FFCP PHASE1:Hg19::chr17:1090536..1090553,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:1090536..1090553,-
|short_description=p13@ABR
|description=CAGE_peak_13_at_ABR_5end
|association_with_transcript=62bp_to_ENST00000544583,NM_001159746,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B3 | |UniProt=F5H8B3 | ||
|association_with_transcript=62bp_to_ENST00000544583,NM_001159746,uc002fse.2_5end | |||
|cluster_id=chr17:1090536..1090553,- | |||
|coexpression_cluster_id=C2393 | |||
|description=CAGE_peak_13_at_ABR_5end | |||
|id=chr17:1090536..1090553,- | |||
|ontology_enrichment_celltype=CL:0000147!1.40e-09!14;CL:0000148!9.88e-08!10;CL:0000541!9.88e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000147;2.28e-21;14!CL:0000148;1.82e-18;10!CL:0002567;2.63e-13;3!CL:0000149;2.05e-09;4!CL:0000710;1.04e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.59e-21,14;CL:0000148,9.66e-19,10;CL:0000541,9.66e-19,10;CL:0002567,2.77e-13,3;CL:0000149,2.22e-09,4;CL:0000710,7.74e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.16e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.35e-38!115;UBERON:0001049!2.78e-28!57;UBERON:0005068!2.78e-28!57;UBERON:0006241!2.78e-28!57;UBERON:0007135!2.78e-28!57;UBERON:0003075!1.10e-27!86;UBERON:0007284!1.10e-27!86;UBERON:0005743!2.67e-27!86;UBERON:0002346!1.40e-25!90;UBERON:0002616!1.12e-24!59;UBERON:0001017!5.91e-24!82;UBERON:0000073!8.76e-24!94;UBERON:0001016!8.76e-24!94;UBERON:0003080!6.53e-23!42;UBERON:0000955!3.68e-22!69;UBERON:0006238!3.68e-22!69;UBERON:0002780!4.63e-22!41;UBERON:0001890!4.63e-22!41;UBERON:0006240!4.63e-22!41;UBERON:0003056!2.20e-21!61;UBERON:0002020!1.41e-19!34;UBERON:0003528!1.41e-19!34;UBERON:0001893!1.41e-19!34;UBERON:0002791!1.64e-18!33;UBERON:0001869!4.30e-18!32;UBERON:0000033!1.43e-14!123;UBERON:0000153!2.75e-14!129;UBERON:0007811!2.75e-14!129;UBERON:0002619!4.59e-14!22;UBERON:0004121!1.71e-12!169;UBERON:0001950!3.43e-12!20;UBERON:0000924!9.25e-12!173;UBERON:0006601!9.25e-12!173;UBERON:0000956!1.05e-11!25;UBERON:0000203!1.05e-11!25;UBERON:0002308!3.63e-10!9;UBERON:0000125!3.63e-10!9;UBERON:0002298!6.47e-09!8;UBERON:0000200!2.64e-08!6;UBERON:0009663!6.84e-08!7;UBERON:0002420!9.41e-08!9;UBERON:0007245!9.41e-08!9;UBERON:0010009!9.41e-08!9;UBERON:0010011!9.41e-08!9;UBERON:0000454!9.41e-08!9;UBERON:0000025!1.01e-07!194;UBERON:0000475!3.38e-07!365;UBERON:0000119!8.12e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.91e-24;34!UBERON:0002020;2.91e-24;34!UBERON:0001893;6.88e-23;34!UBERON:0001869;6.57e-22;32!UBERON:0002619;2.82e-21;22!UBERON:0002791;5.79e-20;32!UBERON:0001950;8.61e-20;20!UBERON:0000073;2.22e-19;53!UBERON:0002616;2.22e-19;53!UBERON:0002780;2.23e-19;41!UBERON:0001890;2.23e-19;41!UBERON:0000956;1.64e-18;25!UBERON:0000203;1.64e-18;25!UBERON:0000200;4.15e-16;6!UBERON:0000988;1.07e-12;3!UBERON:0000955