FFCP PHASE1:Hg19::chr1:60139352..60139361,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55277 | |EntrezGene=55277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25610 | |HGNC=25610 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471169_5end | |association_with_transcript=0bp_to_ENST00000471169_5end | ||
|cluster_id=chr1:60139352..60139361,+ | |||
|description=CAGE_peak_11_at_FGGY_5end | |description=CAGE_peak_11_at_FGGY_5end | ||
|id=chr1:60139352..60139361,+ | |id=chr1:60139352..60139361,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.59e-08!43;CL:0002541!4.09e-08!3 | |ontology_enrichment_celltype=CL:0002076!2.59e-08!43;CL:0002541!4.09e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002097;2.72e-10;2!CL:0000349;4.05e-09;19!CL:0000174;2.79e-07;3!CL:0002328;2.79e-07;3!CL:0002541;2.79e-07;3!CL:0002577;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0002097;2.72e-10;2!CL:0000349;4.05e-09;19!CL:0000174;2.79e-07;3!CL:0002328;2.79e-07;3!CL:0002541;2.79e-07;3!CL:0002577;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.27e-10,2;CL:0000349,4.17e-09,19;CL:0002328,2.32e-07,3;CL:0002577,2.47e-07,3;CL:0000174,3.16e-07,3;CL:0002541,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;8.94e-20;1!DOID:4556;2.05e-07;3 | |ontology_enrichment_disease_v019=DOID:3112;8.94e-20;1!DOID:4556;2.05e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,8.95e-20,1;DOID:4556,2.05e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.21e-13!14;UBERON:0000158!9.21e-13!14;UBERON:0000161!1.59e-09!35;UBERON:0000166!2.99e-09!21;UBERON:0003124!9.27e-09!7;UBERON:0000476!4.09e-08!3;UBERON:0000920!4.09e-08!3;UBERON:0000165!1.05e-07!28;UBERON:0000930!1.05e-07!28;UBERON:0001723!1.89e-07!3;UBERON:0001033!1.89e-07!3;UBERON:0010056!1.89e-07!3;UBERON:0003729!2.45e-07!5;UBERON:0000062!9.53e-07!511 | |ontology_enrichment_uberon=UBERON:0005631!9.21e-13!14;UBERON:0000158!9.21e-13!14;UBERON:0000161!1.59e-09!35;UBERON:0000166!2.99e-09!21;UBERON:0003124!9.27e-09!7;UBERON:0000476!4.09e-08!3;UBERON:0000920!4.09e-08!3;UBERON:0000165!1.05e-07!28;UBERON:0000930!1.05e-07!28;UBERON:0001723!1.89e-07!3;UBERON:0001033!1.89e-07!3;UBERON:0010056!1.89e-07!3;UBERON:0003729!2.45e-07!5;UBERON:0000062!9.53e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.04e-08;10!UBERON:0000158;4.04e-08;10!UBERON:0000478;2.46e-07;24!UBERON:0002369;2.79e-07;3!UBERON:0001235;2.79e-07;3!UBERON:0004815;2.79e-07;3!UBERON:0006858;2.79e-07;3!UBERON:0002031;2.79e-07;3!UBERON:0003124;2.79e-07;3!UBERON:0000920;2.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0005631;4.04e-08;10!UBERON:0000158;4.04e-08;10!UBERON:0000478;2.46e-07;24!UBERON:0002369;2.79e-07;3!UBERON:0001235;2.79e-07;3!UBERON:0004815;2.79e-07;3!UBERON:0006858;2.79e-07;3!UBERON:0002031;2.79e-07;3!UBERON:0003124;2.79e-07;3!UBERON:0000920;2.79e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.86e-12,14;UBERON:0000158,3.86e-12,14;UBERON:0003124,3.48e-11,7;UBERON:0004815,2.32e-07,3;UBERON:0002031,2.32e-07,3;UBERON:0000478,2.51e-07,24;UBERON:0002369,3.16e-07,3;UBERON:0001235,3.16e-07,3;UBERON:0006858,3.16e-07,3;UBERON:0000920,3.35e-07,3 | |||
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| ||
|short_description=p11@FGGY | |short_description=p11@FGGY | ||
}} | }} |
Latest revision as of 17:39, 18 September 2015
Short description: | p11@FGGY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FGGY_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000471169_5end |
EntrezGene: | FGGY |
HGNC: | 25610 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.27e-10 | 2 |
extraembryonic cell | 4.17e-09 | 19 |
bronchial epithelial cell | 2.32e-07 | 3 |
placental epithelial cell | 2.47e-07 | 3 |
steroid hormone secreting cell | 3.16e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.86e-12 | 14 |
membranous layer | 3.86e-12 | 14 |
chorion | 3.48e-11 | 7 |
lower respiratory tract epithelium | 2.32e-07 | 3 |
epithelium of bronchus | 2.32e-07 | 3 |
extraembryonic structure | 2.51e-07 | 24 |
adrenal gland | 3.16e-07 | 3 |
adrenal cortex | 3.16e-07 | 3 |
adrenal/interrenal gland | 3.16e-07 | 3 |
egg chorion | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 8.95e-20 | 1 |
lung large cell carcinoma | 2.05e-07 | 3 |