FFCP PHASE1:Hg19::chr4:74609057..74609079,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:74609057..74609079,+
|short_description=p8@IL8
|description=CAGE_peak_8_at_IL8_5end
|association_with_transcript=202bp_to_AJ227913_5end
|EntrezGene=3576
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3576 | |EntrezGene=3576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6025 | |HGNC=6025 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=202bp_to_AJ227913_5end | |||
|cluster_id=chr4:74609057..74609079,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_IL8_5end | |||
|id=chr4:74609057..74609079,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.75e-41!42;CL:0000860!2.00e-37!45;CL:0000766!8.30e-33!76;CL:0002009!1.59e-26!65;CL:0002194!4.26e-26!63;CL:0000576!4.26e-26!63;CL:0000040!4.26e-26!63;CL:0000559!4.26e-26!63;CL:0000557!2.75e-23!71;CL:0000839!2.43e-22!70;CL:0000763!7.67e-21!112;CL:0000049!7.67e-21!112;CL:0000359!1.03e-19!32;CL:0000738!2.07e-18!140;CL:0002087!3.03e-14!119;CL:0000094!9.41e-14!8;CL:0000037!1.45e-13!172;CL:0000566!1.45e-13!172;CL:0000048!1.46e-13!430;CL:0000192!2.06e-13!42;CL:0000514!2.06e-13!42;CL:0000723!5.10e-13!436;CL:0000034!6.42e-13!444;CL:0002032!1.99e-12!165;CL:0000837!1.99e-12!165;CL:0000988!5.22e-12!182;CL:0002031!1.76e-11!124;CL:0000187!3.95e-10!54;CL:0000081!1.76e-09!11;CL:0000680!2.90e-09!57;CL:0000056!2.90e-09!57;CL:0000355!2.90e-09!57;CL:0000012!4.37e-09!682;CL:0000183!9.70e-09!59;CL:0000548!1.10e-08!679;CL:0000004!1.10e-08!679;CL:0000255!1.10e-08!679;CL:0002595!1.20e-08!5;CL:0000393!1.72e-08!60;CL:0000211!1.72e-08!60;CL:0002371!6.36e-08!591;CL:0002539!3.05e-07!10;CL:0000224!5.75e-07!4;CL:0000144!7.25e-07!625;CL:0002594!7.41e-07!4;CL:0000003!8.19e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-49;33!CL:0002057;1.34e-49;33!CL:0000473;9.28e-37;39!CL:0000234;9.28e-37;39!CL:0000576;1.69e-27;48!CL:0000766;2.31e-25;69!CL:0000094;2.03e-21;8!CL:0002595;1.49e-16;5!CL:0000359;2.97e-16;32!CL:0000081;2.67e-15;11!CL:0000775;1.30e-11;3!CL:0000763;1.81e-11;100!CL:0000771;7.77e-09;2!CL:0000192;1.40e-08;43!CL:0002589;3.35e-08;2!CL:0002087;4.29e-08;104!CL:0002593;1.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.17e-54,42;CL:0002057,5.17e-54,42;CL:0000766,1.21e-50,72;CL:0000473,3.62e-50,48;CL:0000234,3.62e-50,48;CL:0002194,1.08e-38,59;CL:0000576,1.08e-38,59;CL:0000040,1.08e-38,59;CL:0000559,1.08e-38,59;CL:0002009,3.27e-37,61;CL:0000839,6.71e-34,66;CL:0000557,2.69e-33,67;CL:0000763,4.83e-31,108;CL:0000049,4.83e-31,108;CL:0000738,1.41e-24,136;CL:0000094,2.24e-21,8;CL:0000037,2.83e-18,168;CL:0002087,4.22e-18,115;CL:0002032,4.35e-18,161;CL:0000837,4.35e-18,161;CL:0000359,7.61e-18,32;CL:0000988,6.48e-17,177;CL:0002595,1.75e-16,5;CL:0002031,1.19e-15,120;CL:0000081,2.86e-15,11;CL:0000034,9.69e-13,441;CL:0000048,1.03e-12,427;CL:0000192,1.79e-12,43;CL:0000514,1.79e-12,43;CL:0000723,2.22e-12,433;CL:0000775,1.19e-11,3;CL:0000187,1.49e-10,55;CL:0000680,7.75e-10,58;CL:0000056,7.75e-10,58;CL:0000355,7.75e-10,58;CL:0000393,3.41e-09,61;CL:0000211,3.41e-09,61;CL:0000771,7.63e-09,2;CL:0002589,3.23e-08,2;CL:0002593,1.33e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.53e-40;42!CL:0000514;1.40e-08;43!CL:0000049;2.49e-07;108 | |||
