FFCP PHASE1:Hg19::chr8:62200606..62200615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157807 | |EntrezGene=157807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23139 | |HGNC=23139 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=67bp_to_ENST00000521189_5end | |association_with_transcript=67bp_to_ENST00000521189_5end | ||
|cluster_id=chr8:62200606..62200615,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_4_at_CLVS1_5end | |description=CAGE_peak_4_at_CLVS1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!3.25e-08!8 | |ontology_enrichment_celltype=CL:0000047!3.25e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.20e-20;6!CL:0000404;1.20e-20;6!CL:0002319;3.61e-08;25!CL:0000047;6.14e-08;2 | |ontology_enrichment_celltype_v019=CL:0000540;1.20e-20;6!CL:0000404;1.20e-20;6!CL:0002319;3.61e-08;25!CL:0000047;6.14e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.32e-26,8;CL:0000540,1.86e-20,6;CL:0000031,1.86e-20,6;CL:0000404,1.86e-20,6;CL:0002319,4.32e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.20e-20;6!UBERON:0006215;1.36e-18;3!UBERON:0010122;6.14e-08;2 | |ontology_enrichment_development_v019=CL:0000031;1.20e-20;6!UBERON:0006215;1.36e-18;3!UBERON:0010122;6.14e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@CLVS1 | |short_description=p4@CLVS1 | ||
}} | }} |
Latest revision as of 17:15, 18 September 2015
Short description: | p4@CLVS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLVS1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 67bp_to_ENST00000521189_5end |
EntrezGene: | CLVS1 |
HGNC: | 23139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.32e-26 | 8 |
neuron | 1.86e-20 | 6 |
neuroblast | 1.86e-20 | 6 |
electrically signaling cell | 1.86e-20 | 6 |
neural cell | 4.32e-08 | 25 |