FFCP PHASE1:Hg19::chr1:54665832..54665877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51253 | |EntrezGene=51253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14034 | |HGNC=14034 | ||
|TSSclassifier=strong | |||
|UniProt=E9PB99,Q9BZE1 | |UniProt=E9PB99,Q9BZE1 | ||
|association_with_transcript=0bp_to_ENST00000329505,ENST00000360840,ENST00000490670,NM_016491,uc001cxa.3,uc001cxb.1,uc001cxc.3,uc009vzp.2,uc010oob.1_5end | |association_with_transcript=0bp_to_ENST00000329505,ENST00000360840,ENST00000490670,NM_016491,uc001cxa.3,uc001cxb.1,uc001cxc.3,uc009vzp.2,uc010oob.1_5end | ||
|cluster_id=chr1:54665832..54665877,+ | |||
|coexpression_cluster_id=C685 | |||
|description=CAGE_peak_1_at_MRPL37_5end | |description=CAGE_peak_1_at_MRPL37_5end | ||
|id=chr1:54665832..54665877,+ | |id=chr1:54665832..54665877,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.30e-32!679;CL:0000004!1.30e-32!679;CL:0000255!1.30e-32!679;CL:0000012!2.48e-32!682;CL:0000066!2.07e-24!254;CL:0002321!3.93e-20!248;CL:0000220!8.99e-20!246;CL:0000144!1.01e-18!625;CL:0000003!1.45e-17!722;CL:0000055!6.72e-16!180;CL:0002371!2.69e-14!591;CL:0000222!4.69e-14!119;CL:0000063!4.67e-11!578;CL:0000183!1.27e-09!59;CL:0000076!1.45e-08!62;CL:0000187!3.46e-08!54;CL:0000680!4.62e-08!57;CL:0000056!4.62e-08!57;CL:0000355!4.62e-08!57;CL:0000192!1.63e-07!42;CL:0000514!1.63e-07!42;CL:0000393!5.01e-07!60;CL:0000211!5.01e-07!60 | |ontology_enrichment_celltype=CL:0000548!1.30e-32!679;CL:0000004!1.30e-32!679;CL:0000255!1.30e-32!679;CL:0000012!2.48e-32!682;CL:0000066!2.07e-24!254;CL:0002321!3.93e-20!248;CL:0000220!8.99e-20!246;CL:0000144!1.01e-18!625;CL:0000003!1.45e-17!722;CL:0000055!6.72e-16!180;CL:0002371!2.69e-14!591;CL:0000222!4.69e-14!119;CL:0000063!4.67e-11!578;CL:0000183!1.27e-09!59;CL:0000076!1.45e-08!62;CL:0000187!3.46e-08!54;CL:0000680!4.62e-08!57;CL:0000056!4.62e-08!57;CL:0000355!4.62e-08!57;CL:0000192!1.63e-07!42;CL:0000514!1.63e-07!42;CL:0000393!5.01e-07!60;CL:0000211!5.01e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.65e-24,253;CL:0002321,6.94e-20,250;CL:0000222,1.03e-13,121;CL:0000076,9.50e-09,63;CL:0000187,4.96e-08,55;CL:0000680,6.48e-08,58;CL:0000056,6.48e-08,58;CL:0000355,6.48e-08,58;CL:0000192,2.46e-07,43;CL:0000514,2.46e-07,43;CL:0000393,6.63e-07,61;CL:0000211,6.63e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.65e-14!239;DOID:162!4.31e-14!235;DOID:305!6.52e-09!106;DOID:0050687!1.60e-07!143;DOID:0050686!2.04e-07!137;DOID:2531!5.45e-07!51;DOID:0060083!5.45e-07!51 | |ontology_enrichment_disease=DOID:14566!2.65e-14!239;DOID:162!4.31e-14!235;DOID:305!6.52e-09!106;DOID:0050687!1.60e-07!143;DOID:0050686!2.04e-07!137;DOID:2531!5.45e-07!51;DOID:0060083!5.45e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.65e-14,239;DOID:162,4.31e-14,235;DOID:305,6.52e-09,106;DOID:0050687,1.60e-07,143;DOID:0050686,2.04e-07,137;DOID:2531,5.45e-07,51;DOID:0060083,5.45e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.31e-12!238;UBERON:0009142!1.31e-12!238;UBERON:0002100!1.48e-10!216;UBERON:0003914!3.40e-10!118;UBERON:0000490!5.96e-10!138;UBERON:0005256!9.27e-10!143;UBERON:0004290!5.97e-09!70;UBERON:0000486!6.75e-09!82;UBERON:0009569!5.71e-08!113;UBERON:0002049!6.04e-08!79;UBERON:0007798!6.04e-08!79;UBERON:0000914!6.10e-08!83;UBERON:0002329!6.10e-08!83;UBERON:0003077!6.10e-08!83;UBERON:0003059!6.10e-08!83;UBERON:0007282!6.10e-08!83;UBERON:0009618!6.10e-08!83;UBERON:0007285!6.10e-08!83;UBERON:0001134!1.26e-07!61;UBERON:0002036!1.26e-07!61;UBERON:0003082!1.26e-07!61;UBERON:0000055!2.00e-07!69;UBERON:0001981!2.97e-07!60;UBERON:0007500!2.97e-07!60;UBERON:0004537!2.97e-07!60;UBERON:0006965!2.97e-07!60;UBERON:0001637!5.00e-07!42;UBERON:0003509!5.00e-07!42;UBERON:0004572!5.00e-07!42;UBERON:0002385!7.14e-07!63;UBERON:0001015!7.14e-07!63;UBERON:0000383!7.14e-07!63;UBERON:0000072!7.28e-07!46 | |ontology_enrichment_uberon=UBERON:0003104!1.31e-12!238;UBERON:0009142!1.31e-12!238;UBERON:0002100!1.48e-10!216;UBERON:0003914!3.40e-10!118;UBERON:0000490!5.96e-10!138;UBERON:0005256!9.27e-10!143;UBERON:0004290!5.97e-09!70;UBERON:0000486!6.75e-09!82;UBERON:0009569!5.71e-08!113;UBERON:0002049!6.04e-08!79;UBERON:0007798!6.04e-08!79;UBERON:0000914!6.10e-08!83;UBERON:0002329!6.10e-08!83;UBERON:0003077!6.10e-08!83;UBERON:0003059!6.10e-08!83;UBERON:0007282!6.10e-08!83;UBERON:0009618!6.10e-08!83;UBERON:0007285!6.10e-08!83;UBERON:0001134!1.26e-07!61;UBERON:0002036!1.26e-07!61;UBERON:0003082!1.26e-07!61;UBERON:0000055!2.00e-07!69;UBERON:0001981!2.97e-07!60;UBERON:0007500!2.97e-07!60;UBERON:0004537!2.97e-07!60;UBERON:0006965!2.97e-07!60;UBERON:0001637!5.00e-07!42;UBERON:0003509!5.00e-07!42;UBERON:0004572!5.00e-07!42;UBERON:0002385!7.14e-07!63;UBERON:0001015!7.14e-07!63;UBERON:0000383!7.14e-07!63;UBERON:0000072!7.28e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.24e-07;37 | |||
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62848982867 | ||
|short_description=p1@MRPL37 | |short_description=p1@MRPL37 | ||
}} | }} |
Latest revision as of 14:35, 18 September 2015
Short description: | p1@MRPL37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL37_5end |
Coexpression cluster: | C685_Alveolar_Mesenchymal_Renal_Smooth_Hepatic_Fibroblast_Keratocytes |
Association with transcript: | 0bp_to_ENST00000329505, ENST00000360840, ENST00000490670, NM_016491, uc001cxa.3, uc001cxb.1, uc001cxc.3, uc009vzp.2, uc010oob.1_5end |
EntrezGene: | MRPL37 |
HGNC: | 14034 |
UniProt: | E9PB99Q9BZE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.65e-24 | 253 |
embryonic cell | 6.94e-20 | 250 |
mesodermal cell | 1.03e-13 | 121 |
squamous epithelial cell | 9.50e-09 | 63 |
muscle cell | 4.96e-08 | 55 |
muscle precursor cell | 6.48e-08 | 58 |
myoblast | 6.48e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.48e-08 | 58 |
smooth muscle cell | 2.46e-07 | 43 |
smooth muscle myoblast | 2.46e-07 | 43 |
electrically responsive cell | 6.63e-07 | 61 |
electrically active cell | 6.63e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 8.03e-12 | 199 |
unilaminar epithelium | 3.46e-11 | 148 |
epithelial vesicle | 1.41e-10 | 78 |
epithelial tube | 2.71e-10 | 117 |
mesenchyme | 3.45e-10 | 160 |
entire embryonic mesenchyme | 3.45e-10 | 160 |
somite | 8.18e-09 | 71 |
presomitic mesoderm | 8.18e-09 | 71 |
presumptive segmental plate | 8.18e-09 | 71 |
dermomyotome | 8.18e-09 | 71 |
trunk paraxial mesoderm | 8.18e-09 | 71 |
multilaminar epithelium | 8.85e-09 | 83 |
trunk mesenchyme | 1.77e-08 | 122 |
paraxial mesoderm | 2.29e-08 | 72 |
presumptive paraxial mesoderm | 2.29e-08 | 72 |
vasculature | 3.04e-08 | 78 |
vascular system | 3.04e-08 | 78 |
dense mesenchyme tissue | 3.50e-08 | 73 |
subdivision of trunk | 8.27e-08 | 112 |
vessel | 9.80e-08 | 68 |
epithelial tube open at both ends | 1.38e-07 | 59 |
blood vessel | 1.38e-07 | 59 |
blood vasculature | 1.38e-07 | 59 |
vascular cord | 1.38e-07 | 59 |
skeletal muscle tissue | 1.71e-07 | 62 |
striated muscle tissue | 1.71e-07 | 62 |
myotome | 1.71e-07 | 62 |
artery | 5.00e-07 | 42 |
arterial blood vessel | 5.00e-07 | 42 |
arterial system | 5.00e-07 | 42 |
splanchnic layer of lateral plate mesoderm | 6.20e-07 | 83 |
muscle tissue | 9.28e-07 | 64 |
musculature | 9.28e-07 | 64 |
musculature of body | 9.28e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.65e-14 | 239 |
cancer | 4.31e-14 | 235 |
carcinoma | 6.52e-09 | 106 |
cell type cancer | 1.60e-07 | 143 |
organ system cancer | 2.04e-07 | 137 |
hematologic cancer | 5.45e-07 | 51 |
immune system cancer | 5.45e-07 | 51 |