FFCP PHASE1:Hg19::chr4:77069533..77069563,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17359 | |||
|TSSclassifier=strong | |||
|UniProt=E7EUM5,D6RFI8,D6RBF7,D6RB65,D6RAH0,B4DT35 | |||
|association_with_transcript=0bp_to_ENST00000342467,ENST00000458189,ENST00000502850,ENST00000512151,ENST00000513352,ENST00000514901,ENST00000514987_5end | |||
|cluster_id=chr4:77069533..77069563,- | |||
|description=CAGE_peak_1_at_NUP54_5end | |||
|id=chr4:77069533..77069563,- | |||
|ontology_enrichment_celltype=CL:0000037!4.05e-19!172;CL:0000566!4.05e-19!172;CL:0002032!6.99e-17!165;CL:0000837!6.99e-17!165;CL:0000988!1.07e-16!182;CL:0000542!8.55e-15!53;CL:0000051!8.55e-15!53;CL:0000838!1.05e-14!52;CL:0002031!5.27e-12!124;CL:0002087!9.87e-11!119;CL:0000738!1.56e-10!140;CL:0000084!3.17e-09!25;CL:0000827!3.17e-09!25;CL:0000134!1.82e-08!358;CL:0002320!2.88e-08!365;CL:0000219!1.29e-07!390;CL:0000791!1.39e-07!18;CL:0000789!1.39e-07!18;CL:0002420!1.39e-07!18;CL:0002419!1.39e-07!18;CL:0000790!1.39e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.94e-09;25!CL:0000542;5.76e-09;53!CL:0000791;1.32e-07;18!CL:0000789;1.32e-07;18!CL:0002419;1.32e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.15e-19,168;CL:0000988,1.03e-17,177;CL:0002032,2.15e-17,161;CL:0000837,2.15e-17,161;CL:0000542,8.55e-15,53;CL:0000051,8.55e-15,53;CL:0000838,1.05e-14,52;CL:0002031,1.69e-12,120;CL:0002087,3.39e-11,115;CL:0000738,6.31e-11,136;CL:0000084,3.17e-09,25;CL:0000827,3.17e-09,25;CL:0000134,9.70e-09,354;CL:0002320,1.56e-08,361;CL:0000219,7.37e-08,386;CL:0000791,1.39e-07,18;CL:0000789,1.39e-07,18;CL:0002420,1.39e-07,18;CL:0002419,1.39e-07,18;CL:0000790,1.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;5.76e-09;53!CL:0000790;1.32e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!2.92e-13!51;DOID:0060083!2.92e-13!51;DOID:1240!3.94e-12!39;DOID:8692!3.30e-10!31;DOID:162!1.15e-09!235;DOID:14566!1.67e-08!239;DOID:0050686!1.06e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.10e-10;31!DOID:1240;1.22e-09;39!DOID:2531;2.28e-08;51!DOID:0060083;2.28e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.92e-13,51;DOID:0060083,2.92e-13,51;DOID:1240,3.94e-12,39;DOID:8692,3.30e-10,31;DOID:162,1.15e-09,235;DOID:14566,1.67e-08,239;DOID:0050686,1.06e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.33e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.37e-09,371 | |||
|phase1_expression=30.340289338183,18.6267455785155,24.244157504507,23.01685862122,19.6662881548007,21.8084631025092,27.8629865985142,24.0053551902196,24.0290777943851,9.58362352355885,4.88460817580699,8.51921351307672,7.12170841216825,32.9218498873724,28.1687769368728,16.8081286612944,15.0673632005994,18.9880623500717,17.0776479576677,14.528284853061,9.58803248847989,8.77673220138646,32.3446665458094,37.2298436198245,36.5329081220876,37.1369151935043,36.0421587685262,35.6559839350967,29.1089564868189,54.5037745298042,30.653592416583,51.4875885708199,24.3976794210383,16.6389304575054,37.494125080866,37.106169679217,46.095268975571,36.5636969631039,37.3012672294464,41.4490763067277,27.3176878572708,26.5592806135563,25.4999811957845,22.5367270108325,25.695564170839,26.6842467306598,25.3347650227196,32.0710952657024,27.2541606387691,37.1123186095574,35.0940167944868,39.0195679316166,44.4721928150238,30.9832648120237,39.2736811123591,27.4833815732203,23.4699289049747,26.51737116452,32.1388086989448,42.3626315740444,34.5242047931482,25.3985501143771,31.1163305889746,25.5734850319616,27.5698776697155,32.340957807395,29.272645702792,30.4010884960659,33.3749067788929,41.9174470280875,23.6105806027014,29.8304885149927,32.5956259064111,28.0969530794883,28.7015804952809,20.7562059053292,28.1944864177703,25.3798948902146,33.9130987930839,32.2064400427611,29.4396682254653,31.7835627550463,33.4392864476513,30.5837622306794,39.1384071699964,40.9661013663847,29.2289070536289,30.4618793175876,33.713288512028,37.2080964268792,60.3365747256015,92.7834759206083,82.1887440469242,46.2599650026591,80.1527245063597,35.5568514446354,74.9464224133704,61.3096789888697,48.1107507658852,39.6231994075907,52.7994071946416,39.2961678759829,60.3962858064525,37.879555340959,33.2904675446566,36.9961603954647,34.121286834392,30.6138254144364,34.8559051460474,39.7939729140896,44.4923528635216,36.2253857168816,43.5962495696458,55.1134105864809,41.8142095219907,39.2050325733579,45.2200182450267,44.3279404672593,42.254288567257,43.3248963480772,41.0182575929544,34.2162736001415,37.4932046503654,38.9079297909432,28.7340671070395,40.0153555954388,