FFCP PHASE1:Hg19::chr7:44282202..44282211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=816 | |EntrezGene=816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1461 | |HGNC=1461 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-297bp_to_ENST00000433930_5end | |association_with_transcript=-297bp_to_ENST00000433930_5end | ||
|cluster_id=chr7:44282202..44282211,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_22_at_CAMK2B_5end | |description=CAGE_peak_22_at_CAMK2B_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.10e-46!57;UBERON:0005068!6.10e-46!57;UBERON:0006241!6.10e-46!57;UBERON:0007135!6.10e-46!57;UBERON:0002780!1.30e-44!41;UBERON:0001890!1.30e-44!41;UBERON:0006240!1.30e-44!41;UBERON:0002616!3.11e-44!59;UBERON:0003080!1.80e-43!42;UBERON:0000955!3.04e-43!69;UBERON:0006238!3.04e-43!69;UBERON:0001017!5.15e-42!82;UBERON:0001869!1.74e-41!32;UBERON:0002619!6.46e-41!22;UBERON:0002791!3.74e-40!33;UBERON:0005743!7.81e-40!86;UBERON:0007023!7.84e-40!115;UBERON:0001950!6.35e-39!20;UBERON:0002020!6.74e-39!34;UBERON:0003528!6.74e-39!34;UBERON:0001893!6.74e-39!34;UBERON:0000956!7.52e-36!25;UBERON:0000203!7.52e-36!25;UBERON:0000073!1.39e-35!94;UBERON:0001016!1.39e-35!94;UBERON:0002346!1.06e-32!90;UBERON:0001871!8.28e-32!7;UBERON:0003075!1.19e-31!86;UBERON:0007284!1.19e-31!86;UBERON:0003056!9.03e-29!61;UBERON:0000153!5.66e-27!129;UBERON:0007811!5.66e-27!129;UBERON:0000033!2.33e-26!123;UBERON:0000924!4.70e-20!173;UBERON:0006601!4.70e-20!173;UBERON:0004121!4.74e-19!169;UBERON:0000349!4.86e-17!5;UBERON:0002771!8.96e-17!3;UBERON:0002420!1.13e-14!9;UBERON:0007245!1.13e-14!9;UBERON:0010009!1.13e-14!9;UBERON:0010011!1.13e-14!9;UBERON:0000454!1.13e-14!9;UBERON:0000200!2.41e-14!6;UBERON:0000369!1.73e-12!4;UBERON:0002435!1.73e-12!4;UBERON:0000204!1.73e-12!4;UBERON:0010082!1.73e-12!4;UBERON:0000025!2.62e-12!194;UBERON:0001876!7.13e-12!2;UBERON:0002021!7.40e-10!5;UBERON:0004111!8.23e-10!241;UBERON:0000064!2.40e-08!219;UBERON:0004151!2.87e-08!3;UBERON:0000477!3.19e-08!286;UBERON:0005383!5.04e-08!3;UBERON:0005382!5.04e-08!3;UBERON:0001896!1.41e-07!3;UBERON:0005290!1.41e-07!3;UBERON:0010096!1.41e-07!3;UBERON:0009663!2.52e-07!7;UBERON:0000483!3.74e-07!309;UBERON:0000481!3.93e-07!347;UBERON:0001894!4.14e-07!7;UBERON:0006222!4.14e-07!7;UBERON:0004733!4.32e-07!12;UBERON:0002028!4.32e-07!12;UBERON:0007277!4.32e-07!12;UBERON:0000119!4.99e-07!312;UBERON:0002079!7.77e-07!1;UBERON:0002084!8.21e-07!1;UBERON:0002082!8.21e-07!1;UBERON:0004706!8.21e-07!1;UBERON:0003112!8.67e-07!1;UBERON:0000032!8.67e-07!1;UBERON:0005253!8.67e-07!1;UBERON:0003128!8.67e-07!1;UBERON:0002241!8.67e-07!1;UBERON:0001703!8.67e-07!1;UBERON:0004761!8.67e-07!1;UBERON:0009617!8.67e-07!1;UBERON:0001874!9.15e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!6.10e-46!57;UBERON:0005068!6.10e-46!57;UBERON:0006241!6.10e-46!57;UBERON:0007135!6.10e-46!57;UBERON:0002780!1.30e-44!41;UBERON:0001890!1.30e-44!41;UBERON:0006240!1.30e-44!41;UBERON:0002616!3.11e-