FFCP PHASE1:Hg19::chr15:67547163..67547193,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64799 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25721 | |||
|TSSclassifier=strong | |||
|UniProt=Q86VS3,B4E2J4 | |||
|association_with_transcript=0bp_to_ENST00000335894,ENST00000535744,ENST00000559568,uc002aqm.2,uc002aqn.1,uc002aqo.1,uc002aqp.1,uc002aqq.1,uc010ujv.1_5end | |||
|cluster_id=chr15:67547163..67547193,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_IQCH_5end | |||
|id=chr15:67547163..67547193,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.40e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.21e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.25e-17!235;DOID:14566!5.55e-16!239;DOID:305!1.10e-15!106;DOID:0050687!3.14e-14!143;DOID:0050686!1.84e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.73e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.16e-17,106;DOID:0050687,2.83e-16,143;DOID:162,3.66e-16,235;DOID:14566,2.86e-15,239;DOID:0050686,1.37e-07,137;DOID:1749,5.72e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.61e-08!86;UBERON:0004121!2.75e-08!169;UBERON:0000073!3.45e-08!94;UBERON:0001016!3.45e-08!94;UBERON:0001017!4.49e-08!82;UBERON:0000924!5.66e-08!173;UBERON:0006601!5.66e-08!173;UBERON:0003075!3.44e-07!86;UBERON:0007284!3.44e-07!86;UBERON:0000153!3.91e-07!129;UBERON:0007811!3.91e-07!129;UBERON:0000955!4.17e-07!69;UBERON:0006238!4.17e-07!69;UBERON:0000033!8.55e-07!123;UBERON:0002346!9.81e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0.495065411840187,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0.861847406537515,0.204000691244253,0,1.14494394852423,0.273748850145768,0.376627918784408,0.229240217243854,0.410502947249729,0.472264687882075,0.786728553697808,0,0.464448369948228,0.919421224478927,0,0.369754010166788,2.63388481973026,2.84338464974843,0,1.10799081706375,1.20326668482085,1.08505435357926,0,0,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0.918251677112708,0.320929027076094,0,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,2.64342657158052,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0.434539556882471,1.5905718941022,1.45990461090791,0.850813354476611,0.221729397462564,0.527008714158756,8.97206667159332,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,1.72131935057184,1.14734648299525,0.709336764396714,0.560677600142307,2.1349799145941,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0,0,0.448346041655403,1.05691048779388,0.323745888736263,0.421352420106746,0.408308342509787,0.491337269247072,0.516628905878827,0,0.741800787835671,0,0,1.0100166837244,0.125118519871964,0.831192346452549,0.877955241761676,0,0.300476117813194,0.567160915800105,0.89694817844431,0.85422955527427,0.423863802319124,0.600182192168805,0.824420233907511,0.515281080091258,0.558350568994769,0.843881661206331,0.584622030967192,1.7670364197088,0.736399189138395,0.80823028409406,0.355009592516614,0.201504196455281,0,0.193260853163297,0.272746120590835,0.573609190778008,1.09776335516636,0.265059536642971,1.2781333715647,1.0366105501537,0,0.72995471815166,1.56449532329816,0,0,0.928735856063958,0,0.236613600079688,0.337169380156203,0,0.772057809126758,0.653638332277218,0.949082476444386,0.269662616320329,0.392442930250692,1.15424147083917,0,0,0,0,0,0,0.590789906681404,1.7658523976586,0.245976877086227,0.686271241194102,1.31700342490351,1.1240175325762,1.20634766893957,1.11106134190236,0.325808305310325,0,0,1.15930404975077,1.29149563659404,0.288732895522148,0.925971025153221,0.570762456703795,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,0.671928512795438,0.992425680696705,1.52249488594842,0,0,0.492663237895943,0.352193736052904,0.414656231081544,0.144119953416961,0.25248486685276,0.507983154337352,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0.285826432630578,0.672786506072164,0.87192013766656,0.4400297149257,0.129271715757778,0,0,0,0,0,0,0.799266537048298,0.428933980974443,0,1.64648067356154,0.325736184293735,0.355391948742546,0,1.20575750823834,0,0.599837947092342,0,0,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.895304816199478,1.00876629594175,0.197030760201927,0.431255149719035,0.513372145118994,0.76228387266739,1.30139853857622,0.773288812777695,0,1.91381625495949,0.749007023947182,0,0,0.36807447515742,0,0,0.623912584592421,0.535286