FFCP PHASE1:Hg19::chr8:59572512..59572526,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:59572512..59572526,-
|short_description=p20@NSMAF
|description=CAGE_peak_20_at_NSMAF_5end
|association_with_transcript=-108bp_to_NM_003580,uc003xtt.2,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt=Q92636 | |UniProt=Q92636 | ||
|association_with_transcript=-108bp_to_NM_003580,uc003xtt.2,uc003xtu.2_5end | |||
|cluster_id=chr8:59572512..59572526,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_20_at_NSMAF_5end | |||
|id=chr8:59572512..59572526,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.12e-51;7!CL:0000586;6.12e-51;7!CL:0002564;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.12e-51,7;CL:0000586,6.12e-51,7;CL:0002564,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.31e-36;10!UBERON:0005564;7.31e-36;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.33e-16;22!DOID:2994;1.33e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.33e-16,22;DOID:2994,1.33e-16,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.16e-44;8!UBERON:0003135;1.17e-32;11!UBERON:0000991;2.28e-17;21!UBERON:0003101;1.33e-16;22!UBERON:0000079;1.33e-16;22!UBERON:0000922;1.02e-09;49!UBERON:0002242;1.35e-08;3!UBERON:0002323;6.52e-08;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.16e-44,8;UBERON:0003135,1.17e-32,11;UBERON:0000991,2.28e-17,21;UBERON:0009196,2.28e-17,21;UBERON:0009117,2.28e-17,21;UBERON:0005564,2.28e-17,21;UBERON:0004176,1.33e-16,22;UBERON:0003101,1.33e-16,22;UBERON:0000079,1.33e-16,22;UBERON:0002242,1.51e-08,3;UBERON:0003068,1.51e-08,3;UBERON:0002328,1.51e-08,3;UBERON:0004880,1.51e-08,3;UBERON:0002323,3.83e-08,46;UBERON:0003133,8.12e-08,48;UBERON:0004458,1.16e-07,49;UBERON:0003886,5.55e-07,54 | |||
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| ||
|short_description=p20@NSMAF | |||
}} | }} |
Latest revision as of 15:50, 18 September 2015
Short description: | p20@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NSMAF_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -108bp_to_NM_003580, uc003xtt.2, uc003xtu.2_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | Q92636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.12e-51 | 7 |
germ cell | 6.12e-51 | 7 |
nucleus pulposus cell of intervertebral disc | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.16e-44 | 8 |
male reproductive organ | 1.17e-32 | 11 |
gonad | 2.28e-17 | 21 |
indifferent external genitalia | 2.28e-17 | 21 |
indifferent gonad | 2.28e-17 | 21 |
gonad primordium | 2.28e-17 | 21 |
external genitalia | 1.33e-16 | 22 |
male organism | 1.33e-16 | 22 |
male reproductive system | 1.33e-16 | 22 |
nucleus pulposus | 1.51e-08 | 3 |
axial mesoderm | 1.51e-08 | 3 |
notochord | 1.51e-08 | 3 |
chordamesoderm | 1.51e-08 | 3 |
body cavity | 3.83e-08 | 46 |
reproductive organ | 8.12e-08 | 48 |
body cavity or lining | 1.16e-07 | 49 |
body cavity precursor | 5.55e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.33e-16 | 22 |
germ cell cancer | 1.33e-16 | 22 |