FFCP PHASE1:Hg19::chr15:65398647..65398656,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390595 | |EntrezGene=390595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=40028 | |HGNC=40028 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYI3 | |UniProt=F5GYI3 | ||
|association_with_transcript=40bp_to_ENST00000502113,NM_001163692_5end | |association_with_transcript=40bp_to_ENST00000502113,NM_001163692_5end | ||
|cluster_id=chr15:65398647..65398656,- | |||
|coexpression_cluster_id=C357 | |coexpression_cluster_id=C357 | ||
|description=CAGE_peak_3_at_UBAP1L_5end | |description=CAGE_peak_3_at_UBAP1L_5end | ||
|id=chr15:65398647..65398656,- | |id=chr15:65398647..65398656,- | ||
|ontology_enrichment_celltype=CL:0002139!2.20e-27!24;CL:0000071!2.16e-22!18;CL:0002546!2.16e-22!18;CL:0000115!2.24e-18!35;CL:0002078!2.38e-14!44;CL:0002144!1.29e-12!3;CL:0000213!8.94e-11!57;CL:0000215!8.94e-11!57;CL:1000413!4.20e-09!9 | |ontology_enrichment_celltype=CL:0002139!2.20e-27!24;CL:0000071!2.16e-22!18;CL:0002546!2.16e-22!18;CL:0000115!2.24e-18!35;CL:0002078!2.38e-14!44;CL:0002144!1.29e-12!3;CL:0000213!8.94e-11!57;CL:0000215!8.94e-11!57;CL:1000413!4.20e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0002144;5.96e-34;3!CL:0000071;3.88e-23;18!CL:0002544;7.67e-18;6!CL:0002139;1.03e-17;24!CL:1000413;2.19e-12;9!CL:0000115;1.70e-11;36!CL:0002078;8.91e-10;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.96e-34,3;CL:0000071,3.88e-23,18;CL:0002546,3.88e-23,18;CL:0002544,7.67e-18,6;CL:0002139,1.03e-17,24;CL:1000413,2.19e-12,9;CL:0000115,2.91e-12,36;CL:0002078,4.55e-10,45;CL:0000213,4.33e-08,58;CL:0000215,4.33e-08,58;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;3.88e-23;18 | |||
|ontology_enrichment_disease=DOID:6193!1.62e-09!1 | |ontology_enrichment_disease=DOID:6193!1.62e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.16e-22!18;UBERON:0004638!2.16e-22!18;UBERON:0004852!2.16e-22!18;UBERON:0000487!3.43e-18!22;UBERON:0000341!6.27e-18!2;UBERON:0006914!6.41e-16!25;UBERON:0001915!1.29e-12!3;UBERON:0001982!1.29e-12!3;UBERON:0001301!1.48e-09!1;UBERON:0006834!1.91e-09!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0003915!4.20e-09!9;UBERON:0004700!4.20e-09!9;UBERON:0001917!4.20e-09!9;UBERON:0000055!1.14e-08!69;UBERON:0002046!1.61e-07!5;UBERON:0004117!1.61e-07!5;UBERON:0007689!1.61e-07!5;UBERON:0007123!1.61e-07!5;UBERON:0003091!1.61e-07!5;UBERON:0002049!2.10e-07!79;UBERON:0007798!2.10e-07!79 | |ontology_enrichment_uberon=UBERON:0001986!2.16e-22!18;UBERON:0004638!2.16e-22!18;UBERON:0004852!2.16e-22!18;UBERON:0000487!3.43e-18!22;UBERON:0000341!6.27e-18!2;UBERON:0006914!6.41e-16!25;UBERON:0001915!1.29e-12!3;UBERON:0001982!1.29e-12!3;UBERON:0001301!1.48e-09!1;UBERON:0006834!1.91e-09!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0003915!4.20e-09!9;UBERON:0004700!4.20e-09!9;UBERON:0001917!4.20e-09!9;UBERON:0000055!1.14e-08!69;UBERON:0002046!1.61e-07!5;UBERON:0004117!1.61e-07!5;UBERON:0007689!1.61e-07!5;UBERON:0007123!1.61e-07!5;UBERON:0003091!1.61e-07!5;UBERON:0002049!2.10e-07!79;UBERON:0007798!2.10e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.96e-34;3!UBERON:0001915;5.96e-34;3!UBERON:0001982;5.96e-34;3!UBERON:0004638;3.88e-23;18!UBERON:0001986;3.88e-23;18!UBERON:0004852;3.88e-23;18!UBERON:0000487;3.41e-19;22!UBERON:0006914;4.64e-17;25!UBERON:0000490;4.27e-13;33!UBERON:0003915;2.19e-12;9!UBERON:0004700;2.19e-12;9!UBERON:0001917;2.19e-12;9!UBERON:0003914;3.70e-09;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.96e-34,3;UBERON:0001915,5.96e-34,3;UBERON:0001982,5.96e-34,3;UBERON:0004638,3.88e-23,18;UBERON:0001986,3.88e-23,18;UBERON:0004852,3.88e-23,18;UBERON:0000487,3.41e-19,22;UBERON:0006914,4.64e-17,25;UBERON:0003915,2.19e-12,9;UBERON:0004700,2.19e-12,9;UBERON:0001917,2.19e-12,9;UBERON:0007500,5.66e-08,59;UBERON:0001981,5.66e-08,59;UBERON:0004537,5.66e-08,59;UBERON:0006965,5.66e-08,59;UBERON:0000055,4.47e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,2.08284300964557,0,0,0.275118041940067,0,0,0,0,0.805658634218294,0,1.95249646038536,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,2.08284300964557,0,0,0.275118041940067,0,0,0,0,0.805658634218294,0,1.95249646038536,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@UBAP1L | |short_description=p3@UBAP1L | ||
}} | }} |
Latest revision as of 14:45, 18 September 2015
Short description: | p3@UBAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBAP1L_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 40bp_to_ENST00000502113, NM_001163692_5end |
EntrezGene: | UBAP1L |
HGNC: | 40028 |
UniProt: | F5GYI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.96e-34 | 3 |
blood vessel endothelial cell | 3.88e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.88e-23 | 18 |
aortic endothelial cell | 7.67e-18 | 6 |
endothelial cell of vascular tree | 1.03e-17 | 24 |
endothelial cell of artery | 2.19e-12 | 9 |
endothelial cell | 2.91e-12 | 36 |
meso-epithelial cell | 4.55e-10 | 45 |
lining cell | 4.33e-08 | 58 |
barrier cell | 4.33e-08 | 58 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.96e-34 | 3 |
endothelium of capillary | 5.96e-34 | 3 |
capillary | 5.96e-34 | 3 |
blood vessel endothelium | 3.88e-23 | 18 |
endothelium | 3.88e-23 | 18 |
cardiovascular system endothelium | 3.88e-23 | 18 |
simple squamous epithelium | 3.41e-19 | 22 |
squamous epithelium | 4.64e-17 | 25 |
endothelial tube | 2.19e-12 | 9 |
arterial system endothelium | 2.19e-12 | 9 |
endothelium of artery | 2.19e-12 | 9 |
epithelial tube open at both ends | 5.66e-08 | 59 |
blood vessel | 5.66e-08 | 59 |
blood vasculature | 5.66e-08 | 59 |
vascular cord | 5.66e-08 | 59 |
vessel | 4.47e-07 | 68 |