FFCP PHASE1:Hg19::chr12:49579639..49579664,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:49579639..49579664,-
|short_description=p9@TUBA1A
|description=CAGE_peak_9_at_TUBA1A_5end
|association_with_transcript=109bp_to_AF141348_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7846 | |EntrezGene=7846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20766 | |HGNC=20766 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQM3 | |UniProt=Q9UQM3 | ||
|association_with_transcript=109bp_to_AF141348_5end | |||
|cluster_id=chr12:49579639..49579664,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_TUBA1A_5end | |||
|id=chr12:49579639..49579664,- | |||
|ontology_enrichment_celltype=CL:0000393!4.32e-08!60;CL:0000211!4.32e-08!60;CL:0000055!1.32e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.66e-10!82;UBERON:0005743!2.21e-10!86;UBERON:0000073!4.50e-09!94;UBERON:0001016!4.50e-09!94;UBERON:0000119!8.00e-09!312;UBERON:0000483!1.52e-08!309;UBERON:0002616!4.01e-08!59;UBERON:0000955!6.32e-08!69;UBERON:0006238!6.32e-08!69;UBERON:0001049!7.47e-08!57;UBERON:0005068!7.47e-08!57;UBERON:0006241!7.47e-08!57;UBERON:0007135!7.47e-08!57;UBERON:0000914!7.29e-07!83;UBERON:0002329!7.29e-07!83;UBERON:0003077!7.29e-07!83;UBERON:0003059!7.29e-07!83;UBERON:0007282!7.29e-07!83;UBERON:0009618!7.29e-07!83;UBERON:0007285!7.29e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.47e-07,81;UBERON:0001016,5.53e-07,89 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,0,0,0,0,0,0,0,0.697801167972428,0.655324116390517,0,0,0.331397375727916,2.01697543935533,0.602694528023977,2.19093027116212,0,0.984968464614303,1.22400414746552,0.626909442956176,0.572471974262113,2.6006140763848,0.753255837568817,0,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0,0.464858073811369,0.411167888021826,0,0,1.0246428261164,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0.316462387440884,0.422510572623884,0,0.419317291016752,0.561643155732475,0.300353785683013,0,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.756278537312543,1.10864698731282,0.614843499851882,0.130979075497713,0,0,0.649094787309367,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0.860234595106124,0,0,2.09749718104953,0.550236083880135,0.417989933073621,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0,1.62028389576352,0.17859945656816,0,0,0,0,0.916008719652036,0,0,0,0,0.759783069987479,0.662045904066094,0.860509862246441,0,0,0,0.74000264525148,0,0.538842688278752,0.490385709340376,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0.149448680551801,1.05691048779388,0.323745888736263,0.702254033511242,0,0.245668634623536,0,0,0.494533858557114,0,0,0.168336113954066,0.625592599359821,0,0,0.919463387397059,0.150238058906597,0.113432183160021,0.358779271377724,0,0.211931901159562,0.300091096084402,0.515262646192195,0.257640540045629,0,0.168776332241266,0.389748020644795,1.00973509697646,0.460249493211497,0,0.710019185033229,0.503760491138201,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0.265059536642971,0.348581828608555,0.518305275076852,0,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,0,0,0.686271241194102,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,1.44331342025273,0.811512834825538,0.234817388471643,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0.234004265139238,0.148631162288728,0,0.671928512795438,0.141775097242386,0,0,0,0,0.088048434013226,2.69526550203004,0.576479813667846,1.00993946741104,0.063497894292169,0,2.34434894420094,0,0.102827492703324,0.901029173531752,0,0.224262168690721,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0.799266537048298,0,0,0,0,0,1.58390374586686,0,0.871533458600294,0.299918973546171,1.2162378064119,0,0,0.239624855491583,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0.197030760201927,0.215627574859517,0.385029108839245,0.508189248444927,0,7.73288812777695,1.84267891867784,8.29320377149112,0.749007023947182,2.99161459204025,0.414415513436035,0,0.500170521059677,0,0.831883446123229,1.07057393278297,0,0.234282829985426,0,0,2.0694614258501,0,0,0.0868836144680828,0,1.71571711905428,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0.561320188866147,0.256278298511402,0,0,0,0.616838775210622,0.532685175939381,0,1.03850885836724,0.929683027679674,0.120859449591622,2.00506470303285,0.460404944679482,0.34444334449382,0,0.655622074797121,0.902399225814824,0.308061348417659,0,1.46139224653261,0.422206515571503,1.13733384070897,0.680374821106063,0,0,0,0.501689773854853,0,0,1.34324852833307,0,0,0,0.328014645699706,0.325378394664303,0,0.27470839445503,0,0,0,0,0.48335359146061,0.462145851343933,0.614014698904518,0.275673144969061,0.107420244868274,0.725083469571143,0.511359764496605,0.356128142586949,0.165284915360978,0,0,0,1.39453664789186,0.31481234683064,0,0,0.532306030317022,0,1.29726953372744,1.00187420719394,0.372158369359667,0.949138274156178,0.953150969619124,1.27948895655667,0.42793898803392,0,3.13979456079692,0.179872457583315,1.64722217841633,0.589062011728432,0.606547444719948,0,0.842516912477962,0.975267478179181,0,0,0.136499911407986,0.707027159768564,0,0,1.32687795048244,1.31535265576129,0.578775534266688,0.655894752046633,0.608731130888112,0.92947049429925,0.845086807596724,0.430234056612155,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,1.9882952955326,0.281338832821026,0,0.16480387422676,0.211125408127993,0.19924798825107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| ||
|short_description=p9@TUBA1A | |||
}} | }} |
Latest revision as of 15:48, 18 September 2015
Short description: | p9@TUBA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TUBA1A_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 109bp_to_AF141348_5end |
EntrezGene: | TUBA1A |
HGNC: | 20766 |
UniProt: | Q9UQM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.47e-07 | 81 |
nervous system | 5.53e-07 | 89 |