FFCP PHASE1:Hg19::chr19:46003039..46003051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147699 | |EntrezGene=147699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26845 | |HGNC=26845 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCQ2 | |UniProt=B5MCQ2 | ||
|association_with_transcript=-155bp_to_ENST00000401593_5end | |association_with_transcript=-155bp_to_ENST00000401593_5end | ||
|cluster_id=chr19:46003039..46003051,+ | |||
|coexpression_cluster_id=C157 | |coexpression_cluster_id=C157 | ||
|description=CAGE_peak_6_at_PPM1N_5end | |description=CAGE_peak_6_at_PPM1N_5end | ||
|id=chr19:46003039..46003051,+ | |id=chr19:46003039..46003051,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.73e-44!7;CL:0000586!6.73e-44!7;CL:0002322!7.55e-42!5;CL:0000540!3.50e-13!6;CL:0000031!3.50e-13!6;CL:0000404!3.50e-13!6;CL:0000047!5.10e-10!8;CL:0000083!2.79e-09!4;CL:0000148!4.22e-08!10;CL:0000541!4.22e-08!10 | |ontology_enrichment_celltype=CL:0000039!6.73e-44!7;CL:0000586!6.73e-44!7;CL:0002322!7.55e-42!5;CL:0000540!3.50e-13!6;CL:0000031!3.50e-13!6;CL:0000404!3.50e-13!6;CL:0000047!5.10e-10!8;CL:0000083!2.79e-09!4;CL:0000148!4.22e-08!10;CL:0000541!4.22e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.26e-88;7!CL:0000586;3.26e-88;7!CL:0002322;1.34e-20;5!CL:0002321;1.59e-07;15!CL:0000083;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.27e-88,7;CL:0000586,4.27e-88,7;CL:0002322,1.10e-20,5;CL:0000083,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.51e-40;10!UBERON:0005564;3.51e-40;10 | |||
|ontology_enrichment_disease=DOID:3095!1.08e-13!22;DOID:2994!1.08e-13!22;DOID:1799!6.31e-10!1;DOID:10165!6.31e-10!1;DOID:1798!6.31e-10!1;DOID:1793!2.79e-09!4 | |ontology_enrichment_disease=DOID:3095!1.08e-13!22;DOID:2994!1.08e-13!22;DOID:1799!6.31e-10!1;DOID:10165!6.31e-10!1;DOID:1798!6.31e-10!1;DOID:1793!2.79e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.91e-28;22!DOID:2994;1.91e-28;22!DOID:1799;8.64e-26;1!DOID:10165;8.64e-26;1!DOID:1798;8.64e-26;1!DOID:1793;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.08e-28,22;DOID:2994,2.08e-28,22;DOID:1799,9.79e-26,1;DOID:10165,9.79e-26,1;DOID:1798,9.79e-26,1;DOID:1793,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.84e-27!8;UBERON:0003135!2.00e-19!11;UBERON:0002323!1.80e-13!46;UBERON:0004458!1.44e-12!49;UBERON:0000991!4.19e-10!21;UBERON:0009196!4.19e-10!21;UBERON:0009117!4.19e-10!21;UBERON:0005564!4.19e-10!21;UBERON:0004176!1.23e-09!22;UBERON:0003101!1.23e-09!22;UBERON:0000079!1.23e-09!22;UBERON:0003886!1.75e-09!63;UBERON:0002553!2.11e-08!70;UBERON:0003133!6.64e-08!48;UBERON:0002075!1.77e-07!18 | |ontology_enrichment_uberon=UBERON:0000473!9.84e-27!8;UBERON:0003135!2.00e-19!11;UBERON:0002323!1.80e-13!46;UBERON:0004458!1.44e-12!49;UBERON:0000991!4.19e-10!21;UBERON:0009196!4.19e-10!21;UBERON:0009117!4.19e-10!21;UBERON:0005564!4.19e-10!21;UBERON:0004176!1.23e-09!22;UBERON:0003101!1.23e-09!22;UBERON:0000079!1.23e-09!22;UBERON:0003886!1.75e-09!63;UBERON:0002553!2.11e-08!70;UBERON:0003133!6.64e-08!48;UBERON:0002075!1.77e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.86e-50;8!UBERON:0003135;1.36e-36;11!UBERON:0000991;1.83e-19;21!UBERON:0003101;1.33e-18;22!UBERON:0000079;1.33e-18;22!UBERON:0000922;5.05e-13;49!UBERON:0002323;7.11e-13;45!UBERON:0002553;2.44e-08;52!UBERON:0004458;4.42e-08;48!UBERON:0003133;2.55e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.86e-50,8;UBERON:0003135,1.36e-36,11;UBERON:0000991,1.83e-19,21;UBERON:0009196,1.83e-19,21;UBERON:0009117,1.83e-19,21;UBERON:0005564,1.83e-19,21;UBERON:0004176,1.33e-18,22;UBERON:0003101,1.33e-18,22;UBERON:0000079,1.33e-18,22;UBERON:0002323,8.74e-14,46;UBERON:0004458,5.87e-13,49;UBERON:0003886,8.79e-12,54;UBERON:0002553,1.86e-10,61;UBERON:0003133,9.00e-09,48;UBERON:0005156,3.33e-07,59;UBERON:0000990,3.33e-07,59 | |||
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|short_description=p6@PPM1N | |short_description=p6@PPM1N | ||
}} | }} |
Latest revision as of 18:24, 18 September 2015
Short description: | p6@PPM1N |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PPM1N_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | -155bp_to_ENST00000401593_5end |
EntrezGene: | PPM1N |
HGNC: | 26845 |
UniProt: | B5MCQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.27e-88 | 7 |
germ cell | 4.27e-88 | 7 |
embryonic stem cell | 1.10e-20 | 5 |
epithelial cell of pancreas | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 4.86e-50 | 8 |
male reproductive organ | 1.36e-36 | 11 |
gonad | 1.83e-19 | 21 |
indifferent external genitalia | 1.83e-19 | 21 |
indifferent gonad | 1.83e-19 | 21 |
gonad primordium | 1.83e-19 | 21 |
external genitalia | 1.33e-18 | 22 |
male organism | 1.33e-18 | 22 |
male reproductive system | 1.33e-18 | 22 |
body cavity | 8.74e-14 | 46 |
body cavity or lining | 5.87e-13 | 49 |
body cavity precursor | 8.79e-12 | 54 |
anatomical cavity | 1.86e-10 | 61 |
reproductive organ | 9.00e-09 | 48 |
reproductive structure | 3.33e-07 | 59 |
reproductive system | 3.33e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.08e-28 | 22 |
germ cell cancer | 2.08e-28 | 22 |
islet cell tumor | 9.79e-26 | 1 |
endocrine pancreas cancer | 9.79e-26 | 1 |
pancreatic endocrine carcinoma | 9.79e-26 | 1 |
pancreatic cancer | 1.92e-07 | 4 |