;1.46e-12;68!UBERON:0001870;5.26e-12;3!UBERON:0001017;8.13e-11;75!UBERON:0002298;1.13e-10;6!UBERON:0000125;2.81e-10;9!UBERON:0002308;2.81e-10;9!UBERON:0002148;7.64e-09;2!UBERON:0006331;7.64e-09;2!UBERON:0009662;7.64e-09;2!UBERON:0002702;1.06e-08;2!UBERON:0001016;4.34e-08;83!UBERON:0004733;7.69e-08;12!UBERON:0002028;7.69e-08;12!UBERON:0000966;1.32e-07;5!UBERON:0005388;1.32e-07;5!UBERON:0001802;1.32e-07;5!UBERON:0001872;2.27e-07;5!UBERON:0004732;3.28e-07;13!UBERON:0000349;3.88e-07;5!UBERON:0002680;4.07e-07;9!UBERON:0001895;4.07e-07;9!UBERON:0007023;7.28e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.77e-35,56;UBERON:0005068,1.77e-35,56;UBERON:0006241,1.77e-35,56;UBERON:0007135,1.77e-35,56;UBERON:0000073,1.05e-34,53;UBERON:0002616,1.05e-34,53;UBERON:0003075,2.95e-31,82;UBERON:0007284,2.95e-31,82;UBERON:0002346,1.75e-29,86;UBERON:0002780,4.67e-28,41;UBERON:0001890,4.67e-28,41;UBERON:0003080,4.67e-28,41;UBERON:0006240,4.67e-28,41;UBERON:0000955,6.58e-28,68;UBERON:0006238,6.58e-28,68;UBERON:0003528,1.86e-27,34;UBERON:0002020,1.86e-27,34;UBERON:0001893,1.86e-27,34;UBERON:0001869,7.36e-26,32;UBERON:0010371,4.71e-25,104;UBERON:0001017,1.44e-24,81;UBERON:0003056,3.14e-24,61;UBERON:0007023,1.61e-22,114;UBERON:0002791,1.80e-22,32;UBERON:0002619,1.15e-21,22;UBERON:0001016,1.59e-21,89;UBERON:0001950,4.24e-20,20;UBERON:0010314,1.15e-19,132;UBERON:0000956,7.45e-19,25;UBERON:0000203,7.45e-19,25;UBERON:0000200,1.91e-16,6;UBERON:0004121,2.17e-13,171;UBERON:0000924,2.17e-13,171;UBERON:0006601,2.17e-13,171;UBERON:0000988,9.81e-13,3;UBERON:0001870,5.11e-12,3;UBERON:0002298,9.58e-11,6;UBERON:0000125,3.42e-10,9;UBERON:0002308,3.42e-10,9;UBERON:0002148,7.40e-09,2;UBERON:0006331,7.40e-09,2;UBERON:0009662,7.40e-09,2;UBERON:0002702,7.69e-09,2;UBERON:0003076,1.43e-08,15;UBERON:0003057,1.43e-08,15;UBERON:0000025,1.58e-08,192;UBERON:0004733,7.91e-08,12;UBERON:0002028,7.91e-08,12;UBERON:0007277,7.91e-08,12;UBERON:0001872,1.50e-07,5;UBERON:0004732,3.37e-07,13;UBERON:0000349,3.46e-07,5;UBERON:0002680,4.51e-07,9;UBERON:0001895,4.51e-07,9;UBERON:0010092,4.51e-07,9;UBERON:0011216,4.91e-07,223 | |||
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| ||
|short_description=p13@ABR | |||
}} | }} |
Latest revision as of 15:39, 18 September 2015
Short description: | p13@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ABR_5end |
Coexpression cluster: | C2393_Melanocyte_pons_occipital_postcentral_parietal_paracentral_medulla |
Association with transcript: | 62bp_to_ENST00000544583, NM_001159746, uc002fse.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | F5H8B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.59e-21 | 14 |
melanocyte | 9.66e-19 | 10 |
melanoblast | 9.66e-19 | 10 |
light melanocyte | 2.77e-13 | 3 |
visual pigment cell | 2.22e-09 | 4 |
neurecto-epithelial cell | 7.74e-09 | 20 |