FFCP PHASE1:Hg19::chr5:75919155..75919191,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:75919155..75919191,- to FFCP PHASE1:Hg19::chr5:75919155..75919191,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2151 | |EntrezGene=2151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3539 | |HGNC=3539 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ13 | |UniProt=B4DQ13 | ||
|association_with_transcript=46bp_to_ENST00000504899,uc011csw.1_5end | |||
|cluster_id=chr5:75919155..75919191,- | |||
|coexpression_cluster_id=C2828 | |||
|description=CAGE_peak_3_at_F2RL2_5end | |||
|id=chr5:75919155..75919191,- | |||
|ontology_enrichment_celltype=CL:0000055!4.70e-25!180;CL:0000057!5.79e-18!75;CL:0000183!1.02e-12!59;CL:0000187!2.80e-12!54;CL:0000680!3.53e-12!57;CL:0000056!3.53e-12!57;CL:0000355!3.53e-12!57;CL:0000222!4.83e-10!119;CL:0000393!8.64e-10!60;CL:0000211!8.64e-10!60;CL:0000192!2.29e-09!42;CL:0000514!2.29e-09!42;CL:0002371!3.07e-08!591;CL:0000144!6.08e-08!625;CL:0000048!4.08e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.59e-07;12!CL:0002494;1.62e-07;16!CL:0000057;2.87e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.73e-18,76;CL:0000048,2.59e-09,427;CL:0000723,1.03e-08,433;CL:0000034,3.17e-08,441;CL:0002334,1.44e-07,12;CL:0002494,1.51e-07,16;CL:0000187,3.64e-07,55;CL:0000680,4.64e-07,58;CL:0000056,4.64e-07,58;CL:0000355,4.64e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.92e-13!83;UBERON:0002329!1.92e-13!83;UBERON:0003077!1.92e-13!83;UBERON:0003059!1.92e-13!83;UBERON:0007282!1.92e-13!83;UBERON:0009618!1.92e-13!83;UBERON:0007285!1.92e-13!83;UBERON:0005256!1.89e-11!143;UBERON:0000475!1.13e-10!365;UBERON:0004290!1.43e-10!70;UBERON:0002385!2.10e-10!63;UBERON:0001015!2.10e-10!63;UBERON:0000383!2.10e-10!63;UBERON:0001134!3.09e-10!61;UBERON:0002036!3.09e-10!61;UBERON:0003082!3.09e-10!61;UBERON:0001444!5.10e-10!48;UBERON:0000481!9.96e-10!347;UBERON:0000490!2.49e-09!138;UBERON:0002100!2.60e-09!216;UBERON:0002049!3.51e-09!79;UBERON:0007798!3.51e-09!79;UBERON:0003914!5.99e-09!118;UBERON:0004872!1.00e-08!84;UBERON:0004535!6.91e-08!110;UBERON:0001009!7.92e-08!113;UBERON:0000468!8.48e-08!659;UBERON:0000486!1.43e-07!82;UBERON:0001981!2.01e-07!60;UBERON:0007500!2.01e-07!60;UBERON:0004537!2.01e-07!60;UBERON:0006965!2.01e-07!60;UBERON:0003102!3.66e-07!95;UBERON:0000020!3.70e-07!23;UBERON:0000970!8.33e-07!20;UBERON:0000055!9.79e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000970;4.32e-10;20!UBERON:0001456;6.34e-10;21!UBERON:0000019;1.03e-09;19!UBERON:0000047;1.03e-09;19!UBERON:0004088;1.03e-09;19!UBERON:0010230;1.03e-09;19!UBERON:0002104;2.30e-09;21!UBERON:0007625;2.91e-09;11!UBERON:0000020;3.09e-09;23!UBERON:0001032;1.25e-08;24!UBERON:0004456;1.25e-08;24!UBERON:0001444;1.62e-08;48!UBERON:0000033;1.18e-07;50!UBERON:0007811;4.17e-07;52!UBERON:0001801;5.56e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001444,2.73e-11,49;UBERON:0000970,2.20e-09,21;UBERON:0002104,2.20e-09,21;UBERON:0000033,2.30e-09,56;UBERON:0001456,2.89e-09,22;UBERON:0007625,3.09e-09,11;UBERON:0000019,5.11e-09,20;UBERON:0000047,5.11e-09,20;UBERON:0010312,5.11e-09,20;UBERON:0004088,5.11e-09,20;UBERON:0010230,5.11e-09,20;UBERON:0003072,5.11e-09,20;UBERON:0004128,5.11e-09,20;UBERON:0003071,5.11e-09,20;UBERON:0000020,1.24e-08,24;UBERON:0001032,1.24e-08,24;UBERON:0004456,1.24e-08,24;UBERON:0000153,3.38e-08,62;UBERON:0007811,3.38e-08,62;UBERON:0003914,3.38e-07,117;UBERON:0003102,4.09e-07,99;UBERON:0000490,4.46e-07,148;UBERON:0005085,4.47e-07,31;UBERON:0001801,5.12e-07,14 | |||
