FFCP PHASE1:Hg19::chr11:61584267..61584282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3992 | |EntrezGene=3992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3574 | |HGNC=3574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000491310_5end | |association_with_transcript=-17bp_to_ENST00000491310_5end | ||
|cluster_id=chr11:61584267..61584282,- | |||
|description=CAGE_peak_5_at_FADS1_5end | |description=CAGE_peak_5_at_FADS1_5end | ||
|id=chr11:61584267..61584282,- | |id=chr11:61584267..61584282,- | ||
|ontology_enrichment_celltype=CL:0000333!3.81e-13!41;CL:0000133!2.61e-12!59;CL:0000055!2.16e-09!180;CL:0002319!2.49e-09!25;CL:0000221!3.32e-09!71;CL:0000095!5.17e-09!17;CL:0000123!5.17e-09!17;CL:0000220!4.52e-08!246;CL:0000243!6.24e-08!15;CL:0000125!6.24e-08!15;CL:0000030!6.24e-08!15;CL:0000339!6.24e-08!15;CL:0002321!6.81e-08!248 | |ontology_enrichment_celltype=CL:0000333!3.81e-13!41;CL:0000133!2.61e-12!59;CL:0000055!2.16e-09!180;CL:0002319!2.49e-09!25;CL:0000221!3.32e-09!71;CL:0000095!5.17e-09!17;CL:0000123!5.17e-09!17;CL:0000220!4.52e-08!246;CL:0000243!6.24e-08!15;CL:0000125!6.24e-08!15;CL:0000030!6.24e-08!15;CL:0000339!6.24e-08!15;CL:0002321!6.81e-08!248 | ||
|ontology_enrichment_celltype_v019=CL:0002319;8.75e-10;25!CL:0000095;1.57e-09;17!CL:0000243;2.22e-08;15!CL:0000125;2.22e-08;15 | |ontology_enrichment_celltype_v019=CL:0002319;8.75e-10;25!CL:0000095;1.57e-09;17!CL:0000243;2.22e-08;15!CL:0000125;2.22e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,4.83e-14,41;CL:0000133,1.69e-12,59;CL:0002319,1.01e-09,25;CL:0000095,1.90e-09,17;CL:0000123,1.90e-09,17;CL:0000221,2.58e-09,72;CL:0000243,2.67e-08,15;CL:0000125,2.67e-08,15;CL:0000030,2.67e-08,15;CL:0000339,2.67e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000339;2.22e-08;15 | |ontology_enrichment_development_v019=CL:0000339;2.22e-08;15 | ||
|ontology_enrichment_disease=DOID:162!8.38e-13!235;DOID:14566!1.70e-12!239;DOID:0050687!6.08e-11!143 | |ontology_enrichment_disease=DOID:162!8.38e-13!235;DOID:14566!1.70e-12!239;DOID:0050687!6.08e-11!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,9.93e-12,235;DOID:14566,1.84e-11,239;DOID:0050687,7.85e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0000924!2.10e-14!173;UBERON:0006601!2.10e-14!173;UBERON:0000481!6.11e-14!347;UBERON:0000119!3.48e-13!312;UBERON:0000073!3.97e-13!94;UBERON:0001016!3.97e-13!94;UBERON:0004121!7.51e-13!169;UBERON:0000483!1.43e-12!309;UBERON:0005743!2.88e-11!86;UBERON:0000475!4.03e-11!365;UBERON:0000064!4.37e-11!219;UBERON:0002346!1.27e-10!90;UBERON:0000033!6.84e-10!123;UBERON:0001017!7.34e-10!82;UBERON:0003075!5.13e-09!86;UBERON:0007284!5.13e-09!86;UBERON:0000955!9.73e-09!69;UBERON:0006238!9.73e-09!69;UBERON:0000922!1.88e-08!612;UBERON:0002050!1.94e-08!605;UBERON:0005423!1.94e-08!605;UBERON:0000923!2.04e-08!604;UBERON:0005291!2.04e-08!604;UBERON:0006598!2.04e-08!604;UBERON:0002532!2.04e-08!604;UBERON:0000153!3.03e-08!129;UBERON:0007811!3.03e-08!129;UBERON:0000477!6.39e-08!286;UBERON:0003056!2.36e-07!61;UBERON:0000019!9.64e-07!19;UBERON:0000047!9.64e-07!19;UBERON:0004088!9.64e-07!19;UBERON:0003072!9.64e-07!19;UBERON:0003071!9.64e-07!19;UBERON:0004128!9.64e-07!19 | |ontology_enrichment_uberon=UBERON:0000924!2.10e-14!173;UBERON:0006601!2.10e-14!173;UBERON:0000481!6.11e-14!347;UBERON:0000119!3.48e-13!312;UBERON:0000073!3.97e-13!94;UBERON:0001016!3.97e-13!94;UBERON:0004121!7.51e-13!169;UBERON:0000483!1.43e-12!309;UBERON:0005743!2.88e-11!86;UBERON:0000475!4.03e-11!365;UBERON:0000064!4.37e-11!219;UBERON:0002346!1.27e-10!90;UBERON:0000033!6.84e-10!123;UBERON:0001017!7.34e-10!82;UBERON:0003075!5.13e-09!86;UBERON:0007284!5.13e-09!86;UBERON:0000955!9.73e-09!69;UBERON:0006238!9.73e-09!69;UBERON:0000922!1.88e-08!612;UBERON:0002050!1.94e-08!605;UBERON:0005423!1.94e-08!605;UBERON:0000923!2.04e-08!604;UBERON:0005291!2.04e-08!604;UBERON:0006598!2.04e-08!604;UBERON:0002532!2.04e-08!604;UBERON:0000153!3.03e-08!129;UBERON:0007811!3.03e-08!129;UBERON:0000477!6.39e-08!286;UBERON:0003056!2.36e-07!61;UBERON:0000019!9.64e-07!19;UBERON:0000047!9.64e-07!19;UBERON:0004088!9.64e-07!19;UBERON:0003072!9.64e-07!19;UBERON:0003071!9.64e-07!19;UBERON:0004128!9.64e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000019;5.84e-07;19!UBERON:0000047;5.84e-07;19!UBERON:0004088;5.84e-07;19!UBERON:0010230;5.84e-07;19!UBERON:0000970;6.16e-07;20!UBERON:0006876;7.84e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000019;5.84e-07;19!UBERON:0000047;5.84e-07;19!UBERON:0004088;5.84e-07;19!UBERON:0010230;5.84e-07;19!UBERON:0000970;6.16e-07;20!UBERON:0006876;7.84e-07;11 | ||
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| ||
|short_description=p5@FADS1 | |short_description=p5@FADS1 | ||
}} | }} |
Latest revision as of 17:07, 18 September 2015
Short description: | p5@FADS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FADS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000491310_5end |
EntrezGene: | FADS1 |
HGNC: | 3574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 4.83e-14 | 41 |
neurectodermal cell | 1.69e-12 | 59 |
neural cell | 1.01e-09 | 25 |
neuron associated cell | 1.90e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.90e-09 | 17 |
ectodermal cell | 2.58e-09 | 72 |
glial cell (sensu Vertebrata) | 2.67e-08 | 15 |
glial cell | 2.67e-08 | 15 |
glioblast | 2.67e-08 | 15 |
glioblast (sensu Vertebrata) | 2.67e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.01e-14 | 171 |
ectoderm | 1.01e-14 | 171 |
presumptive ectoderm | 1.01e-14 | 171 |
nervous system | 3.95e-12 | 89 |
organ system subdivision | 1.06e-11 | 223 |
cell layer | 1.54e-11 | 309 |
epithelium | 5.99e-11 | 306 |
central nervous system | 4.20e-10 | 81 |
neurectoderm | 8.47e-10 | 86 |
structure with developmental contribution from neural crest | 2.95e-09 | 132 |
brain | 4.06e-09 | 68 |
future brain | 4.06e-09 | 68 |
neural plate | 3.55e-08 | 82 |
presumptive neural plate | 3.55e-08 | 82 |
pre-chordal neural plate | 4.29e-07 | 61 |
vasculature of organ | 7.22e-07 | 11 |
developing anatomical structure | 8.41e-07 | 581 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.93e-12 | 235 |
disease of cellular proliferation | 1.84e-11 | 239 |
cell type cancer | 7.85e-11 | 143 |