FFCP PHASE1:Hg19::chr6:38690668..38690714,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2952 | |||
|TSSclassifier=strong | |||
|UniProt=Q96JB1 | |||
|association_with_transcript=116bp_to_uc003ooe.1_5end | |||
|cluster_id=chr6:38690668..38690714,+ | |||
|description=CAGE_peak_1_at_DNAH8_5end | |||
|id=chr6:38690668..38690714,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;2.35e-07;2!CL:0000054;3.59e-07;2!CL:0000137;3.59e-07;2!CL:0000092;3.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.28e-07,2;CL:0000054,3.48e-07,2;CL:0000137,3.48e-07,2;CL:0000092,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.06e-13;1!UBERON:0004872;1.47e-07;7 | |||
|ontology_enrichment_disease=DOID:1036!7.51e-22!8;DOID:0060085!2.90e-08!1;DOID:3165!2.90e-08!1;DOID:0060121!2.90e-08!1;DOID:2438!2.90e-08!1;DOID:4418!2.90e-08!1;DOID:1240!7.92e-08!39;DOID:8692!1.57e-07!31;DOID:2531!1.67e-07!51;DOID:0060083!1.67e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.63e-37;8!DOID:0060085;4.50e-13;1!DOID:3165;4.50e-13;1!DOID:0060121;4.50e-13;1!DOID:2438;4.50e-13;1!DOID:4418;4.50e-13;1!DOID:1240;2.22e-10;39!DOID:8692;1.43e-09;31!DOID:2531;1.17e-08;51!DOID:0060083;1.17e-08;51!DOID:200;3.59e-07;2!DOID:4305;3.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.50e-37,8;DOID:0060085,4.23e-13,1;DOID:3165,4.23e-13,1;DOID:0060121,4.23e-13,1;DOID:2438,4.23e-13,1;DOID:4418,4.23e-13,1;DOID:2531,9.15e-11,51;DOID:0060083,9.15e-11,51;DOID:1240,1.33e-10,39;DOID:8692,1.39e-09,31;DOID:200,3.48e-07,2;DOID:4305,3.48e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002106!7.18e-10!3;UBERON:0004854!7.18e-10!3;UBERON:0009034!7.18e-10!3;UBERON:0002095!7.18e-10!3;UBERON:0004782!7.18e-10!3;UBERON:0003281!7.18e-10!3;UBERON:0009664!7.18e-10!3;UBERON:0002296!7.18e-10!3;UBERON:0005602!7.18e-10!3;UBERON:0001179!7.18e-10!3;UBERON:0006293!7.18e-10!3;UBERON:0004177!5.23e-09!7;UBERON:0001282!3.34e-08!1;UBERON:0009842!3.34e-08!1;UBERON:0003704!3.34e-08!1;UBERON:0001171!3.34e-08!1;UBERON:0001172!3.34e-08!1;UBERON:0000945!3.66e-08!8;UBERON:0010039!3.66e-08!8;UBERON:0001301!9.94e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.06e-13;1!UBERON:0009842;6.06e-13;1!UBERON:0003704;6.06e-13;1!UBERON:0001171;6.06e-13;1!UBERON:0001172;6.06e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,5.38e-13,1;UBERON:0009842,5.38e-13,1;UBERON:0003704,5.38e-13,1;UBERON:0001171,5.38e-13,1;UBERON:0001172,5.38e-13,1;UBERON:0000945,9.11e-07,8;UBERON:0010039,9.11e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27463817604702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0069705830706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,1.89453753271713,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,3.76008784295104,0,0,0,0.31900115973192,0,0,0,0,0,6.76786981851542,5.88187602953219,7.21632823996124,16.8880822124525,7.78789237003856,0,0,0,12.7669297447834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,4.96786529257474,0,0,0,0,5.79447867788178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14984426985683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10458295569236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28943712929488,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27336094654718,2.94760543171796,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@DNAH8 | |||
}} |
Latest revision as of 16:17, 18 September 2015
Short description: | p1@DNAH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNAH8_5end |
Coexpression cluster: | NA |
Association with transcript: | 116bp_to_uc003ooe.1_5end |
EntrezGene: | DNAH8 |
HGNC: | 2952 |
UniProt: | Q96JB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.28e-07 | 2 |
bone matrix secreting cell | 3.48e-07 | 2 |
osteocyte | 3.48e-07 | 2 |
osteoclast | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 5.38e-13 | 1 |
acinus | 5.38e-13 | 1 |
intrahepatic bile duct | 5.38e-13 | 1 |
portal lobule | 5.38e-13 | 1 |
hepatic acinus | 5.38e-13 | 1 |
stomach | 9.11e-07 | 8 |
food storage organ | 9.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.50e-37 | 8 |
organ system benign neoplasm | 4.23e-13 | 1 |
skin benign neoplasm | 4.23e-13 | 1 |
integumentary system benign neoplasm | 4.23e-13 | 1 |
dermis tumor | 4.23e-13 | 1 |
cutaneous fibrous histiocytoma | 4.23e-13 | 1 |
hematologic cancer | 9.15e-11 | 51 |
immune system cancer | 9.15e-11 | 51 |
leukemia | 1.33e-10 | 39 |
myeloid leukemia | 1.39e-09 | 31 |
giant cell tumor | 3.48e-07 | 2 |
bone giant cell tumor | 3.48e-07 | 2 |