FFCP PHASE1:Hg19::chr19:46000221..46000235,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10468 | |||
|TSSclassifier=strong | |||
|UniProt=O75298 | |||
|association_with_transcript=75bp_to_ENST00000245923,NM_005619_5end | |||
|cluster_id=chr19:46000221..46000235,- | |||
|description=CAGE_peak_5_at_RTN2_5end | |||
|id=chr19:46000221..46000235,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;4.68e-07;1!CL:0000164;4.68e-07;1!CL:0000502;4.68e-07;1!CL:0000172;4.68e-07;1!CL:0000173;4.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.14e-07,1;CL:0000164,5.14e-07,1;CL:0000502,5.14e-07,1;CL:0000172,5.14e-07,1;CL:0000173,5.14e-07,1;CL:0002351,5.14e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.38e-08;3!CL:0002351;4.68e-07;1!UBERON:0006601;7.53e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;4.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.50e-24!82;UBERON:0000073!1.60e-23!94;UBERON:0001016!1.60e-23!94;UBERON:0001049!3.04e-23!57;UBERON:0005068!3.04e-23!57;UBERON:0006241!3.04e-23!57;UBERON:0007135!3.04e-23!57;UBERON:0005743!9.76e-23!86;UBERON:0000955!7.57e-20!69;UBERON:0006238!7.57e-20!69;UBERON:0002616!2.46e-19!59;UBERON:0003075!2.57e-17!86;UBERON:0007284!2.57e-17!86;UBERON:0002780!1.24e-16!41;UBERON:0001890!1.24e-16!41;UBERON:0006240!1.24e-16!41;UBERON:0002346!1.66e-16!90;UBERON:0003080!5.87e-16!42;UBERON:0001893!6.44e-16!34;UBERON:0002020!6.84e-16!34;UBERON:0003528!6.84e-16!34;UBERON:0001869!4.30e-15!32;UBERON:0002791!5.26e-15!33;UBERON:0004121!1.44e-14!169;UBERON:0000924!3.32e-14!173;UBERON:0006601!3.32e-14!173;UBERON:0001950!2.51e-12!20;UBERON:0002619!3.15e-12!22;UBERON:0003056!1.25e-11!61;UBERON:0000033!2.33e-11!123;UBERON:0000956!5.80e-11!25;UBERON:0000203!5.80e-11!25;UBERON:0000153!5.38e-10!129;UBERON:0007811!5.38e-10!129;UBERON:0003076!1.27e-08!15;UBERON:0003057!1.27e-08!15;UBERON:0000025!2.11e-08!194;UBERON:0000119!2.26e-08!312;UBERON:0000483!3.54e-08!309;UBERON:0007023!7.07e-07!115;UBERON:0004733!9.79e-07!12;UBERON:0002028!9.79e-07!12;UBERON:0007277!9.79e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.00e-43;20!UBERON:0001869;7.37e-42;32!UBERON:0002619;1.07e-39;22!UBERON:0001893;1.35e-38;34!UBERON:0002791;2.21e-36;32!UBERON:0000956;8.17e-35;25!UBERON:0000203;8.17e-35;25!UBERON:0003528;8.43e-35;34!UBERON:0002020;8.43e-35;34!UBERON:0002780;1.21e-27;41!UBERON:0001890;1.21e-27;41!UBERON:0000073;1.79e-24;53!UBERON:0002616;1.79e-24;53!UBERON:0001872;1.52e-18;5!UBERON:0001017;4.00e-18;75!UBERON:0000955;5.17e-17;68!UBERON:0000369;1.75e-13;4!UBERON:0002435;1.75e-13;4!UBERON:0000204;1.75e-13;4!UBERON:0001016;1.45e-12;83!UBERON:0002021;2.13e-11;5!UBERON:0002420;2.25e-10;9!UBERON:0007245;2.25e-10;9!UBERON:0010009;2.25e-10;9!UBERON:0010011;2.25e-10;9!UBERON:0000454;2.25e-10;9!UBERON:0000200;2.31e-09;6!UBERON:0001870;1.38e-08;3!UBERON:0005383;1.38e-08;3!UBERON:0005382;1.38e-08;3!UBERON:0001871;6.55e-08;6!UBERON:0009663;6.55e-08;7!UBERON:0002902;1.69e-07;1!UBERON:0009899;1.69e-07;1!UBERON:0007190;1.69e-07;1!UBERON:0002581;4.68e-07;1!UBERON:0001882;4.68e-07;1!UBERON:0002022;4.68e-07;1!UBERON:0001874;4.68e-07;1!UBERON:0003112;4.68e-07;1!UBERON:0007195;4.68e-07;1!UBERON:0011158;4.68e-07;1!UBERON:0003128;4.68e-07;1!UBERON:0005403;4.68e-07;1!UBERON:0001703;4.68e-07;1!UBERON:0002241;4.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.76e-47,32;UBERON:0001893,2.24e-44,34;UBERON:0001950,5.57e-44,20;UBERON:0000073,1.22e-42,53;UBERON:0002616,1.22e-42,53;UBERON:0002791,1.47e-41,32;UBERON:0002780,8.70e-41,41;UBERON:0001890,8.70e-41,41;UBERON:0003080,8.70e-41,41;UBERON:0006240,8.70e-41,41;UBERON:0001049,3.67e-40,56;UBERON:0005068,3.67e-40,56;UBERON:0006241,3.67e-40,56;UBERON:0007135,3.67e-40,56;UBERON:0002619,6.27e-40,22;UBERON:0003528,5.44e-39,34;UBERON:0002020,5.44e-39,34;UBERON:0000955,2.34e-35,68;UBERON:0006238,2.34e-35,68;UBERON:0001017,3.85e-35,81;UBERON:0000956,5.10e-35,25;UBERON:0000203,5.10e-35,25;UBERON:0001016,3.26e-31,89;UBERON:0003056,2.20e-26,61;UBERON:0003075,3.53e-26,82;UBERON:0007284,3.53e-26,82;UBERON:0002346,9.07e-25,86;UBERON:0010371,3.79e-24,104;UBERON:0001872,8.08e-19,5;UBERON:0010314,4.07e