FFCP PHASE1:Hg19::chr21:44493488..44493496,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=875 | |EntrezGene=875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1550 | |HGNC=1550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=121bp_to_ENST00000488526_5end | |association_with_transcript=121bp_to_ENST00000488526_5end | ||
|cluster_id=chr21:44493488..44493496,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_21_at_CBS_5end | |description=CAGE_peak_21_at_CBS_5end | ||
|id=chr21:44493488..44493496,- | |id=chr21:44493488..44493496,- | ||
|ontology_enrichment_celltype=CL:0000181!2.75e-14!12;CL:0000417!2.75e-14!12;CL:0000668!2.75e-14!12;CL:0000414!2.75e-14!12;CL:0000412!2.75e-14!12;CL:0000182!2.75e-14!12 | |ontology_enrichment_celltype=CL:0000181!2.75e-14!12;CL:0000417!2.75e-14!12;CL:0000668!2.75e-14!12;CL:0000414!2.75e-14!12;CL:0000412!2.75e-14!12;CL:0000182!2.75e-14!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.68e-10;12!CL:0002552;6.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.68e-10,12;CL:0002552,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.30e-11;11!UBERON:0009497;9.10e-10;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.86e-24!19;UBERON:0006925!4.86e-24!19;UBERON:0008836!4.86e-24!19;UBERON:0008835!8.62e-21!22;UBERON:0003894!8.62e-21!22;UBERON:0009854!6.78e-20!23;UBERON:0002368!1.53e-18!35;UBERON:0007499!2.56e-18!25;UBERON:0009497!2.56e-18!25;UBERON:0000015!2.56e-18!25;UBERON:0002423!2.56e-18!25;UBERON:0006235!2.56e-18!25;UBERON:0004161!2.56e-18!25;UBERON:0005057!1.28e-17!26;UBERON:0009856!1.28e-17!26;UBERON:0002365!8.40e-15!31;UBERON:0002330!8.40e-15!31;UBERON:0000949!2.09e-14!45;UBERON:0002530!5.87e-11!59;UBERON:0001905!2.99e-10!2;UBERON:0002757!2.99e-10!2;UBERON:0010134!2.99e-10!2;UBERON:0002784!2.99e-10!2;UBERON:0005408!2.99e-10!2;UBERON:0001899!2.99e-10!2;UBERON:0003929!1.58e-08!54;UBERON:0005172!2.26e-08!55;UBERON:0005173!2.26e-08!55;UBERON:0002417!1.50e-07!61;UBERON:0000916!1.50e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.05e-24;19!UBERON:0006925;2.05e-24;19!UBERON:0002423;1.04e-18;25!UBERON:0002365;4.77e-15;31!UBERON:0002330;4.77e-15;31!UBERON:0002368;1.16e-12;33!UBERON:0000949;3.45e-09;43!UBERON:0005172;3.54e-07;52!UBERON:0005173;3.54e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.05e-24,19;UBERON:0006925,2.05e-24,19;UBERON:0008836,2.05e-24,19;UBERON:0008835,3.56e-21,22;UBERON:0003894,3.56e-21,22;UBERON:0009854,2.78e-20,23;UBERON:0007499,1.04e-18,25;UBERON:0009497,1.04e-18,25;UBERON:0000015,1.04e-18,25;UBERON:0002423,1.04e-18,25;UBERON:0006235,1.04e-18,25;UBERON:0004161,1.04e-18,25;UBERON:0009856,5.17e-18,26;UBERON:0002365,3.35e-15,31;UBERON:0002330,3.35e-15,31;UBERON:0002368,1.58e-13,35;UBERON:0000949,1.24e-10,45;UBERON:0003929,6.15e-09,54;UBERON:0005172,6.15e-09,54;UBERON:0005173,6.15e-09,54;UBERON:0002530,3.24e-08,59;UBERON:0002417,4.37e-08,60;UBERON:0000916,4.37e-08,60 | |||
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|short_description=p21@CBS | |short_description=p21@CBS | ||
}} | }} |
Latest revision as of 15:45, 18 September 2015
Short description: | p21@CBS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CBS_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 121bp_to_ENST00000488526_5end |
EntrezGene: | CBS |
HGNC: | 1550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.68e-10 | 12 |
fibroblast of gingiva | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.05e-24 | 19 |
digestive gland | 2.05e-24 | 19 |
liver bud | 2.05e-24 | 19 |
hepatic diverticulum | 3.56e-21 | 22 |
liver primordium | 3.56e-21 | 22 |
digestive tract diverticulum | 2.78e-20 | 23 |
epithelial sac | 1.04e-18 | 25 |
epithelium of foregut-midgut junction | 1.04e-18 | 25 |
anatomical boundary | 1.04e-18 | 25 |
hepatobiliary system | 1.04e-18 | 25 |
foregut-midgut junction | 1.04e-18 | 25 |
septum transversum | 1.04e-18 | 25 |
sac | 5.17e-18 | 26 |
exocrine gland | 3.35e-15 | 31 |
exocrine system | 3.35e-15 | 31 |
endocrine gland | 1.58e-13 | 35 |
endocrine system | 1.24e-10 | 45 |
gut epithelium | 6.15e-09 | 54 |
abdomen element | 6.15e-09 | 54 |
abdominal segment element | 6.15e-09 | 54 |
gland | 3.24e-08 | 59 |
abdominal segment of trunk | 4.37e-08 | 60 |
abdomen | 4.37e-08 | 60 |