FFCP PHASE1:Hg19::chr17:9549018..9549049,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:9549018..9549049,+ to FFCP PHASE1:Hg19::chr17:9549018..9549049,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124739 | |EntrezGene=124739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20072 | |HGNC=20072 | ||
|TSSclassifier=strong | |||
|UniProt=Q70EL4 | |UniProt=Q70EL4 | ||
|association_with_transcript=68bp_to_AJ583817_5end | |||
|cluster_id=chr17:9549018..9549049,+ | |||
|description=CAGE_peak_4_at_USP43_5end | |||
|id=chr17:9549018..9549049,+ | |||
|ontology_enrichment_celltype=CL:1000507!1.75e-07!12;CL:1000494!1.75e-07!12;CL:0000066!3.76e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000239;6.90e-11;3!CL:1000615;6.90e-11;3!CL:0002306;6.90e-11;3!CL:1000507;3.09e-07;10!CL:1000494;3.09e-07;10!CL:1000497;3.52e-07;17!CL:0002518;3.52e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.67e-11,3;CL:1000615,7.67e-11,3;CL:0002306,7.67e-11,3;CL:1000507,2.81e-07,10;CL:1000494,2.81e-07,10;CL:1000497,3.77e-07,17;CL:0002518,3.77e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;3.05e-09;1!DOID:6193;8.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,3.06e-09,1;DOID:6193,1.32e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003075!8.85e-23!86;UBERON:0007284!8.85e-23!86;UBERON:0002346!5.49e-21!90;UBERON:0005743!1.30e-20!86;UBERON:0000033!2.13e-20!123;UBERON:0000153!4.07e-20!129;UBERON:0007811!4.07e-20!129;UBERON:0000955!1.03e-19!69;UBERON:0006238!1.03e-19!69;UBERON:0003056!1.42e-19!61;UBERON:0000064!1.47e-18!219;UBERON:0002616!2.30e-18!59;UBERON:0001017!3.34e-18!82;UBERON:0001869!3.83e-17!32;UBERON:0000073!3.99e-17!94;UBERON:0001016!3.99e-17!94;UBERON:0001049!5.62e-17!57;UBERON:0005068!5.62e-17!57;UBERON:0006241!5.62e-17!57;UBERON:0007135!5.62e-17!57;UBERON:0001893!6.58e-17!34;UBERON:0001950!5.10e-16!20;UBERON:0002791!6.73e-16!33;UBERON:0002619!9.77e-16!22;UBERON:0002020!2.32e-15!34;UBERON:0003528!2.32e-15!34;UBERON:0004121!2.95e-15!169;UBERON:0000956!1.78e-14!25;UBERON:0000203!1.78e-14!25;UBERON:0000924!2.02e-14!173;UBERON:0006601!2.02e-14!173;UBERON:0002780!1.01e-13!41;UBERON:0001890!1.01e-13!41;UBERON:0006240!1.01e-13!41;UBERON:0003080!3.42e-13!42;UBERON:0000062!1.17e-11!511;UBERON:0007625!5.64e-10!11;UBERON:0000481!1.17e-09!347;UBERON:0000200!1.21e-08!6;UBERON:0000475!1.26e-08!365;UBERON:0000970!2.30e-08!20;UBERON:0007023!4.12e-08!115;UBERON:0002104!8.93e-08!21;UBERON:0000019!1.30e-07!19;UBERON:0000047!1.30e-07!19;UBERON:0004088!1.30e-07!19;UBERON:0003072!1.30e-07!19;UBERON:0003071!1.30e-07!19;UBERON:0004128!1.30e-07!19;UBERON:0009773!1.75e-07!12;UBERON:0001231!1.75e-07!12;UBERON:0004810!1.75e-07!12;UBERON:0000477!4.71e-07!286;UBERON:0001872!5.59e-07!5;UBERON:0000020!9.23e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;8.56e-31;6!UBERON:0001870;6.