FFCP PHASE1:Hg19::chr12:49761224..49761259,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:49761224..49761259,+ to FFCP PHASE1:Hg19::chr12:49761224..49761259,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65244 | |EntrezGene=65244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18650 | |HGNC=18650 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XZ4 | |UniProt=Q86XZ4 | ||
|association_with_transcript=0bp_to_ENST00000321898,ENST00000549375,ENST00000553127_5end | |||
|cluster_id=chr12:49761224..49761259,+ | |||
|description=CAGE_peak_1_at_SPATS2_5end | |||
|id=chr12:49761224..49761259,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.24e-14!246;CL:0002321!2.14e-14!248;CL:0000066!8.13e-12!254;CL:0000055!9.35e-11!180;CL:0000222!1.15e-10!119;CL:0000187!2.16e-09!54;CL:0000680!5.87e-09!57;CL:0000056!5.87e-09!57;CL:0000355!5.87e-09!57;CL:0000393!2.12e-08!60;CL:0000211!2.12e-08!60;CL:0000183!1.29e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.10e-14,250;CL:0000066,8.46e-12,253;CL:0000222,1.26e-10,121;CL:0000187,2.57e-09,55;CL:0000680,6.78e-09,58;CL:0000056,6.78e-09,58;CL:0000355,6.78e-09,58;CL:0000393,2.39e-08,61;CL:0000211,2.39e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.01e-13!235;DOID:0050687!6.72e-13!143;DOID:14566!1.02e-12!239;DOID:305!3.68e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.45e-13,143;DOID:162,6.63e-13,235;DOID:14566,1.21e-12,239;DOID:305,3.58e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.42e-12!79;UBERON:0007798!1.42e-12!79;UBERON:0000490!1.88e-12!138;UBERON:0000481!1.41e-11!347;UBERON:0000119!1.49e-11!312;UBERON:0000055!5.36e-11!69;UBERON:0000483!6.38e-11!309;UBERON:0001981!3.60e-10!60;UBERON:0007500!3.60e-10!60;UBERON:0004537!3.60e-10!60;UBERON:0006965!3.60e-10!60;UBERON:0004872!4.92e-10!84;UBERON:0003104!2.55e-09!238;UBERON:0009142!2.55e-09!238;UBERON:0001048!1.55e-08!168;UBERON:0001134!1.66e-08!61;UBERON:0002036!1.66e-08!61;UBERON:0003082!1.66e-08!61;UBERON:0002385!1.92e-08!63;UBERON:0001015!1.92e-08!63;UBERON:0000383!1.92e-08!63;UBERON:0000486!1.93e-08!82;UBERON:0000477!2.80e-08!286;UBERON:0000475!5.56e-08!365;UBERON:0001637!1.02e-07!42;UBERON:0003509!1.02e-07!42;UBERON:0004572!1.02e-07!42;UBERON:0003914!1.43e-07!118;UBERON:0004535!2.10e-07!110;UBERON:0002100!2.26e-07!216;UBERON:0004290!2.69e-07!70;UBERON:0000914!3.08e-07!83;UBERON:0002329!3.08e-07!83;UBERON:0003077!3.08e-07!83;UBERON:0003059!3.08e-07!83;UBERON:0007282!3.08e-07!83;UBERON:0009618!3.08e-07!83;UBERON:0007285!3.08e-07!83;UBERON:0004111!5.62e-07!241;UBERON:0004119!7.85e-07!169;UBERON:0000925!7.85e-07!169;UBERON:0006595!7.85e-07!169;UBERON:0001009!8.85e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,3.23e-12,78;UBERON:0007798,3.23e-12,78;UBERON:0000490,1.44e-11,148;UBERON:0000055,1.21e-10,68;UBERON:0000119,3.41e-10,309;UBERON:0007500,7.77e-10,59;UBERON:0001981,7.77e-10,59;UBERON:0004537,7.77e-10,59;UBERON:0006965,7.77e-10,59;UBERON:0004872,9.92e-10,83;UBERON:0000483,1.33e-09,306;UBERON:0001134,1.86e-08,62;UBERON:0002036,1.86e-08,62;UBERON:0003082,1.86e-08,62;UBERON:0000486,2.06e-08,83;UBERON:0002385,2.15e-08,64;UBERON:0001015,2.15e-08,64;UBERON:0000383,2.15e-08,64;UBERON:0001048,9.45e-08,160;UBERON:0001637,1.00e-07,42;UBERON:0003509,1.00e-07,42;UBERON:0004572,1.00e-07,42;UBERON:0003914,1.32e-07,117;UBERON:0002100,1.50e-07,199;UBERON:0003104,1.57e-07,160;UBERON:0009142,1.57e-07,160;UBERON:0002329,2.88e-07,71;UBERON:0003059,2.88e-07,71;UBERON:0007282,2.88e-07,71;UBERON:0004290,2.88e-07,71;UBERON:0009618,2.88e-07,71;UBERON:0004535,3.60e-07,109;UBERON:0003077,4.98e-07,72;UBERON:0007285,4.98e-07,72;UBERON:0007524,8.21e-07,73;UBERON:0004111,9.31e-07,240 | |||
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| ||
|short_description=p1@SPATS2 | |||
}} | }} |
Latest revision as of 16:23, 18 September 2015
Short description: | p1@SPATS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPATS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000321898, ENST00000549375, ENST00000553127_5end |
EntrezGene: | SPATS2 |
HGNC: | 18650 |
UniProt: | Q86XZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.10e-14 | 250 |
epithelial cell | 8.46e-12 | 253 |
mesodermal cell | 1.26e-10 | 121 |
muscle cell | 2.57e-09 | 55 |
muscle precursor cell | 6.78e-09 | 58 |
myoblast | 6.78e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.78e-09 | 58 |
electrically responsive cell | 2.39e-08 | 61 |
electrically active cell | 2.39e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.45e-13 | 143 |
cancer | 6.63e-13 | 235 |
disease of cellular proliferation | 1.21e-12 | 239 |
carcinoma | 3.58e-08 | 106 |