FFCP PHASE1:Hg19::chr1:173174520..173174532,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7292 | |EntrezGene=7292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11934 | |HGNC=11934 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV74 | |UniProt=Q8IV74 | ||
|association_with_transcript=79bp_to_ENST00000545292_5end | |association_with_transcript=79bp_to_ENST00000545292_5end | ||
|cluster_id=chr1:173174520..173174532,- | |||
|description=CAGE_peak_9_at_TNFSF4_5end | |description=CAGE_peak_9_at_TNFSF4_5end | ||
|id=chr1:173174520..173174532,- | |id=chr1:173174520..173174532,- | ||
|ontology_enrichment_celltype=CL:0000055!1.84e-10!180;CL:0002573!1.01e-08!2;CL:0002504!1.34e-08!3;CL:1000279!1.34e-08!3;CL:1000280!1.34e-08!3 | |ontology_enrichment_celltype=CL:0000055!1.84e-10!180;CL:0002573!1.01e-08!2;CL:0002504!1.34e-08!3;CL:1000279!1.34e-08!3;CL:1000280!1.34e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002195;1.42e-20;2!CL:0002571;1.42e-20;2!CL:0000134;9.75e-16;55!CL:0002573;2.77e-14;2!CL:0000048;3.34e-14;58!CL:0000723;3.07e-12;61!CL:0000511;1.18e-11;1!CL:0002625;1.18e-11;1!CL:0000216;1.18e-11;1!CL:0002568;3.63e-11;1!CL:0000034;2.21e-10;69!CL:0002537;3.53e-09;5!CL:0000349;1.10e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.42e-20,2;CL:0002571,1.42e-20,2;CL:0002573,3.17e-14,2;CL:0000511,1.18e-11,1;CL:0002625,1.18e-11,1;CL:0000216,1.18e-11,1;CL:0002568,2.18e-11,1;CL:0002537,3.83e-09,5;CL:0000349,1.12e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.72e-20!14;DOID:193!3.58e-10!29;DOID:120!2.49e-09!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.66e-25;14!DOID:120;5.93e-13;27!DOID:193;4.94e-12;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.89e-25,14;DOID:120,5.00e-13,27;DOID:193,4.21e-12,29 | |||
|ontology_enrichment_uberon=UBERON:0000992!1.49e-11!13;UBERON:0002118!6.66e-09!5;UBERON:0004532!6.66e-09!5;UBERON:0000991!2.02e-08!21;UBERON:0009196!2.02e-08!21;UBERON:0009117!2.02e-08!21;UBERON:0005564!2.02e-08!21;UBERON:0004176!5.93e-08!22;UBERON:0002066!8.52e-08!5;UBERON:0000490!9.58e-08!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.16e-18;5!UBERON:0000992;1.58e-12;13!UBERON:0000991;7.31e-12;21!UBERON:0001136;1.18e-11;1!UBERON:0001343;1.18e-11;1!UBERON:0004910;1.18e-11;1!UBERON:0004813;1.18e-11;1!UBERON:0005631;1.08e-09;10!UBERON:0000158;1.08e-09;10!UBERON:0000478;6.61e-07;24!UBERON:0000305;8.61e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,9.69e-19,5;UBERON:0000992,1.32e-12,13;UBERON:0004871,3.93e-12,8;UBERON:0000991,6.37e-12,21;UBERON:0009196,6.37e-12,21;UBERON:0009117,6.37e-12,21;UBERON:0005564,6.37e-12,21;UBERON:0001136,1.18e-11,1;UBERON:0001343,1.18e-11,1;UBERON:0004910,1.18e-11,1;UBERON:0005154,1.18e-11,1;UBERON:0005295,1.18e-11,1;UBERON:0004813,1.18e-11,1;UBERON:0005297,1.18e-11,1;UBERON:0005294,1.18e-11,1;UBERON:0010141,1.18e-11,1;UBERON:0005891,1.18e-11,1;UBERON:0004176,2.24e-11,22;UBERON:0005631,5.23e-07,14;UBERON:0000158,5.23e-07,14;UBERON:0000478,6.72e-07,24;UBERON:0000305,9.12e-07,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0.794025282120147,0,1.70845911054854,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.705264687593482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,1.93907573636667,0,0,6.64845291462176,2.08014873822732,0,0,0,1.28680194292333,0,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.34444334449382,0.910455840033585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.632758849437452,4.19386426632415,0,0,0,0,0.899362287916574,1.09814811894422,0.824686816419805,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,1.00387946542836,0.392996164052485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0.417687798021821,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.627617077873999,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0.315132729228895,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59296767163702,0,0.931577741257556,0.829412415681711,5.84851772027589,1.5652351854352,0.150257608997218,0.380805212168795,2.84809513243263,0,1.28892668450986,0.464033759878494,2.78667122089031,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36664001461131,1.19298766662821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@TNFSF4 | |short_description=p9@TNFSF4 | ||
}} | }} |
Latest revision as of 17:22, 18 September 2015
Short description: | p9@TNFSF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TNFSF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_ENST00000545292_5end |
EntrezGene: | TNFSF4 |
HGNC: | 11934 |
UniProt: | Q8IV74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.42e-20 | 2 |
hepatic mesenchymal stem cell | 1.42e-20 | 2 |
Schwann cell | 3.17e-14 | 2 |
androgen binding protein secreting cell | 1.18e-11 | 1 |
seminiferous tubule epithelial cell | 1.18e-11 | 1 |
Sertoli cell | 1.18e-11 | 1 |
mesenchymal stem cell of Wharton's jelly | 2.18e-11 | 1 |
amnion mesenchymal stem cell | 3.83e-09 | 5 |
extraembryonic cell | 1.12e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
right ovary | 9.69e-19 | 5 |
female gonad | 1.32e-12 | 13 |
somatic layer of lateral plate mesoderm | 3.93e-12 | 8 |
gonad | 6.37e-12 | 21 |
indifferent external genitalia | 6.37e-12 | 21 |
indifferent gonad | 6.37e-12 | 21 |
gonad primordium | 6.37e-12 | 21 |
mesothelium | 1.18e-11 | 1 |
seminiferous tubule of testis | 1.18e-11 | 1 |
epithelium of male gonad | 1.18e-11 | 1 |
epithelial cord | 1.18e-11 | 1 |
sex cord | 1.18e-11 | 1 |
seminiferous tubule epithelium | 1.18e-11 | 1 |
testis sex cord | 1.18e-11 | 1 |
genital ridge | 1.18e-11 | 1 |
primitive sex cord of indifferent gonad | 1.18e-11 | 1 |
coelomic epithelium | 1.18e-11 | 1 |
external genitalia | 2.24e-11 | 22 |
extraembryonic membrane | 5.23e-07 | 14 |
membranous layer | 5.23e-07 | 14 |
extraembryonic structure | 6.72e-07 | 24 |
amnion | 9.12e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.89e-25 | 14 |
female reproductive organ cancer | 5.00e-13 | 27 |
reproductive organ cancer | 4.21e-12 | 29 |