FFCP PHASE1:Hg19::chr5:76011919..76012005,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2149 | |EntrezGene=2149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3537 | |HGNC=3537 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAL6 | |UniProt=G3XAL6 | ||
|association_with_transcript=-18bp_to_ENST00000505600_5end | |association_with_transcript=-18bp_to_ENST00000505600_5end | ||
|cluster_id=chr5:76011919..76012005,+ | |||
|description=CAGE_peak_1_at_F2R_5end | |description=CAGE_peak_1_at_F2R_5end | ||
|id=chr5:76011919..76012005,+ | |id=chr5:76011919..76012005,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.54e-21!180;CL:0000220!1.23e-19!246;CL:0002321!1.89e-19!248;CL:0000222!1.57e-18!119;CL:0002139!4.16e-14!24;CL:0000115!2.89e-13!35;CL:0000071!3.97e-11!18;CL:0002546!3.97e-11!18;CL:0000183!4.92e-11!59;CL:0002078!9.82e-11!44;CL:0000144!1.36e-10!625;CL:0000057!1.48e-10!75;CL:0002371!2.26e-10!591;CL:0000393!3.99e-10!60;CL:0000211!3.99e-10!60;CL:0000187!4.23e-10!54;CL:0000680!9.34e-10!57;CL:0000056!9.34e-10!57;CL:0000355!9.34e-10!57;CL:0000213!3.10e-08!57;CL:0000215!3.10e-08!57;CL:0000192!3.13e-08!42;CL:0000514!3.13e-08!42;CL:0002334!5.93e-07!12 | |ontology_enrichment_celltype=CL:0000055!5.54e-21!180;CL:0000220!1.23e-19!246;CL:0002321!1.89e-19!248;CL:0000222!1.57e-18!119;CL:0002139!4.16e-14!24;CL:0000115!2.89e-13!35;CL:0000071!3.97e-11!18;CL:0002546!3.97e-11!18;CL:0000183!4.92e-11!59;CL:0002078!9.82e-11!44;CL:0000144!1.36e-10!625;CL:0000057!1.48e-10!75;CL:0002371!2.26e-10!591;CL:0000393!3.99e-10!60;CL:0000211!3.99e-10!60;CL:0000187!4.23e-10!54;CL:0000680!9.34e-10!57;CL:0000056!9.34e-10!57;CL:0000355!9.34e-10!57;CL:0000213!3.10e-08!57;CL:0000215!3.10e-08!57;CL:0000192!3.13e-08!42;CL:0000514!3.13e-08!42;CL:0002334!5.93e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.11e-14;24!CL:0000115;7.57e-12;36!CL:0000071;3.90e-11;18!CL:0002078;1.64e-07;45!CL:0002334;5.82e-07;12!CL:0000192;7.07e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.14e-20,250;CL:0000222,1.68e-19,121;CL:0002139,4.04e-14,24;CL:0000115,8.21e-14,36;CL:0002078,3.51e-11,45;CL:0000071,3.88e-11,18;CL:0002546,3.88e-11,18;CL:0000057,7.57e-11,76;CL:0000393,1.26e-10,61;CL:0000211,1.26e-10,61;CL:0000187,1.29e-10,55;CL:0000680,2.95e-10,58;CL:0000056,2.95e-10,58;CL:0000355,2.95e-10,58;CL:0000192,9.66e-09,43;CL:0000514,9.66e-09,43;CL:0000213,1.29e-08,58;CL:0000215,1.29e-08,58;CL:0002334,5.86e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;3.90e-11;18!CL:0000514;7.07e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.33e-24!110;UBERON:0001009!1.45e-23!113;UBERON:0002049!1.57e-21!79;UBERON:0007798!1.57e-21!79;UBERON:0003914!1.77e-21!118;UBERON:0004872!3.84e-19!84;UBERON:0000055!7.47e-19!69;UBERON:0001981!2.70e-15!60;UBERON:0007500!2.70e-15!60;UBERON:0004537!2.70e-15!60;UBERON:0006965!2.70e-15!60;UBERON:0000490!3.28e-15!138;UBERON:0002100!9.66e-14!216;UBERON:0005