3@C21orf90 | |short_description=p3@C21orf90 | ||
}} | }} |
Latest revision as of 19:08, 18 September 2015
Short description: | p3@C21orf90 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C21orf90_5end |
Coexpression cluster: | C4083_myeloma_bronchioalveolar_cervical_neuroblastoma_lymphangiectasia_colon_small |
Association with transcript: | -52bp_to_ENST00000354333_5end |
EntrezGene: | NA |
HGNC: | 16428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.38e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.38e-08 | 4 |
wall of intestine | 2.38e-08 | 4 |
gastrointestinal system mucosa | 2.38e-08 | 4 |
gastrointestinal system epithelium | 2.38e-08 | 4 |
intestinal epithelium | 2.38e-08 | 4 |
sympathetic nervous system | 8.65e-07 | 5 |
autonomic nervous system | 8.65e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 6.03e-09 | 1 |
myeloma | 6.03e-09 | 1 |
epithelioid sarcoma | 1.10e-08 | 1 |
cancer | 2.26e-08 | 235 |
disease of cellular proliferation | 4.04e-08 | 239 |
cell type cancer | 3.19e-07 | 143 |