|ontology_enrichment_disease=DOID:193!9.28e-08!29;DOID:120!2.43e-07!27;DOID:2394!3.57e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.76e-21!167;UBERON:0002371!2.30e-19!80;UBERON:0003081!4.23e-18!216;UBERON:0001474!3.19e-17!86;UBERON:0002390!9.61e-16!102;UBERON:0003061!9.61e-16!102;UBERON:0002193!3.83e-15!112;UBERON:0001637!9.62e-15!42;UBERON:0003509!9.62e-15!42;UBERON:0004572!9.62e-15!42;UBERON:0004765!7.10e-14!101;UBERON:0001434!7.10e-14!101;UBERON:0002405!1.68e-12!115;UBERON:0004573!5.12e-12!33;UBERON:0004571!5.12e-12!33;UBERON:0001981!2.27e-11!60;UBERON:0007500!2.27e-11!60;UBERON:0004537!2.27e-11!60;UBERON:0006965!2.27e-11!60;UBERON:0000055!7.85e-11!69;UBERON:0003834!1.20e-08!5;UBERON:0001533!1.20e-08!5;UBERON:0002049!1.65e-08!79;UBERON:0007798!1.65e-08!79;UBERON:0001134!2.98e-08!61;UBERON:0002036!2.98e-08!61;UBERON:0003082!2.98e-08!61;UBERON:0004872!4.16e-08!84;UBERON:0002385!8.44e-08!63;UBERON:0001015!8.44e-08!63;UBERON:0000383!8.44e-08!63;UBERON:0004535!1.86e-07!110;UBERON:0000926!1.94e-07!448;UBERON:0004120!1.94e-07!448;UBERON:0006603!1.94e-07!448;UBERON:0004237!3.05e-07!10;UBERON:0004695!3.05e-07!10;UBERON:0002111!3.05e-07!10;UBERON:0004178!3.05e-07!10;UBERON:0001009!4.83e-07!113;UBERON:0001310!7.41e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.49e-16;5!UBERON:0001533;1.49e-16;5!UBERON:0003513;9.24e-12;7!UBERON:0004573;3.64e-11;33!UBERON:0004571;3.64e-11;33!UBERON:0001637;7.41e-09;42!UBERON:0003509;7.41e-09;42!UBERON:0004572;7.41e-09;42!UBERON:0001529;3.35e-08;2!UBERON:0007204;3.35e-08;2!UBERON:0002456;1.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-28,76;UBERON:0002204,2.07e-28,167;UBERON:0001474,5.41e-26,82;UBERON:0003081,2.07e-24,203;UBERON:0004765,4.34e-23,90;UBERON:0002390,1.92e-22,98;UBERON:0003061,1.92e-22,98;UBERON:0002405,3.97e-22,93;UBERON:0001434,4.13e-20,100;UBERON:0002193,1.01e-19,108;UBERON:0003834,1.75e-16,5;UBERON:0001533,1.75e-16,5;UBERON:0000926,6.83e-14,315;UBERON:0004120,6.83e-14,315;UBERON:0006603,6.83e-14,315;UBERON:0001637,7.63e-13,42;UBERON:0003509,7.63e-13,42;UBERON:0004572,7.63e-13,42;UBERON:0004573,2.56e-12,33;UBERON:0004571,2.56e-12,33;UBERON:0003513,1.03e-11,7;UBERON:0007500,3.97e-11,59;UBERON:0001981,3.97e-11,59;UBERON:0004537,3.97e-11,59;UBERON:0006965,3.97e-11,59;UBERON:0000055,3.47e-09,68;UBERON:0001134,5.41e-09,62;UBERON:0002036,5.41e-09,62;UBERON:0003082,5.41e-09,62;UBERON:0002385,1.30e-08,64;UBERON:0001015,1.30e-08,64;UBERON:0000383,1.30e-08,64;UBERON:0001529,3.23e-08,2;UBERON:0007204,3.23e-08,2;UBERON:0002456,1.33e-07,2;UBERON:0002049,1.44e-07,78;UBERON:0007798,1.44e-07,78;UBERON:0002329,1.88e-07,71;UBERON:0003059,1.88e-07,71;UBERON:0007282,1.88e-07,71;UBERON:0004290,1.88e-07,71;UBERON:0009618,1.88e-07,71;UBERON:0003077,2.63e-07,72;UBERON:0007285,2.63e-07,72;UBERON:0007524,3.65e-07,73;UBERON:0004872,6.51e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,1.39334510984468,0,0,0,0,0,0,7.75593571944628,14.4392002178502,11.718587018656,0,0,0,0.581592955118259,0,0.970336244751265,6.97287110717054,4.93401465626191,6.81354015969228,12.3707728698525,4.86705342405291,9.69577142543199,46.5406668994435,20.0100251910986,12.1883837934908,1.50593871634084,0.545812300115692,3.59557575112135,30.3023053447194,16.6883094079569,40.2782389253396,0.329851300186716,0.398927315243264,0.426224750532694,28.4405053856012,56.1711372444228,42.3519129316991,1.00499466102697,2.08593167368081,1.95469960234605,12.7133895553007,17.6773265274031,39.5577984