FFCP PHASE1:Hg19::chr11:60929074..60929172,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:60929074..60929172,-
|short_description=p2@VPS37C
|description=CAGE_peak_2_at_VPS37C_5end
|association_with_transcript=0bp_to_ENST00000301765,ENST00000535...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55048 | |EntrezGene=55048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26097 | |HGNC=26097 | ||
|TSSclassifier=strong | |||
|UniProt=A5D8V6 | |UniProt=A5D8V6 | ||
|association_with_transcript=0bp_to_ENST00000301765,ENST00000535818_5end | |||
|cluster_id=chr11:60929074..60929172,- | |||
|description=CAGE_peak_2_at_VPS37C_5end | |||
|id=chr11:60929074..60929172,- | |||
|ontology_enrichment_celltype=CL:0000115!1.81e-15!35;CL:0002078!7.30e-15!44;CL:0002057!5.24e-14!42;CL:0002194!4.68e-13!63;CL:0000576!4.68e-13!63;CL:0000040!4.68e-13!63;CL:0000559!4.68e-13!63;CL:0000860!2.08e-12!45;CL:0000766!2.47e-12!76;CL:0002009!6.15e-12!65;CL:0000839!1.63e-11!70;CL:0000557!2.97e-11!71;CL:0002139!1.88e-10!24;CL:0000213!6.47e-10!57;CL:0000215!6.47e-10!57;CL:0000222!4.65e-08!119;CL:0000071!8.78e-08!18;CL:0002546!8.78e-08!18;CL:0000066!2.48e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.42e-13;36!CL:0000860;1.65e-12;33!CL:0002057;1.65e-12;33!CL:0000473;6.93e-12;39!CL:0000234;6.93e-12;39!CL:0002078;2.98e-10;45!CL:0002139;3.12e-10;24!CL:0000576;7.99e-10;48!CL:0000071;1.23e-07;18!CL:0000766;1.88e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.41e-15,36;CL:0000473,3.15e-15,48;CL:0000234,3.15e-15,48;CL:0002078,5.28e-15,45;CL:0002194,1.82e-14,59;CL:0000576,1.82e-14,59;CL:0000040,1.82e-14,59;CL:0000559,1.82e-14,59;CL:0000860,5.23e-14,42;CL:0002057,5.23e-14,42;CL:0000766,1.73e-13,72;CL:0002009,3.27e-13,61;CL:0000839,1.11e-12,66;CL:0000557,2.20e-12,67;CL:0002139,1.88e-10,24;CL:0000213,4.44e-10,58;CL:0000215,4.44e-10,58;CL:0000222,2.58e-08,121;CL:0000071,8.78e-08,18;CL:0002546,8.78e-08,18;CL:0000066,3.17e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;3.64e-11;42!CL:0002546;1.23e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.42e-20!659;UBERON:0000467!3.97e-20!625;UBERON:0000480!7.76e-20!626;UBERON:0003081!1.19e-19!216;UBERON:0000922!1.11e-17!612;UBERON:0002050!1.52e-17!605;UBERON:0005423!1.52e-17!605;UBERON:0000923!2.08e-17!604;UBERON:0005291!2.08e-17!604;UBERON:0006598!2.08e-17!604;UBERON:0002532!2.08e-17!604;UBERON:0000926!1.44e-15!448;UBERON:0004120!1.44e-15!448;UBERON:0006603!1.44e-15!448;UBERON:0000062!3.66e-10!511;UBERON:0002371!6.29e-10!80;UBERON:0002193!1.44e-09!112;UBERON:0000055!7.72e-09!69;UBERON:0001474!8.13e-09!86;UBERON:0002405!8.47e-09!115;UBERON:0002049!1.30e-08!79;UBERON:0007798!1.30e-08!79;UBERON:0004535!3.03e-08!110;UBERON:0001009!3.09e-08!113;UBERON:0003914!3.21e-08!118;UBERON:0000119!7.53e-08!312;UBERON:0001986!8.78e-08!18;UBERON:0004638!8.78e-08!18;UBERON:0004852!8.78e-08!18;UBERON:0002390!1.24e-07!102;UBERON:0003061!1.24e-07!102;UBERON:0000483!1.38e-07!309;UBERON:0004765!1.49e-07!101;UBERON:0001434!1.49e-07!101;UBERON:0004111!2.22e-07!241;UBERON:0004872!3.40e-07!84;UBERON:0002204!7.98e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.23e-07;18!UBERON:0001986;1.23e-07;18!UBERON:0004852;1.23e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,9.17e-19,203;UBERON:0000922,2.49e-18,592;UBERON:0005423,7.07e-18,581;UBERON:0000926,1.45e-16,315;UBERON:0004120,1.45e-16,315;UBERON:0006603,1.45e-16,315;UBERON:0000923,5.93e-16,560;UBERON:0010316,5.93e-16,560;UBERON:0005291,5.93e-16,560;UBERON:0006598,5.93e-16,560;UBERON:0010317,5.93e-16,560;UBERON:0002532,5.93e-16,560;UBERON:0002050,6.64e-16,564;UBERON:0002371,7.16e-11,76;UBERON:0002405,8.69e-11,93;UBERON:0002193,2.82e-10,108;UBERON:0001474,1.26e-09,82;UBERON:0000055,6.66e-09,68;UBERON:0002049,1.16e-08,78;UBERON:0007798,1.16e-08,78;UBERON:0004535,2.85e-08,109;UBERON:0002390,2.89e-08,98;UBERON:0003061,2.89e-08,98;UBERON:0001009,2.91e-08,112;UBERON:0003914,4.26e-08,117;UBERON:0004765,8.59e-08,90;UBERON:0004638,8.78e-08,18;UBERON:0001986,8.78e-08,18;UBERON:0004852,8.78e-08,18;UBERON:0001434,1.14e-07,100;UBERON:0004872,3.14e-07,83;UBERON:0004111,4.27e-07,240;UBERON:0002204,5.33e-07,167;UBERON:0000119,6.36e-07,309 | |||
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| ||
|short_description=p2@VPS37C | |||
}} | }} |
Latest revision as of 15:15, 18 September 2015
Short description: | p2@VPS37C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VPS37C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301765, ENST00000535818_5end |
EntrezGene: | VPS37C |
HGNC: | 26097 |
UniProt: | A5D8V6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.41e-15 | 36 |
defensive cell | 3.15e-15 | 48 |
phagocyte | 3.15e-15 | 48 |
meso-epithelial cell | 5.28e-15 | 45 |
monopoietic cell | 1.82e-14 | 59 |
monocyte | 1.82e-14 | 59 |
monoblast | 1.82e-14 | 59 |
promonocyte | 1.82e-14 | 59 |
classical monocyte | 5.23e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.23e-14 | 42 |
myeloid leukocyte | 1.73e-13 | 72 |
macrophage dendritic cell progenitor | 3.27e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-12 | 66 |
granulocyte monocyte progenitor cell | 2.20e-12 | 67 |
endothelial cell of vascular tree | 1.88e-10 | 24 |
lining cell | 4.44e-10 | 58 |
barrier cell | 4.44e-10 | 58 |
mesodermal cell | 2.58e-08 | 121 |
blood vessel endothelial cell | 8.78e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.78e-08 | 18 |
epithelial cell | 3.17e-07 | 253 |