|phase1_expression=2.36181893051724,0.642301571672949,6.90676580070259,2.00146596706261,4.46961094427288,0.872338524100369,0,0,0,0,0,0,0,7.79728023648294,3.97676850873499,2.01697543935533,1.80808358407193,2.92124036154949,1.95173119516203,0.123121058076788,0,0.626909442956176,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0.863077176966451,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.818718450173537,0,0.306083892370903,0,0,0.659702600373432,0,0,1.7412554317715,2.8369261234557,1.24564449799115,0.75374599577023,0.521482918420201,0.65156653411535,2.42159801053347,1.47311054395026,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.17366355134002,0,0,0.434539556882471,0.795285947051099,0,9.92615580222713,6.87361132133948,7.99296549807447,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,1.73570250803797,7.91431118693613,2.51699661725944,0.275118041940067,0,0.516833518338658,1.42306505074684,1.33888245105868,0,0,0,0.735326160691737,0,2.85759130509055,2.46982309888787,1.0135033243499,1.53316637465883,1.89853131913626,2.19842092716489,0,0,0,1.49091585508596,1.64619665163954,3.70745706277013,2.86836620748814,0.354668382198357,2.80338800071154,8.5399196583764,1.97334038733728,3.11211035399766,3.3677668017422,2.12500474047496,0,0,5.85803579584492,1.87296046098192,1.71141546463335,0.896692083310806,0.939475989150119,0,0.561803226808994,8.77862936396041,8.10706494257669,5.88956952701863,10.6920257155385,5.43987244412825,0,0,5.72342787443825,6.13080747372624,9.97430815743058,5.70670907145089,3.98434134538726,4.5071417671979,1.47461838108027,3.58779271377724,3.63047560991565,0.423863802319124,0.300091096084402,0.412210116953756,3.09168648054755,4.65292140828975,0.168776332241266,0.584622030967192,1.26216887122057,1.10459878370759,4.52608959092673,5.32514388774922,4.93685281315437,8.30846902321389,0.193260853163297,0,0,0.121973706129595,0,0.348581828608555,0.725627385107593,1.00928340350251,0,0,12.8648187638577,0,5.10804720835177,12.9938306700525,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,10.2940686179115,0,0,0,0.0925884451585296,2.93227474779292,3.11980435583874,4.3299402607582,1.15930404975077,12.9149563659404,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,8.37527504423104,0,0,0,0,0.126995788584338,0,0,0,0.616964956219941,0,0,0.897048674762886,0,1.6134422880609,2.71470603091333,0,0,13.2969058292435,4.16029747645464,0,0,0.799266537048298,2.57360388584666,0,0,0,1.77695974371273,0,0,0.871533458600294,1.19967589418468,0,0,0,5.5113716763064,1.14861935834114,4.27910715122155,0.289562613335158,3.28762116080613,0,0,0,0.215627574859517,0,4.31960861178188,3.90419561572865,0,0.167516265334349,0,0,0,0,4.53958519360818,3.00102312635806,0.813795071099207,1.45579603071565,12.4900292158013,9.61984731707001,0.35142424497814,1.80567659836631,2.27407504055985,2.0694614258501,9.29915837949611,6.0841825618762,14.0751455438294,0.783204629850962,0,0,0,0,0,0,0.604780586659361,6.69891081110698,0.460385919864187,1.40330047216537,10.6355493882232,1.53512174720011,9.65123526861645,0,10.1778397909753,10.1210183428482,14.7007609264718,2.59627214591811,12.3183001167557,0,0.200506470303285,0,6.54442