44!59;UBERON:0003080!1.80e-43!42;UBERON:0000955!3.04e-43!69;UBERON:0006238!3.04e-43!69;UBERON:0001017!5.15e-42!82;UBERON:0001869!1.74e-41!32;UBERON:0002619!6.46e-41!22;UBERON:0002791!3.74e-40!33;UBERON:0005743!7.81e-40!86;UBERON:0007023!7.84e-40!115;UBERON:0001950!6.35e-39!20;UBERON:0002020!6.74e-39!34;UBERON:0003528!6.74e-39!34;UBERON:0001893!6.74e-39!34;UBERON:0000956!7.52e-36!25;UBERON:0000203!7.52e-36!25;UBERON:0000073!1.39e-35!94;UBERON:0001016!1.39e-35!94;UBERON:0002346!1.06e-32!90;UBERON:0001871!8.28e-32!7;UBERON:0003075!1.19e-31!86;UBERON:0007284!1.19e-31!86;UBERON:0003056!9.03e-29!61;UBERON:0000153!5.66e-27!129;UBERON:0007811!5.66e-27!129;UBERON:0000033!2.33e-26!123;UBERON:0000924!4.70e-20!173;UBERON:0006601!4.70e-20!173;UBERON:0004121!4.74e-19!169;UBERON:0000349!4.86e-17!5;UBERON:0002771!8.96e-17!3;UBERON:0002420!1.13e-14!9;UBERON:0007245!1.13e-14!9;UBERON:0010009!1.13e-14!9;UBERON:0010011!1.13e-14!9;UBERON:0000454!1.13e-14!9;UBERON:0000200!2.41e-14!6;UBERON:0000369!1.73e-12!4;UBERON:0002435!1.73e-12!4;UBERON:0000204!1.73e-12!4;UBERON:0010082!1.73e-12!4;UBERON:0000025!2.62e-12!194;UBERON:0001876!7.13e-12!2;UBERON:0002021!7.40e-10!5;UBERON:0004111!8.23e-10!241;UBERON:0000064!2.40e-08!219;UBERON:0004151!2.87e-08!3;UBERON:0000477!3.19e-08!286;UBERON:0005383!5.04e-08!3;UBERON:0005382!5.04e-08!3;UBERON:0001896!1.41e-07!3;UBERON:0005290!1.41e-07!3;UBERON:0010096!1.41e-07!3;UBERON:0009663!2.52e-07!7;UBERON:0000483!3.74e-07!309;UBERON:0000481!3.93e-07!347;UBERON:0001894!4.14e-07!7;UBERON:0006222!4.14e-07!7;UBERON:0004733!4.32e-07!12;UBERON:0002028!4.32e-07!12;UBERON:0007277!4.32e-07!12;UBERON:0000119!4.99e-07!312;UBERON:0002079!7.77e-07!1;UBERON:0002084!8.21e-07!1;UBERON:0002082!8.21e-07!1;UBERON:0004706!8.21e-07!1;UBERON:0003112!8.67e-07!1;UBERON:0000032!8.67e-07!1;UBERON:0005253!8.67e-07!1;UBERON:0003128!8.67e-07!1;UBERON:0002241!8.67e-07!1;UBERON:0001703!8.67e-07!1;UBERON:0004761!8.67e-07!1;UBERON:0009617!8.67e-07!1;UBERON:0001874!9.15e-07!1 | ||
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|short_description=p22@CAMK2B | |short_description=p22@CAMK2B | ||
}} | }} |
Latest revision as of 17:06, 18 September 2015
Short description: | p22@CAMK2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_CAMK2B_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -297bp_to_ENST00000433930_5end |
EntrezGene: | CAMK2B |
HGNC: | 1461 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 4.76e-57 | 6 |
middle temporal gyrus | 2.74e-50 | 2 |
amygdala | 4.52e-50 | 2 |
limbic system | 5.15e-21 | 5 |
neocortex | 4.86e-20 | 20 |
regional part of cerebral cortex | 2.02e-18 | 22 |
gyrus | 7.67e-18 | 6 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
basal ganglion | 2.45e-12 | 9 |
nuclear complex of neuraxis | 2.45e-12 | 9 |
aggregate regional part of brain | 2.45e-12 | 9 |
collection of basal ganglia | 2.45e-12 | 9 |
cerebral subcortex | 2.45e-12 | 9 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |