FFCP PHASE1:Hg19::chr5:72744594..72744609,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2297 | |EntrezGene=2297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3802 | |HGNC=3802 | ||
|TSSclassifier=strong | |||
|UniProt=Q16676 | |UniProt=Q16676 | ||
|association_with_transcript=-242bp_to_ENST00000328926,NM_004472,uc003kcp.2_5end | |association_with_transcript=-242bp_to_ENST00000328926,NM_004472,uc003kcp.2_5end | ||
|cluster_id=chr5:72744594..72744609,- | |||
|coexpression_cluster_id=C2827 | |||
|description=CAGE_peak_1_at_FOXD1_5end | |description=CAGE_peak_1_at_FOXD1_5end | ||
|id=chr5:72744594..72744609,- | |id=chr5:72744594..72744609,- | ||
|ontology_enrichment_celltype=CL:0000055!9.87e-33!180;CL:0000057!6.11e-21!75;CL:0000183!2.81e-11!59;CL:0002620!4.98e-11!23;CL:0000359!1.19e-10!32;CL:0000192!7.68e-10!42;CL:0000514!7.68e-10!42;CL:0000548!9.25e-10!679;CL:0000004!9.25e-10!679;CL:0000255!9.25e-10!679;CL:0000187!1.23e-09!54;CL:0000680!1.52e-09!57;CL:0000056!1.52e-09!57;CL:0000355!1.52e-09!57;CL:0000012!5.93e-09!682;CL:0000220!3.40e-08!246;CL:0002321!7.93e-08!248;CL:0000393!2.66e-07!60;CL:0000211!2.66e-07!60;CL:0000035!6.45e-07!20 | |ontology_enrichment_celltype=CL:0000055!9.87e-33!180;CL:0000057!6.11e-21!75;CL:0000183!2.81e-11!59;CL:0002620!4.98e-11!23;CL:0000359!1.19e-10!32;CL:0000192!7.68e-10!42;CL:0000514!7.68e-10!42;CL:0000548!9.25e-10!679;CL:0000004!9.25e-10!679;CL:0000255!9.25e-10!679;CL:0000187!1.23e-09!54;CL:0000680!1.52e-09!57;CL:0000056!1.52e-09!57;CL:0000355!1.52e-09!57;CL:0000012!5.93e-09!682;CL:0000220!3.40e-08!246;CL:0002321!7.93e-08!248;CL:0000393!2.66e-07!60;CL:0000211!2.66e-07!60;CL:0000035!6.45e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.10e-11;23!CL:0000359;1.93e-10;32!CL:0000057;1.32e-09;73!CL:0000192;9.60e-08;43!CL:0002320;4.96e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.11e-21,76;CL:0002620,2.34e-11,23;CL:0000359,5.79e-11,32;CL:0000192,1.94e-10,43;CL:0000514,1.94e-10,43;CL:0000187,4.86e-10,55;CL:0000680,6.03e-10,58;CL:0000056,6.03e-10,58;CL:0000355,6.03e-10,58;CL:0002321,5.73e-08,250;CL:0000393,2.61e-07,61;CL:0000211,2.61e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;9.60e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.57e-24!365;UBERON:0002100!6.43e-15!216;UBERON:0000914!3.27e-14!83;UBERON:0002329!3.27e-14!83;UBERON:0003077!3.27e-14!83;UBERON:0003059!3.27e-14!83;UBERON:0007282!3.27e-14!83;UBERON:0009618!3.27e-14!83;UBERON:0007285!3.27e-14!83;UBERON:0003102!5.29e-14!95;UBERON:0002199!2.54e-13!45;UBERON:0002416!2.54e-13!45;UBERON:0002097!3.21e-13!40;UBERON:0000486!2.21e-12!82;UBERON:0005256!4.44e-12!143;UBERON:0004290!1.07e-10!70;UBERON:0000468!1.93e-10!659;UBERON:0000481!6.40e-09!347;UBERON:0003104!1.39e-08!238;UBERON:0009142!1.39e-08!238;UBERON:0000480!3.16e-08!626;UBERON:0001134!3.29e-08!61;UBERON:0002036!3.29e-08!61;UBERON:0003082!3.29e-08!61;UBERON:0000467!4.90e-08!625;UBERON:0002385!1.23e-07!63;UBERON:0001015!1.23e-07!63;UBERON:0000383!1.23e-07!63;UBERON:0000119!2.99e-07!312 | |ontology_enrichment_uberon=UBERON:0000475!3.57e-24!365;UBERON:0002100!6.43e-15!216;UBERON:0000914!3.27e-14!83;UBERON:0002329!3.27e-14!83;UBERON:0003077!3.27e-14!83;UBERON:0003059!3.27e-14!83;UBERON:0007282!3.27e-14!83;UBERON:0009618!3.27e-14!83;UBERON:0007285!3.27e-14!83;UBERON:0003102!5.29e-14!95;UBERON:0002199!2.54e-13!45;UBERON:0002416!2.54e-13!45;UBERON:0002097!3.21e-13!40;UBERON:0000486!2.21e-12!82;UBERON:0005256!4.44e-12!143;UBERON:0004290!1.07e-10!70;UBERON:0000468!1.93e-10!659;UBERON:0000481!6.40e-09!347;UBERON:0003104!1.39e-08!238;UBERON:0009142!1.39e-08!238;UBERON:0000480!3.16e-08!626;UBERON:0001134!3.29e-08!61;UBERON:0002036!3.29e-08!61;UBERON:0003082!3.29e-08!61;UBERON:0000467!4.90e-08!625;UBERON:0002385!1.23e-07!63;UBERON:0001015!1.23e-07!63;UBERON:0000383!1.23e-07!63;UBERON:0000119!2.99e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.91e-10;41!UBERON:0002199;7.19e-09;46!UBERON:0002416;7.19e-09;46!UBERON:0003102;1.98e-08;50!UBERON:0010371;7.52e-07;31!UBERON:0001434;9.41e-07;36 | |||
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| ||
|short_description=p1@FOXD1 | |short_description=p1@FOXD1 | ||
}} | }} |
Latest revision as of 16:02, 18 September 2015
Short description: | p1@FOXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXD1_5end |
Coexpression cluster: | C2827_Pericytes_Osteoblast_Smooth_astrocytoma_Fibroblast_transitionalcell_alveolar |
Association with transcript: | -242bp_to_ENST00000328926, NM_004472, uc003kcp.2_5end |
EntrezGene: | FOXD1 |
HGNC: | 3802 |
UniProt: | Q16676 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.11e-21 | 76 |
skin fibroblast | 2.34e-11 | 23 |
vascular associated smooth muscle cell | 5.79e-11 | 32 |
smooth muscle cell | 1.94e-10 | 43 |
smooth muscle myoblast | 1.94e-10 | 43 |
muscle cell | 4.86e-10 | 55 |
muscle precursor cell | 6.03e-10 | 58 |
myoblast | 6.03e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.03e-10 | 58 |
embryonic cell | 5.73e-08 | 250 |
electrically responsive cell | 2.61e-07 | 61 |
electrically active cell | 2.61e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.81e-15 | 99 |
skin of body | 2.03e-13 | 41 |
integument | 2.31e-13 | 46 |
integumental system | 2.31e-13 | 46 |
multilaminar epithelium | 8.56e-13 | 83 |
epithelial vesicle | 3.80e-12 | 78 |
trunk | 5.79e-12 | 199 |
dense mesenchyme tissue | 2.37e-11 | 73 |
somite | 4.74e-11 | 71 |
presomitic mesoderm | 4.74e-11 | 71 |
presumptive segmental plate | 4.74e-11 | 71 |
dermomyotome | 4.74e-11 | 71 |
trunk paraxial mesoderm | 4.74e-11 | 71 |
paraxial mesoderm | 5.91e-11 | 72 |
presumptive paraxial mesoderm | 5.91e-11 | 72 |
mesenchyme | 1.29e-09 | 160 |
entire embryonic mesenchyme | 1.29e-09 | 160 |
skeletal muscle tissue | 1.76e-08 | 62 |
striated muscle tissue | 1.76e-08 | 62 |
myotome | 1.76e-08 | 62 |
trunk mesenchyme | 5.51e-08 | 122 |
muscle tissue | 8.64e-08 | 64 |
musculature | 8.64e-08 | 64 |
musculature of body | 8.64e-08 | 64 |
head | 3.67e-07 | 56 |
cell layer | 4.08e-07 | 309 |