301106,0,0.212604299965044,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0,0,0,0,0.112611480483322,0,0,0,14.495845917967,34.9002237733493,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,1.42636905040718,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,7.49007023947182,2.99161459204025,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.15714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,1.03850885836724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3940745403212,0.924100740528266,0.532306030317022,1.73986598415015,2.7798632865588,5.43874569619567,0,0,0,0,0,0,0.78494864019923,0,0,0,0.808729926293264,3.17020642346017,3.37006764991185,0,1.70599442741899,1.05650146756755,0,0,0,1.10273068709225,1.32687795048244,1.75380354101505,0,0,3.85529716229138,0.30982349809975,0.281695602532241,0,0,3.92338156629375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,2.15361907373044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.477890301491107,1.79921244865442,0.310525913752519,0.414706207840855,0,0.521745061811734,0.300515217994437,0,0,0.363697318405119,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60698544745092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,1.39334510984468,0,0,0,0,0,0,7.75593571944628,14.4392002178502,11.718587018656,0,0,0,0.581592955118259,0,0.970336244751265,6.97287110717054,4.93401465626191,6.81354015969228,12.3707728698525,4.86705342405291,9.69577142543199,46.5406668994435,20.0100251910986,12.1883837934908,1.50593871634084,0.545812300115692,3.59557575112135,30.3023053447194,16.6883094079569,40.2782389253396,0.329851300186716,0.398927315243264,0.426224750532694,28.4405053856012,56.1711372444228,42.3519129316991,1.00499466102697,2.08593167368081,1.95469960234605,12.7133895553007,17.6773265274031,39.5577984301106,0,0.212604299965044,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0,0,0,0,0.112611480483322,0,0,0,14.495845917967,34.9002237733493,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,1.42636905040718,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,7.49007023947182,2.99161459204025,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.15714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,1.03850885836724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3940745403212,0.924100740528266,0.532306030317022,1.73986598415015,2.7798632865588,5.43874569619567,0,0,0,0,0,0,0.78494864019923,0,0,0,0.808729926293264,3.17020642346017,3.37006764991185,0,1.70599442741899,1.05650146756755,0,0,0,1.10273068709225,1.32687795048244,1.75380354101505,0,0,3.85529716229138,0.30982349809975,0.281695602532241,0,0,3.92338156629375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,2.15361907373044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.477890301491107,1.79921244865442,0.310525913752519,0.414706207840855,0,0.521745061811734,0.300515217994437,0,0,0.363697318405119,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60698544745092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p8@IL8 | |||
}} | }} |
Latest revision as of 14:26, 18 September 2015
Short description: | p8@IL8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IL8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 202bp_to_AJ227913_5end |
EntrezGene: | IL8 |
HGNC: | 6025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data