70e-23;3!UBERON:0001950;1.60e-21;20!UBERON:0002619;1.47e-19;22!UBERON:0000956;3.51e-17;25!UBERON:0000203;3.51e-17;25!UBERON:0002702;7.25e-16;2!UBERON:0001869;1.25e-15;32!UBERON:0001893;1.65e-14;34!UBERON:0002791;3.99e-12;32!UBERON:0003528;8.74e-12;34!UBERON:0002020;8.74e-12;34!UBERON:0006853;6.90e-11;3!UBERON:0007685;6.90e-11;3!UBERON:0004134;6.90e-11;3!UBERON:0002581;8.65e-09;1!UBERON:0002022;8.65e-09;1!UBERON:0003112;8.65e-09;1!UBERON:0011158;8.65e-09;1!UBERON:0007190;8.65e-09;1!UBERON:0003128;8.65e-09;1!UBERON:0001703;8.65e-09;1!UBERON:0002241;8.65e-09;1!UBERON:0002780;3.75e-08;41!UBERON:0001890;3.75e-08;41!UBERON:0004211;3.09e-07;10!UBERON:0009773;3.09e-07;10!UBERON:0001231;3.09e-07;10!UBERON:0004810;3.09e-07;10!UBERON:0001872;7.24e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,8.45e-31,6;UBERON:0001870,6.07e-23,3;UBERON:0001950,9.31e-22,20;UBERON:0002619,8.96e-20,22;UBERON:0000956,2.28e-17,25;UBERON:0000203,2.28e-17,25;UBERON:0001869,5.84e-17,32;UBERON:0001893,6.51e-16,34;UBERON:0002702,7.88e-16,2;UBERON:0002791,1.87e-13,32;UBERON:0002780,4.94e-13,41;UBERON:0001890,4.94e-13,41;UBERON:0003080,4.94e-13,41;UBERON:0006240,4.94e-13,41;UBERON:0003056,1.15e-12,61;UBERON:0003528,1.27e-12,34;UBERON:0002020,1.27e-12,34;UBERON:0001049,1.97e-11,56;UBERON:0005068,1.97e-11,56;UBERON:0006241,1.97e-11,56;UBERON:0007135,1.97e-11,56;UBERON:0006853,7.67e-11,3;UBERON:0007685,7.67e-11,3;UBERON:0004134,7.67e-11,3;UBERON:0003075,8.83e-11,82;UBERON:0007284,8.83e-11,82;UBERON:0002346,3.46e-10,86;UBERON:0000073,7.84e-10,53;UBERON:0002616,7.84e-10,53;UBERON:0010314,8.69e-10,132;UBERON:0010371,1.24e-09,104;UBERON:0002022,4.19e-09,1;UBERON:0000955,5.63e-09,68;UBERON:0006238,5.63e-09,68;UBERON:0003112,5.70e-09,1;UBERON:0011158,5.70e-09,1;UBERON:0003128,5.70e-09,1;UBERON:0001703,5.70e-09,1;UBERON:0002241,5.70e-09,1;UBERON:0004761,5.70e-09,1;UBERON:0009617,5.70e-09,1;UBERON:0001017,6.42e-09,81;UBERON:0007190,1.22e-08,1;UBERON:0002581,1.42e-08,1;UBERON:0001016,7.29e-08,89;UBERON:0004810,2.81e-07,10;UBERON:0001872,7.70e-07,5 | |||
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| ||
|short_description=p4@USP43 | |||
}} | }} |
Latest revision as of 17:00, 18 September 2015
Short description: | p4@USP43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USP43_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_AJ583817_5end |
EntrezGene: | USP43 |
HGNC: | 20072 |
UniProt: | Q70EL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.67e-11 | 3 |
kidney cortex tubule cell | 7.67e-11 | 3 |
epithelial cell of proximal tubule | 7.67e-11 | 3 |
kidney tubule cell | 2.81e-07 | 10 |
nephron tubule epithelial cell | 2.81e-07 | 10 |
kidney cell | 3.77e-07 | 17 |
kidney epithelial cell | 3.77e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 3.06e-09 | 1 |
epithelioid sarcoma | 1.32e-08 | 1 |