FFCP PHASE1:Hg19::chr19:45927425..45927467,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:45927425..45927467,-
|short_description=p12@ERCC1
|description=CAGE_peak_12_at_ERCC1_5end
|association_with_transcript=-248bp_to_ENST00000300853,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2067 | |EntrezGene=2067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3433 | |HGNC=3433 | ||
|TSSclassifier=strong | |||
|UniProt=P07992,Q96S40,B2RC01 | |UniProt=P07992,Q96S40,B2RC01 | ||
|association_with_transcript=-248bp_to_ENST00000300853,ENST00000340192,NM_001166049,NM_001983,uc002pbs.1,uc002pbt.1_5end | |||
|cluster_id=chr19:45927425..45927467,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_ERCC1_5end | |||
|id=chr19:45927425..45927467,- | |||
|ontology_enrichment_celltype=CL:0002057!9.35e-20!42;CL:0000860!5.11e-19!45;CL:0002194!1.49e-14!63;CL:0000576!1.49e-14!63;CL:0000040!1.49e-14!63;CL:0000559!1.49e-14!63;CL:0000839!4.37e-14!70;CL:0002009!8.59e-14!65;CL:0000557!9.77e-14!71;CL:0000766!3.86e-12!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.15e-59;33!CL:0002057;9.15e-59;33!CL:0000473;9.37e-44;39!CL:0000234;9.37e-44;39!CL:0000576;3.32e-27;48!CL:0000766;4.74e-15;69!CL:0000763;4.23e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.91e-49,42;CL:0002057,7.91e-49,42;CL:0000473,2.39e-47,48;CL:0000234,2.39e-47,48;CL:0002194,3.91e-37,59;CL:0000576,3.91e-37,59;CL:0000040,3.91e-37,59;CL:0000559,3.91e-37,59;CL:0002009,8.14e-36,61;CL:0000839,7.30e-33,66;CL:0000557,2.52e-32,67;CL:0000766,7.47e-30,72;CL:0000763,9.63e-19,108;CL:0000049,9.63e-19,108;CL:0002087,2.21e-17,115;CL:0002031,1.66e-16,120;CL:0000738,3.90e-14,136;CL:0002032,2.29e-11,161;CL:0000837,2.29e-11,161;CL:0000037,9.70e-11,168;CL:0000988,5.26e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-35;42!CL:0000049;7.09e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.40e-12!80;UBERON:0001474!3.74e-11!86;UBERON:0004765!1.42e-08!101;UBERON:0001434!1.42e-08!101;UBERON:0002390!2.95e-08!102;UBERON:0003061!2.95e-08!102;UBERON:0002204!1.39e-07!167;UBERON:0002298!4.49e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.17e-28,76;UBERON:0001474,8.41e-26,82;UBERON:0004765,3.36e-23,90;UBERON:0002405,2.44e-22,93;UBERON:0002390,5.09e-21,98;UBERON:0003061,5.09e-21,98;UBERON:0001434,1.58e-20,100;UBERON:0002193,9.63e-19,108;UBERON:0002204,1.25e-13,167;UBERON:0003081,3.81e-13,203;UBERON:0000926,9.23e-08,315;UBERON:0004120,9.23e-08,315;UBERON:0006603,9.23e-08,315 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,1.01778767145695,1.51150377475524,0.727752183563449,1.39457422143411,3.70051099219643,4.33588919253145,1.1507695692886,0.768482119587302,1.6553756092201,1.72372840368309,15.4916324060118,9.47985406160392,0.564727018627814,3.0019676506363,3.14612878223118,1.83650335422542,0.320929027076094,1.91801137739712,0,0.398927315243264,0,0.580418477257168,1.70215567407342,0.622822248995575,5.52747063564835,5.21482918420201,6.95004303056373,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,3.06633274931766,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0,0,0.306923946576125,0,0,0,0,0,0.308419387605311,0.710246901252508,0.164254312027618,1.03850885836724,0.348631135379878,0,0.200506470303285,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0.275673144969061,0,0,0.255679882248303,0,0,0,0.255225424989168,0.10115778085555,0,0,0.6970372701606,0.308033580176089,1.06461206063404,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.343972064943233,0.0967563312890851,0,0,0,0.264768380074501,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0.919036730290385,0,0,0,0,0,0.573409195690071,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0.829412415681711,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0,0,0,0.135939465953663,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0.404234377916439,0.217716747896961,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.363356758541113,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,1.01778767145695,1.51150377475524,0.727752183563449,1.39457422143411,3.70051099219643,4.33588919253145,1.1507695692886,0.768482119587302,1.6553756092201,1.72372840368309,15.4916324060118,9.47985406160392,0.564727018627814,3.0019676506363,3.14612878223118,1.83650335422542,0.320929027076094,1.91801137739712,0,0.398927315243264,0,0.580418477257168,1.70215567407342,0.622822248995575,5.52747063564835,5.21482918420201,6.95004303056373,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,3.06633274931766,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0,0,0.306923946576125,0,0,0,0,0,0.308419387605311,0.710246901252508,0.164254312027618,1.03850885836724,0.348631135379878,0,0.200506470303285,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0.275673144969061,0,0,0.255679882248303,0,0,0,0.255225424989168,0.10115778085555,0,0,0.6970372701606,0.308033580176089,1.06461206063404,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.343972064943233,0.0967563312890851,0,0,0,0.264768380074501,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0.919036730290385,0,0,0,0,0,0.573409195690071,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0.829412415681711,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0,0,0,0.135939465953663,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0.404234377916439,0.217716747896961,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@ERCC1 | |||
}} | }} |
Latest revision as of 17:10, 18 September 2015
Short description: | p12@ERCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ERCC1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -248bp_to_ENST00000300853, ENST00000340192, NM_001166049, NM_001983, uc002pbs.1, uc002pbt.1_5end |
EntrezGene: | ERCC1 |
HGNC: | 3433 |
UniProt: | P07992Q96S40B2RC01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.91e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.91e-49 | 42 |
defensive cell | 2.39e-47 | 48 |
phagocyte | 2.39e-47 | 48 |
monopoietic cell | 3.91e-37 | 59 |
monocyte | 3.91e-37 | 59 |
monoblast | 3.91e-37 | 59 |
promonocyte | 3.91e-37 | 59 |
macrophage dendritic cell progenitor | 8.14e-36 | 61 |
myeloid lineage restricted progenitor cell | 7.30e-33 | 66 |
granulocyte monocyte progenitor cell | 2.52e-32 | 67 |
myeloid leukocyte | 7.47e-30 | 72 |
myeloid cell | 9.63e-19 | 108 |
common myeloid progenitor | 9.63e-19 | 108 |
nongranular leukocyte | 2.21e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.66e-16 | 120 |
leukocyte | 3.90e-14 | 136 |
hematopoietic oligopotent progenitor cell | 2.29e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.29e-11 | 161 |
hematopoietic stem cell | 9.70e-11 | 168 |
hematopoietic cell | 5.26e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.17e-28 | 76 |
bone element | 8.41e-26 | 82 |
skeletal element | 3.36e-23 | 90 |
immune system | 2.44e-22 | 93 |
hematopoietic system | 5.09e-21 | 98 |
blood island | 5.09e-21 | 98 |
skeletal system | 1.58e-20 | 100 |
hemolymphoid system | 9.63e-19 | 108 |
musculoskeletal system | 1.25e-13 | 167 |
lateral plate mesoderm | 3.81e-13 | 203 |
mesoderm | 9.23e-08 | 315 |
mesoderm-derived structure | 9.23e-08 | 315 |
presumptive mesoderm | 9.23e-08 | 315 |