354538258,9.10455840033585,14.4236856455367,1.35359883872224,7.00839567650174,0,0,3.9054102690364,0,1.02056223165909,4.96606607034921,0,6.23176806350862,0.501689773854853,0,0,0.895499018888713,0.219259876645935,0.522870902049801,15.6434576320997,8.85639543389205,40.6722993330379,0.824328093181778,0,0,0,0,0,11.7938276316389,2.15668063960502,1.07452572308291,0.413509717453592,2.36324538710202,0.725083469571143,0.511359764496605,9.70449188549437,0,0,0,0,0.929691098594572,10.0739950985805,0.6970372701606,0,0.532306030317022,3.47973196830029,0.18532421910392,0.715624433709956,0.744316738719335,0.632758849437452,1.14378116354295,4.86205803491534,0.42793898803392,1.90921948755562,0.78494864019923,2.69808686374972,0.274537029736055,1.06031162111118,1.01091240786658,1.58510321173008,0,0.975267478179181,2.43713489631284,0,3.41249778519964,12.5850834438804,0,7.71911480964574,2.65375590096488,0.438450885253763,9.260408548267,12.462000288886,0.811641507850816,1.239293992399,2.53526042279017,0.143411352204052,0.687743287091848,0.35667105148125,1.06428319221179,0.844430541190656,0,3.03578539012572,2.79947776195986,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,130.859487131155,0,0.245040215981032,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,2.22617410045812,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0.409074730008619,0,0.311039587661807,0,10.2042069565097,0,0.295930216910801,0,8.89095921157095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,3.07643550786903,0,0,0,0,5.22106282390615,0,0,0,0,0.2255956606171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| 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| ||
|short_description=p3@F2RL2 | |||
}} | }} |
Latest revision as of 18:29, 18 September 2015
Short description: | p3@F2RL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_F2RL2_5end |
Coexpression cluster: | C2828_Wilms_normal_Retinal_rhabdomyosarcoma_Hair_liposarcoma_glioblastoma |
Association with transcript: | 46bp_to_ENST00000504899, uc011csw.1_5end |
EntrezGene: | F2RL2 |
HGNC: | 3539 |
UniProt: | B4DQ13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.73e-18 | 76 |
multi fate stem cell | 2.59e-09 | 427 |
somatic stem cell | 1.03e-08 | 433 |
stem cell | 3.17e-08 | 441 |
preadipocyte | 1.44e-07 | 12 |
cardiocyte | 1.51e-07 | 16 |
muscle cell | 3.64e-07 | 55 |
muscle precursor cell | 4.64e-07 | 58 |
myoblast | 4.64e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.64e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
subdivision of head | 2.73e-11 | 49 |
eye | 2.20e-09 | 21 |
visual system | 2.20e-09 | 21 |
head | 2.30e-09 | 56 |
face | 2.89e-09 | 22 |
pigment epithelium of eye | 3.09e-09 | 11 |
camera-type eye | 5.11e-09 | 20 |
simple eye | 5.11e-09 | 20 |
immature eye | 5.11e-09 | 20 |
ocular region | 5.11e-09 | 20 |
eyeball of camera-type eye | 5.11e-09 | 20 |
optic cup | 5.11e-09 | 20 |
optic vesicle | 5.11e-09 | 20 |
eye primordium | 5.11e-09 | 20 |
sense organ | 1.24e-08 | 24 |
sensory system | 1.24e-08 | 24 |
entire sense organ system | 1.24e-08 | 24 |
anterior region of body | 3.38e-08 | 62 |
craniocervical region | 3.38e-08 | 62 |
epithelial tube | 3.38e-07 | 117 |
surface structure | 4.09e-07 | 99 |
unilaminar epithelium | 4.46e-07 | 148 |
ectodermal placode | 4.47e-07 | 31 |
anterior segment of eyeball | 5.12e-07 | 14 |