966391485,0.473107245101804,0,1.20378439891088,2.27407504055985,0,0,0,1.47702144595741,0.783204629850962,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0.303127571446259,0,0.604780586659361,0.496215615637554,0.153461973288062,0.561320188866147,0.640695746278505,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0.581051892299796,0.120859449591622,0.802025881213139,0.276242966807689,0.229628896329213,0.546273504020151,0.524497659837696,0,0.924184045252977,0,1.46139224653261,0.633309773357254,0,0,1.51141141271498,0,0.541892875087706,0,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0.512900250232778,0.328014645699706,0.650756789328606,1.03041011647722,1.92295876118521,2.0627374980147,0.574265537996172,0.650060246036521,0,0.48335359146061,0.616194468458578,0.15350367472613,0.275673144969061,1.07420244868274,1.16013355131383,1.19317278382541,1.15741646340759,0.826424576804891,0.384380134730212,1.78657797492418,0.50578890427775,0.464845549297286,0.31481234683064,0,0.308033580176089,0.532306030317022,0.869932992075073,0.55597265731176,0.286249773483982,0.372158369359667,0.316379424718726,0.762520775695299,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0.471249609382746,0,1.58510321173008,0.842516912477962,0.975267478179181,0.243713489631284,0,0.545999645631943,0.989838023675989,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0.655894752046633,0.405820753925408,0,0.563391205064483,0.286822704408103,0.196498082026242,0.35667105148125,0,0.633322905892992,0.329294892959902,0.379473173765715,1.04980416073495,0.673554789078584,0.670302275535787,0,1.03558180854457,0,0,1.33029046061003,1.83778720165568,0,0,0,0,0,0,0,0,0.961416640147258,0,0.490080431962063,0.371606350251437,0.28853842595289,0.853702120180969,0.797131363644112,0.199579371432817,0.5745161103971,0.211673582723883,0.324621940274555,0.280797178113459,0,0.47003968731907,0,1.01575066680962,0.1605880751037,0.201799707191048,0.851692475380653,0,0.307240764308458,0.223676107892416,0.500547425135725,0.781552381608161,1.11362469558097,0,0.270455678475983,0,1.4098700508785,1.8714054040822,0.293016358543788,0.606802608747567,0.780103689942349,0.284136146806413,0.71623345421307,0.296964680832639,1.53580351049616,0,0.844016498463076,1.22439575525196,0.494411622680279,2.11125408127993,0.597743964753209,0.276283915531148,1.25966373927138,0.102268682502155,0.123084805461069,0.622079175323615,0.359473404589307,0.895105873378046,0.511572370226872,0.591860433821602,0,0,1.93866549219044,0.927680981618513,0,0.260427761085233,1.74919999992391,0.724999575434793,1.0241410345695,1.5255219017566,2.36387681767936,6.89486746482929,0.874813840149763,1.38899995946634,3.54296554325536,1.4471572635049,0,0.221158519862449,0.591095237907095,0.87754158861589,0.980446171670911,2.50962739701486,0.692552326534174,0.113942055847001,0.46112780877612,0.628303510868405,0.434589487688032,0,0.457987967009312,0,2.04386596391473,0,0.166211681900156,1.80476528493745,0.784250137270958,1.00692952185506,0.948768663620925,0.953619473882272,1.26598838716816,3.91758739581955,0.141353071433941,0.649165919226273,0.995261931078505,0.353830258013357,0.611030144933625,1.48260564340311,0.370691816839509,0.730953646538188,1.81983059047828,0,0.937057782901357,0.91227394607833,0.978323094660449,3.64170569301139,2.76209081994573,0,0.91821828489147,0.758238955541855,3.90840890477681,0.207376382794494,0.664653872707185,0.330991955875499,1.2557316736289,1.19472429772959,0.853828638089378,0.416024019039416,1.21491816834592,2.74378712760257,2.96001302373369,4.54289337429278,0.687944129886466,1.06431964417994,1.31560770755134,1.47807822695777,0.387956065953678,0.176512253383001,1.12990370390266,1.09633539717401,1.58971689362392,1.89932387867636,2.15106521008283,3.52698809106748,1.06726497369676,2.19790570540343,1.72908500584927,0.916292769327325,2.57392496792947,1.87271237384595,0.99402028452346,4.71388069233591,0.67952103036807,1.04602846312333,1.4279750469085,2.02265412931063,0.600420288709789,0.273810757783986,0,2.57859264851974,0.788662062837943,0.279282401272254,0.458320848023367,0.717873024576814,0.599037001496973,0,0.669514372325618,0.403100834920358,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,1.37798474120648,2.62487329403932,0.795229689809303,0.953423842781029,0.964518890790115,1.37539436597234,0,0,0,1.70098