FFCP PHASE1:Hg19::chr21:44590382..44590411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1409 | |EntrezGene=1409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2388 | |HGNC=2388 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000468016_5end | |association_with_transcript=45bp_to_ENST00000468016_5end | ||
|cluster_id=chr21:44590382..44590411,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_3_at_CRYAA_5end | |description=CAGE_peak_3_at_CRYAA_5end | ||
|id=chr21:44590382..44590411,+ | |id=chr21:44590382..44590411,+ | ||
|ontology_enrichment_celltype=CL:0002586!2.39e-20!3;CL:0000149!2.06e-15!4;CL:0000181!2.65e-14!12;CL:0000417!2.65e-14!12;CL:0000668!2.65e-14!12;CL:0000414!2.65e-14!12;CL:0000412!2.65e-14!12;CL:0000182!2.65e-14!12;CL:0000147!1.32e-11!14;CL:0002603!6.28e-10!3 | |ontology_enrichment_celltype=CL:0002586!2.39e-20!3;CL:0000149!2.06e-15!4;CL:0000181!2.65e-14!12;CL:0000417!2.65e-14!12;CL:0000668!2.65e-14!12;CL:0000414!2.65e-14!12;CL:0000412!2.65e-14!12;CL:0000182!2.65e-14!12;CL:0000147!1.32e-11!14;CL:0002603!6.28e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.22e-31;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.23e-31,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.63e-22;11!UBERON:0009497;4.10e-19;13!UBERON:0003104;1.36e-17;31!UBERON:0001041;1.86e-08;30!UBERON:0003918;4.52e-07;10!UBERON:0007687;4.52e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!2.22e-21!5;UBERON:0005388!2.22e-21!5;UBERON:0001802!2.22e-21!5;UBERON:0001781!2.39e-20!3;UBERON:0001782!2.39e-20!3;UBERON:0005424!2.39e-20!3;UBERON:0002107!1.16e-12!19;UBERON:0006925!1.16e-12!19;UBERON:0008836!1.16e-12!19;UBERON:0000970!1.79e-11!20;UBERON:0002104!6.65e-11!21;UBERON:0008835!7.34e-11!22;UBERON:0003894!7.34e-11!22;UBERON:0009854!2.30e-10!23;UBERON:0000020!6.54e-10!23;UBERON:0007625!8.39e-10!11;UBERON:0007499!1.72e-09!25;UBERON:0009497!1.72e-09!25;UBERON:0000015!1.72e-09!25;UBERON:0002423!1.72e-09!25;UBERON:0006235!1.72e-09!25;UBERON:0004161!1.72e-09!25;UBERON:0001032!1.78e-09!24;UBERON:0004456!1.78e-09!24;UBERON:0005057!4.20e-09!26;UBERON:0009856!4.20e-09!26;UBERON:0005172!1.05e-08!55;UBERON:0005173!1.05e-08!55;UBERON:0000019!1.50e-08!19;UBERON:0000047!1.50e-08!19;UBERON:0004088!1.50e-08!19;UBERON:0003072!1.50e-08!19;UBERON:0003071!1.50e-08!19;UBERON:0004128!1.50e-08!19;UBERON:0001456!1.02e-07!21;UBERON:0002417!1.04e-07!61;UBERON:0000916!1.04e-07!61;UBERON:0002902!1.06e-07!1;UBERON:0009899!1.06e-07!1;UBERON:0002365!1.53e-07!31;UBERON:0002330!1.53e-07!31;UBERON:0003075!3.82e-07!86;UBERON:0007284!3.82e-07!86;UBERON:0003056!4.22e-07!61;UBERON:0002346!9.50e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.29e-28;19!UBERON:0006925;1.29e-28;19!UBERON:0002423;9.96e-22;25!UBERON:0002365;5.08e-17;31!UBERON:0002330;5.08e-17;31!UBERON:0002368;5.08e-14;33!UBERON:0005172;1.46e-11;52!UBERON:0005173;1.46e-11;52!UBERON:0000949;1.56e-11;43!UBERON:0002417;2.61e-09;58!UBERON:0000916;2.61e-09;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.32e-28,19;UBERON:0006925,1.32e-28,19;UBERON:0008836,1.32e-28,19;UBERON:0008835,1.08e-24,22;UBERON:0003894,1.08e-24,22;UBERON:0009854,1.29e-23,23;UBERON:0007499,1.01e-21,25;UBERON:0009497,1.01e-21,25;UBERON:0000015,1.01e-21,25;UBERON:0002423,1.01e-21,25;UBERON:0006235,1.01e-21,25;UBERON:0004161,1.01e-21,25;UBERON:0009856,7.01e-21,26;UBERON:0002365,1.72e-17,31;UBERON:0002330,1.72e-17,31;UBERON:0005172,1.80e-17,54;UBERON:0005173,1.80e-17,54;UBERON:0002417,1.15e-15,60;UBERON:0000916,1.15e-15,60;UBERON:0002368,1.79e-15,35;UBERON:0000949,5.44e-12,45;UBERON:0003929,5.94e-10,54;UBERON:0002530,4.36e-09,59;UBERON:0005177,4.82e-09,101;UBERON:0009569,4.38e-08,112 | |||
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|short_description=p3@CRYAA | |short_description=p3@CRYAA | ||
}} | }} |
Latest revision as of 16:01, 18 September 2015
Short description: | p3@CRYAA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRYAA_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 45bp_to_ENST00000468016_5end |
EntrezGene: | CRYAA |
HGNC: | 2388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.23e-31 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.32e-28 | 19 |
digestive gland | 1.32e-28 | 19 |
liver bud | 1.32e-28 | 19 |
hepatic diverticulum | 1.08e-24 | 22 |
liver primordium | 1.08e-24 | 22 |
digestive tract diverticulum | 1.29e-23 | 23 |
epithelial sac | 1.01e-21 | 25 |
epithelium of foregut-midgut junction | 1.01e-21 | 25 |
anatomical boundary | 1.01e-21 | 25 |
hepatobiliary system | 1.01e-21 | 25 |
foregut-midgut junction | 1.01e-21 | 25 |
septum transversum | 1.01e-21 | 25 |
sac | 7.01e-21 | 26 |
exocrine gland | 1.72e-17 | 31 |
exocrine system | 1.72e-17 | 31 |
abdomen element | 1.80e-17 | 54 |
abdominal segment element | 1.80e-17 | 54 |
abdominal segment of trunk | 1.15e-15 | 60 |
abdomen | 1.15e-15 | 60 |
endocrine gland | 1.79e-15 | 35 |
endocrine system | 5.44e-12 | 45 |
gut epithelium | 5.94e-10 | 54 |
gland | 4.36e-09 | 59 |
trunk region element | 4.82e-09 | 101 |
subdivision of trunk | 4.38e-08 | 112 |