256!2.23e-13!143;UBERON:0000477!3.39e-11!286;UBERON:0001986!3.97e-11!18;UBERON:0004638!3.97e-11!18;UBERON:0004852!3.97e-11!18;UBERON:0001637!4.23e-11!42;UBERON:0003509!4.23e-11!42;UBERON:0004572!4.23e-11!42;UBERON:0000487!5.02e-11!22;UBERON:0000914!2.92e-10!83;UBERON:0002329!2.92e-10!83;UBERON:0003077!2.92e-10!83;UBERON:0003059!2.92e-10!83;UBERON:0007282!2.92e-10!83;UBERON:0009618!2.92e-10!83;UBERON:0007285!2.92e-10!83;UBERON:0004573!5.13e-10!33;UBERON:0004571!5.13e-10!33;UBERON:0000475!1.07e-09!365;UBERON:0004111!2.08e-09!241;UBERON:0000119!3.60e-09!312;UBERON:0000483!5.09e-09!309;UBERON:0000481!8.14e-09!347;UBERON:0003103!1.05e-08!69;UBERON:0001134!1.07e-08!61;UBERON:0002036!1.07e-08!61;UBERON:0003082!1.07e-08!61;UBERON:0003104!1.57e-08!238;UBERON:0009142!1.57e-08!238;UBERON:0006914!2.46e-08!25;UBERON:0003886!2.63e-08!63;UBERON:0002385!2.67e-08!63;UBERON:0001015!2.67e-08!63;UBERON:0000383!2.67e-08!63;UBERON:0004290!3.79e-08!70;UBERON:0001444!4.75e-08!48;UBERON:0000947!6.59e-08!21;UBERON:0010191!6.59e-08!21;UBERON:0002417!7.89e-08!61;UBERON:0000916!7.89e-08!61;UBERON:0002553!2.64e-07!70;UBERON:0000486!4.43e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.90e-11;18!UBERON:0001986;3.90e-11;18!UBERON:0004852;3.90e-11;18!UBERON:0000487;5.09e-11;22!UBERON:0004573;1.37e-09;33!UBERON:0004571;1.37e-09;33!UBERON:0000055;2.54e-09;65!UBERON:0001637;4.51e-09;42!UBERON:0003509;4.51e-09;42!UBERON:0004572;4.51e-09;42!UBERON:0002049;1.63e-08;75!UBERON:0007798;1.63e-08;75!UBERON:0007500;1.63e-08;56!UBERON:0001981;1.63e-08;56!UBERON:0004537;1.63e-08;56!UBERON:0003914;1.83e-08;74!UBERON:0006914;2.82e-08;25!UBERON:0000947;6.72e-08;21!UBERON:0010191;6.72e-08;21!UBERON:0000490;7.23e-08;33!UBERON:0004535;1.92e-07;109 | |||
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| ||
|short_description=p1@F2R | |short_description=p1@F2R | ||
}} | }} |
Latest revision as of 18:43, 18 September 2015
Short description: | p1@F2R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_F2R_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000505600_5end |
EntrezGene: | F2R |
HGNC: | 3537 |
UniProt: | G3XAL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.14e-20 | 250 |
mesodermal cell | 1.68e-19 | 121 |
endothelial cell of vascular tree | 4.04e-14 | 24 |
endothelial cell | 8.21e-14 | 36 |
meso-epithelial cell | 3.51e-11 | 45 |
blood vessel endothelial cell | 3.88e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.88e-11 | 18 |
fibroblast | 7.57e-11 | 76 |
electrically responsive cell | 1.26e-10 | 61 |
electrically active cell | 1.26e-10 | 61 |
muscle cell | 1.29e-10 | 55 |
muscle precursor cell | 2.95e-10 | 58 |
myoblast | 2.95e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.95e-10 | 58 |
smooth muscle cell | 9.66e-09 | 43 |
smooth muscle myoblast | 9.66e-09 | 43 |
lining cell | 1.29e-08 | 58 |
barrier cell | 1.29e-08 | 58 |
preadipocyte | 5.86e-07 | 12 |