41.8775278429734,64.5141578319144,68.1972499247944,58.9435323802992,51.199441925932,20.1210257911091,23.5267113792096,33.6138411717647,19.5521785147997,26.5069129698307,33.4020097761462,25.3050132557371,40.6499713805492,29.2682804650584,27.4922879219485,15.3900413709812,7.65020105414339,9.26961106961073,21.0955805875544,22.9851253235033,18.8800303936789,43.8822748721829,41.1836335761692,46.8036451675252,25.4415881429383,24.0865686629715,13.8856200643038,15.2633144319483,14.6824802673467,15.4066103486438,21.1084916202179,19.639673696869,22.7690408119495,29.1206933105263,15.7103433672567,13.6848979029332,11.470916704764,41.1782649987373,12.1521292182264,47.2395562622782,26.0454072246357,32.8825523011301,29.1301611185178,17.0867818722263,19.9689900884144,14.495845917967,23.2668158488995,5.66922267785295,25.8425414881566,24.9462107979222,21.9799240149943,31.2651916616207,21.9894396962981,18.5023608046961,16.0123493594557,15.7867230986982,29.8762593983776,27.8851091184254,34.3269996538263,15.8925299027178,31.6896758463999,13.3563216145264,24.6606460695953,23.3893446833224,27.1996598604278,49.9096619236001,58.1123870281592,55.4780686473882,33.2771299145476,32.0597568183714,27.4846577927536,23.7600571456411,29.6720315134268,3.64064544775211,4.31170885089743,40.2323312350218,41.2891115577482,34.6330144355229,32.484343945182,29.4228283967059,27.4935647799072,28.8117745226453,60.6336968628353,30.9658213786923,43.6579716388697,51.0154863343484,37.7172257012686,51.7857485491715,29.4064633003912,50.1265706756561,33.5183297754523,63.6133111095169,40.7781050985386,31.6826271364871,39.7610743618608,29.6211168789262,29.5035430620248,30.1486930934743,30.5475655061735,27.5332411573444,51.5948776928188,58.3130980614535,46.7099650335464,37.214318750518,54.7536246400114,75.5503133286968,42.2413737290503,22.513432836751,16.5761905622977,26.0046039697908,23.8220228950963,18.3375540061758,16.8584690078102,17.5938051814942,19.8529150918309,18.3018733037621,23.2525206728875,18.876383142423,16.8750460007798,16.9288749056412,11.0723318193697,8.41450642820675,6.173610169971,5.88034845542168,31.6887587054577,21.6221987669078,25.9947558939818,35.7585110525867,31.6080287055802,22.8185187697039,21.9500570817251,24.7283857166763,39.3068282129477,40.3685620891189,14.009757128344,14.5590869939141,21.649701303791,22.2586377552147,18.7853910777315,15.3028434626738,17.5934494779112,27.7771062262513,23.7061319387783,21.4621540523718,21.667096535691,22.4644094533668,19.4706822598234,22.4961201568265,23.0135515632438,27.3625937677806,62.1536147557767,54.3485465021109,36.0379718415299,116.761187381339,25.710142731862,34.4164671797682,39.9212270964983,37.872730027914,22.3512587908435,6.875791660049,4.68869788840188,11.9750712215894,20.5654985406647,22.2253862804499,12.0047101704843,20.4078573508557,10.0270815831654,50.6034172164555,23.0103654048844,3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| |||
|short_description=p1@NUP54 | |||
}} |
Latest revision as of 17:27, 18 September 2015
Short description: | p1@NUP54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUP54_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342467, ENST00000458189, ENST00000502850, ENST00000512151, ENST00000513352, ENST00000514901, ENST00000514987_5end |
EntrezGene: | NUP54 |
HGNC: | 17359 |
UniProt: | E7EUM5D6RFI8D6RBF7D6RB65D6RAH0B4DT35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.15e-19 | 168 |
hematopoietic cell | 1.03e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.15e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-17 | 161 |
lymphocyte | 8.55e-15 | 53 |
common lymphoid progenitor | 8.55e-15 | 53 |
lymphoid lineage restricted progenitor cell | 1.05e-14 | 52 |
hematopoietic lineage restricted progenitor cell | 1.69e-12 | 120 |
nongranular leukocyte | 3.39e-11 | 115 |
leukocyte | 6.31e-11 | 136 |
T cell | 3.17e-09 | 25 |
pro-T cell | 3.17e-09 | 25 |
mesenchymal cell | 9.70e-09 | 354 |
connective tissue cell | 1.56e-08 | 361 |
motile cell | 7.37e-08 | 386 |
mature alpha-beta T cell | 1.39e-07 | 18 |
alpha-beta T cell | 1.39e-07 | 18 |
immature T cell | 1.39e-07 | 18 |
mature T cell | 1.39e-07 | 18 |
immature alpha-beta T cell | 1.39e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.37e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.92e-13 | 51 |
immune system cancer | 2.92e-13 | 51 |
leukemia | 3.94e-12 | 39 |
myeloid leukemia | 3.30e-10 | 31 |
cancer | 1.15e-09 | 235 |
disease of cellular proliferation | 1.67e-08 | 239 |
organ system cancer | 1.06e-07 | 137 |