FFCP PHASE1:Hg19::chr8:59572175..59572210,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:59572175..59572210,- to FFCP PHASE1:Hg19::chr8:59572175..59572210,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGF5 | |UniProt=E5RGF5 | ||
|association_with_transcript=0bp_to_ENST00000518229_5end | |||
|cluster_id=chr8:59572175..59572210,- | |||
|description=CAGE_peak_5_at_NSMAF_5end | |||
|id=chr8:59572175..59572210,- | |||
|ontology_enrichment_celltype=CL:0000037!3.59e-28!172;CL:0000566!3.59e-28!172;CL:0000988!8.93e-26!182;CL:0002032!1.11e-25!165;CL:0000837!1.11e-25!165;CL:0000738!6.40e-19!140;CL:0002031!9.28e-17!124;CL:0002087!2.16e-16!119;CL:0000763!1.62e-14!112;CL:0000049!1.62e-14!112;CL:0000542!5.31e-11!53;CL:0000051!5.31e-11!53;CL:0000838!1.36e-10!52;CL:0000134!9.63e-09!358;CL:0000557!1.62e-08!71;CL:0000219!3.09e-08!390;CL:0002320!1.28e-07!365;CL:0002009!8.58e-07!65 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.93e-30,168;CL:0000988,6.19e-28,177;CL:0002032,3.65e-27,161;CL:0000837,3.65e-27,161;CL:0000738,3.06e-20,136;CL:0002031,8.65e-18,120;CL:0002087,1.83e-17,115;CL:0000763,6.97e-16,108;CL:0000049,6.97e-16,108;CL:0000542,6.28e-11,53;CL:0000051,6.28e-11,53;CL:0000838,1.62e-10,52;CL:0000557,1.55e-09,67;CL:0000134,2.30e-09,354;CL:0000219,1.27e-08,386;CL:0002320,2.85e-08,361;CL:0002009,1.10e-07,61;CL:0000839,1.67e-07,66;CL:0002194,5.32e-07,59;CL:0000576,5.32e-07,59;CL:0000040,5.32e-07,59;CL:0000559,5.32e-07,59;CL:0000766,5.51e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.43e-13!51;DOID:0060083!1.43e-13!51;DOID:1240!1.47e-13!39;DOID:8692!4.22e-11!31;DOID:162!3.10e-08!235;DOID:14566!1.01e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.45e-10;31!DOID:1240;1.98e-10;39!DOID:2531;1.04e-08;51!DOID:0060083;1.04e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.36e-13,39;DOID:2531,1.43e-13,51;DOID:0060083,1.43e-13,51;DOID:8692,3.24e-11,31;DOID:162,1.20e-07,235;DOID:14566,4.11e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-09!102;UBERON:0003061!1.50e-09!102;UBERON:0002384!1.18e-07!375;UBERON:0002193!4.15e-07!112;UBERON:0002371!8.34e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-10,98;UBERON:0003061,1.66e-10,98;UBERON:0002384,3.12e-08,371;UBERON:0002193,5.33e-08,108;UBERON:0002371,1.03e-07,76;UBERON:0001474,5.85e-07,82;UBERON:0002405,7.13e-07,93 | |||
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| ||
|short_description=p5@NSMAF | |||
}} | }} |
Latest revision as of 15:45, 18 September 2015
Short description: | p5@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NSMAF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518229_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | E5RGF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.93e-30 | 168 |
hematopoietic cell | 6.19e-28 | 177 |
hematopoietic oligopotent progenitor cell | 3.65e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.65e-27 | 161 |
leukocyte | 3.06e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 8.65e-18 | 120 |
nongranular leukocyte | 1.83e-17 | 115 |
myeloid cell | 6.97e-16 | 108 |
common myeloid progenitor | 6.97e-16 | 108 |
lymphocyte | 6.28e-11 | 53 |
common lymphoid progenitor | 6.28e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.62e-10 | 52 |
granulocyte monocyte progenitor cell | 1.55e-09 | 67 |
mesenchymal cell | 2.30e-09 | 354 |
motile cell | 1.27e-08 | 386 |
connective tissue cell | 2.85e-08 | 361 |
macrophage dendritic cell progenitor | 1.10e-07 | 61 |
myeloid lineage restricted progenitor cell | 1.67e-07 | 66 |
monopoietic cell | 5.32e-07 | 59 |
monocyte | 5.32e-07 | 59 |
monoblast | 5.32e-07 | 59 |
promonocyte | 5.32e-07 | 59 |
myeloid leukocyte | 5.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-10 | 98 |
blood island | 1.66e-10 | 98 |
connective tissue | 3.12e-08 | 371 |
hemolymphoid system | 5.33e-08 | 108 |
bone marrow | 1.03e-07 | 76 |
bone element | 5.85e-07 | 82 |
immune system | 7.13e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.36e-13 | 39 |
hematologic cancer | 1.43e-13 | 51 |
immune system cancer | 1.43e-13 | 51 |
myeloid leukemia | 3.24e-11 | 31 |
cancer | 1.20e-07 | 235 |
disease of cellular proliferation | 4.11e-07 | 239 |