-18,132;UBERON:0004121,4.18e-17,171;UBERON:0000924,4.18e-17,171;UBERON:0006601,4.18e-17,171;UBERON:0007023,7.25e-16,114;UBERON:0000369,9.05e-14,4;UBERON:0002435,9.05e-14,4;UBERON:0000204,9.05e-14,4;UBERON:0010082,9.05e-14,4;UBERON:0011216,6.06e-12,223;UBERON:0002021,2.69e-11,5;UBERON:0000025,6.06e-11,192;UBERON:0002420,1.28e-10,9;UBERON:0007245,1.28e-10,9;UBERON:0010009,1.28e-10,9;UBERON:0010011,1.28e-10,9;UBERON:0000454,1.28e-10,9;UBERON:0000200,2.04e-09,6;UBERON:0005383,6.92e-09,3;UBERON:0005382,6.92e-09,3;UBERON:0001870,1.06e-08,3;UBERON:0009663,4.54e-08,7;UBERON:0001871,4.88e-08,6;UBERON:0004111,8.11e-08,240;UBERON:0007190,1.65e-07,1;UBERON:0002902,1.75e-07,1;UBERON:0009899,1.75e-07,1;UBERON:0001874,2.10e-07,1;UBERON:0003112,4.57e-07,1;UBERON:0011158,4.57e-07,1;UBERON:0003128,4.57e-07,1;UBERON:0001703,4.57e-07,1;UBERON:0002241,4.57e-07,1;UBERON:0004761,4.57e-07,1;UBERON:0009617,4.57e-07,1;UBERON:0001882,5.45e-07,1;UBERON:0005403,5.45e-07,1;UBERON:0002581,6.88e-07,1;UBERON:0002022,8.18e-07,1;UBERON:0007195,9.18e-07,1 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0,0.0764134057479513,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0.354668382198357,1.68203280042692,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0.340296549480063,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.302256294682921,0.169560592310488,0,0,0.573609190778008,0.609868530647977,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0,0.329250856225877,1.1240175325762,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0,0,0,0,0,0,0,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0.828831026872071,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.601519410909855,0.0920809889358963,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0.178064071293475,0,0,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0.92947049429925,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0.111308705022906,0,0,0,0,0.503865495708552,0.102268682502155,0,0.311039587661807,0,0,0,0,0,1.11136990144637,2.90799823828566,0.834912883456661,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0.347249989866585,0,1.5677537021303,0,1.76926815889959,1.18219047581419,1.09692698576986,0,0.139423744278603,0,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0,0.269604531922708,0,0.937057782901357,0,0,0.485560759068186,0,0,1.53036380815245,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.353024506766001,0,0,0,1.32952671507345,0,0,0,0.19980960958213,0,0,0.343189995723929,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0.681017030557878,0,0.137539436597234,0,0.2249738915515,0.77380195455795,1.15424157650247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.387848869084652,0.66116300871345,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,1.752673029891,0,0.443716206147409,0.558867626472451,0,0.249960815924213,0.151649117541648,0,0.235265819698172,0.936669811613763,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0.260994291965212,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0.895260599125562,0.862598491173454,0.157265941855896,0.764467467344097,0,0.212574920101683,0,0,0,0,0,0,0,1.41304295212211,0,1.27707087245721,0.205116364240755,2.01657356977374,2.07471757392654,1.45328081068666,0,0.196295437002051,0,0,0.115525666150338,0,0,0.596748666348824,0,0,0,0.261906694481422,0.163771917510097,0,2.22874029240702,1.56215619722769,1.8601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| |||
|short_description=p5@RTN2 | |||
}} |
Latest revision as of 18:16, 18 September 2015
Short description: | p5@RTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RTN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 75bp_to_ENST00000245923, NM_005619_5end |
EntrezGene: | RTN2 |
HGNC: | 10468 |
UniProt: | O75298 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.14e-07 | 1 |
enteroendocrine cell | 5.14e-07 | 1 |
type D enteroendocrine cell | 5.14e-07 | 1 |
somatostatin secreting cell | 5.14e-07 | 1 |
pancreatic D cell | 5.14e-07 | 1 |
progenitor cell of endocrine pancreas | 5.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.14e-07 | 1 |