758642469,3.35434687599266,2.04894838977915,2.7276385830199,0.211200673038813,0.179287339332845,2.68681276247223,0,0.662091970365432,0,0,0,0,2.39460383124975,0.492555124496034,0.851940108927109,1.13312091520126,0.146552233678082,0,1.42211251997706,1.3223260174269,0.513260513652988,1.40963004463334,2.34932307648928,4.55892484789031,0.828478110694391,0.496166021811951,0.395223263795889,0.365377795142688,2.55336503108073,0,0.2506898940227,0,0,2.98402782875445,0.886068179966986,1.46431517882356,1.1267183763585,4.0138643698305,1.10929051536852,1.42821726765182,2.76697269872462,0.37494122388632,0,2.28372266835974,0.470531639396343,3.74667924645505,2.3187364577732,0.149254802886874,0.233713309847224,0.554805861502613,0.947015026375446,0.754703705257725,0.889811221596536,0.228840068396924,0.453692771289717,1.86524640699337,0.443565449968902,0,0.899606224327209,0.310525913752519,0,1.06336685823198,0.521745061811734,0.901545653983311,0.380805212168795,0,0.363697318405119,0.859284456339908,0.928067519756987,0.398095888698616,0.800055529326307,0,0.673498977531838,1.26184898228651,1.15571898244382,4.07439023612359,0,0,0,1.46842022703881,1.4327107286519,0,1.09642024789354,0.176689145945881,2.31496845925098,0.675769762612291,1.28120759293973,0.345430341731199,1.51929978088691,1.10606748921385,0,0,0.163565394255844,1.31043939538565,0.491545817507439,0,0.79994958341972,0,1.03328987796489,0,1.84105950251841,0.279759015438889,1.24415452006595,3.4531480251986,1.07824811396682,1.10086159299127,0.327628914576042,0.33946505990805,0,0.867550349813015,0,0.318004350653419,0.552032215008773,1.60114149657094,0.352675943690684,0,2.24802287837608,0,0.638535436228605,0.615349092722265,1.51243017733031,0.207471757392654,1.29180516505481,0,2.55184068102667,0.825788063434183,0.366857197043358,0.808679663052368,1.1441462864015,0,0.397832444232549,1.95546853708069,1.21023041222112,0,0.261906694481422,1.63771917510097,2.51355346568977,1.01306376927592,1.56215619722769,0,0.887821342714695,0,0,0.496211178389294,0.351742488719241,0.511049710558381,3.21421101526972,3.02655349996942,10.9253808762594,10.2447986108084,0.177404740325278,0.921871900446234,0.514464028312255,1.15548546060614,0.986591603442736,3.07303986298317,1.11231401892069,0.627944742804112,0.942693539496011,0.840816489941367,0,1.07963795609311,0,2.14429632529969,1.42212250559454,0.929931402945002,0,0,1.24329698497822,1.3657478167516,0.691259661814092,0.430227358820278,0.591660003652827,0.852134047591577,0.423387050190929,1.14553434272025,0,0.955538938977433,0.671132590786754,0.98150233615243,0.121917924982269,0,0.102662806856247,0,0.971421986118279,0,3.780064728066,1.78380136166353,1.92008339466232,0.219881033490858,0.754814217833368,0.385870790539723,0.218559560503957,6.58444214906132,0.490296643507811,1.17838273550813,0.588925401344836,0.594092800654172,1.2679671827502,0.169927114687817,0.281951753939561,0.386747327841463,1.09935271517422,1.78553938605658,1.41157948686277,4.49351653459342,0,0,0.716697915757256,0.788857810965923,0.611923411718232,0,0.5290268405154,0.371995018166751,0,0,1.51399709802095,0.764859003745869,0.633492505057185,0.305966489225945,0.26721740526556,1.65410819162721,4.26202816797038,13.8675017739378,17.1497043299954,0.829169439458779,1.03432995861895,1.49263787330687,2.85677317756488,0.322944549180031,0.558672428662721,1.23345048838675,3.30965223046457,1.21270313374932,0.435433495793923,0,0.336760265072938,6.59844289612622,0.665320713092027,1.30245229777559,1.17400080465487,0,0.538951212639521,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0.320568492303233 | |||
|short_description=p1@IQCH | |||
}} |
Latest revision as of 17:42, 18 September 2015
Short description: | p1@IQCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IQCH_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000335894, ENST00000535744, ENST00000559568, uc002aqm.2, uc002aqn.1, uc002aqo.1, uc002aqp.1, uc002aqq.1, uc010ujv.1_5end |
EntrezGene: | IQCH |
HGNC: | 25721 |
UniProt: | Q86VS3B4E2J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.21e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.16e-17 | 106 |
cell type cancer | 2.83e-16 | 143 |
cancer | 3.66e-16 | 235 |
disease of cellular proliferation | 2.86e-15 | 239 |
organ system cancer | 1.37e-07 | 137 |
squamous cell carcinoma | 5.72e-07 | 14 |